Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00016 CTCTCACTCGCGTGTAAGAAATACGAATCTATCACCTCACACTCCACATGCGGAATCAAATTCTTTGTACCAAGACCCATCGTTCATTGTTATTCACTGCAACAGAAATAAGAAAAGGAAAGAAAAAAAATTCACAGTGAAGATCTTCCATTGTTGAGCCCTGAAAGTGGAAAAAAGGCAACCAAAAAAAGGTTCTTCAACACCCATTATCGCTCAAATCAAACGAGTTGAAGAGCAAAGGAATCTCCCCCCTTTCAATGACAGTGAGATGATTTTTTGCCCCATTTGAACTTATTTTGCCTCTTGGATCAATTTCACTGCATAATACAACTACCCATTTTCGGATTTTAGGTTGGAGGTTTGAAGCAGTTTGATCTTTTGTCTCTGTAATTTCTTTTGCTGCTGTTGCTGTTTATTTGAGAGGTGTGTTTTAGGAGATCTTATAATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCCTCTTTTGGCCTTGGCCGAGAGAAGAGGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTATTGTCTGAGCTTGATGATGATAGCTGCAACAGCACTGGCTCAGATGCCCCTTCGTCAGTATCGCAAGACCGGATGATCATTGTTGGGAATCAGCTCCCTATTCGAGCGAATCGAAACGAGAATGGAGATTGGGAGTTTAGTATGGATGAGGATTCACTTCTTTTACAGCTTAAAGATGGACTTGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTCAGAGAGGAGGTTGATCCAAGGGAGCAAGATGATGTTGCACAAACTCTTTTGGACCGATTCAAGTGCGTCCCGACGTTCCTTCCTCCGGAACTTTTTAGTAAATTTTATCATGGATTCTGCAAGCAACATTTATGGCCACTGTTTCACTATATGCTTCCCCTGTCACCGGATCTTGGTGGCCGATTTGATCGGTCTCTTTGGCAAGCGTATCTTTCTGTGAATAAGATATTTGCTGATAAAGTCATGGAAGTGATTAGTCCTGATGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACGTTTTTGAGGAAGAGGTTTAACAGGGTGAAGCTTGGATTTTTCCTGCATAGTCCATTTCCTTCGTCTGAGATTTATCGAACCCTTCCTGTCAGAGATGAACTTCTTCGGGCACTATTGAACTCTGATCTTATTGGCTTCCACACGTTTGATTATGCTAGGCATTTTTTATCTTGCTGCAGCAGAATGCTTGGTCTGTCTTATCAATCTAAGCGAGGTTACATCGGGCTTGAATACTATGGTCGTACTGTGAGCATTAAGATTCTTCCTGTCGGTATTCATATAGGCCAGCTCCAAAATGTTCTGAATCTCCCTGAGACTGTATCCAAAGTCGCAGAACTGCAAGATCGGTTCAAGGGTCAAACTGTTTTGCTTGGGGTCGATGATATGGACATATTTAAGGGGATCAGCCTGAAACTTTTGGCATTTGAACAATTGCTCCGACAACATCCTGAGAGATGGGGTAAAGCTGTGTTAGTACAGATTGCGAACCCTGCAAGAGGCAGAGGGAAAGATGTACAGGAGGTTGTGGCTGAAACTACTGCGACAGTGGATAGAATTAATTCAACATTCAGAAGGCCAGGATACGAGCCTGTGGTTTTGATAAACACTCCCTTGCAGTTTTATGAGCGAATCGCTTACTATGCAATTGCTGAGTGCTGCCTTGTTACTGCAGTGAGAGATGGGATGAATCTTATACCTTACGAGTATATTATATGTCGGCAAGGCAATGAGAAGCTTGACGATGTTCTCGGGCTAAATCCATCAACTGCAAAGAAGGGCATGTTAGTGTTGTCTGAGTTTATTGGGTGTTCCCCATCCCTCAGTGGAGCTATTCGGGTTAACCCATGGAATATTGAAGCTGTCACTGAAGCAATGGATTCTGCCCTGGTAATCCCCGAGGCAGAAAAGCAATTGCGACATGAAAAGCATTATAGGTATGTTAGTACACATGATGTTGCATATTGGGCACGCAGCTTTTTGCAGGATCTAGGCAGGGCCTGTAGAGACCATTCAATGAGGAGGTGCTGGGGTATAGGTTTTGGTTTAGGATTTCGAGTTATTGCGCTGGATCCAGATTTTAGGAAGCTTTCAGTTGATCATATTGTTTCAGTGTATAAGAGAACGTGCCACCGAGCAATTTTGTTAGATTATGATGGTATCATGATGCTTCCCGGATCAATTAGCATGAATCCAACTTCAGAAGCCCTTGGAATCTTGAACAATTTGTGTAAAGATCCTAAAAATGTTGTGTTCCTTGTTAGTGGAAAGGACCGCAAAACTCTGACCGAATGGTTTTCACCTTGTGAAAAGCTTGGACTAGCTGCAGAACATGGTTTTTATCTCAGGCCAAATCATACTGCAGATTGGGAGACATGTGTAGCTGTGACCGATTTCGACTGGAAACAGATTGCAGAACCTGTTATGCAATTGTATACCGAGACAACTGATGGCTCTACAATCGAAACTAGAGAGAGTGCACTTGTTTGGAACTACCTTTATGCGGATCCCGATTTCGGGTCGTGCCAGGCCAAGGAACTTCTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGCATTGTAGCAGAATATCTCTTGCAAACAATGAGGGAGAAGGGAATGCTTCCTGATTTTGTTCTATGCATTGGAGACGACAGGTCAGACGAGGATATGTTCGAGGTGATAATGAATGCAAAAGCCACCCTTTCTCCTGGTGCCGAAGTGTTCGGTTGCACCGTTGGCCAGAAACCGAGCAAGGCCAGGTATTATTTGGAAGACACACATGAAATCTTGAGAATGTTACAAGGTCTTACCCATGCATCCGAGCACGCGACTAGAGCTGCTCCGCAGACGACGGCTCGTAGAGTGGTAATTGCAGAGAGTAAATAAGTAGGAATCTCCACCAATTCTCTCCTCAAAACCTGAAAAGGGTCTTTGTTATTGGGTGTGTATATGAAGTTGACTTTGTGCAAAAGTCTGTTATTGCTATTTTGAGGGGTCTGTGAAAGGATCAAATATTTTGATGTTTTATTATTGGTGCAATTCTTCTGTCCATGGCCATTTGAGTTAGGAGAAAACTGAATATTTCTGCTGTTGTTGCATTAATGTATGTAGTTTTGACTGTGCTAATGGGTGGAATAGTGTAATGCATTTATCTGTTTCTTCTCAA 3320 42.86 MVSRSYSNLLELASGGCSPSFGLGREKRRLPRVATVAGVLSELDDDSCNSTGSDAPSSVSQDRMIIVGNQLPIRANRNENGDWEFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQDRFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVVAETTATVDRINSTFRRPGYEPVVLINTPLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDDVLGLNPSTAKKGMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPDFRKLSVDHIVSVYKRTCHRAILLDYDGIMMLPGSISMNPTSEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGFYLRPNHTADWETCVAVTDFDWKQIAEPVMQLYTETTDGSTIETRESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEYLLQTMREKGMLPDFVLCIGDDRSDEDMFEVIMNAKATLSPGAEVFGCTVGQKPSKARYYLEDTHEILRMLQGLTHASEHATRAAPQTTARRVVIAESK 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 300470 304835 + XM_039047976.1 Bhi11g00016 48728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00016 864 CDD HAD_TPP 595 831 - -
Bhi11g00016 864 Gene3D Glycogen Phosphorylase B; 315 531 - -
Bhi11g00016 864 Gene3D Glycogen Phosphorylase B; 56 314 - -
Bhi11g00016 864 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 596 798 IPR006379 -
Bhi11g00016 864 SUPERFAMILY HAD-like 594 839 IPR036412 -
Bhi11g00016 864 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Bhi11g00016 864 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 846 IPR001830 GO:0003824|GO:0005992
Bhi11g00016 864 TIGRFAM T6PP: trehalose-phosphatase 593 840 IPR003337 GO:0003824|GO:0005992
Bhi11g00016 864 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 846 - -
Bhi11g00016 864 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Bhi11g00016 864 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Bhi11g00016 864 Gene3D - 723 854 IPR023214 -
Bhi11g00016 864 Gene3D - 593 710 IPR023214 -
Bhi11g00016 864 Pfam Trehalose-phosphatase 597 829 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00225 Bhi-Chr7:9876832 Bhi11g00016 Bhi-Chr11:300470 0 dispersed
Bhi07g00226 Bhi-Chr7:9876832 Bhi11g00016 Bhi-Chr11:300470 0 dispersed
Bhi09g03567 Bhi-Chr9:89514745 Bhi11g00016 Bhi-Chr11:300470 1.82E-143 dispersed
Bhi09g03568 Bhi-Chr9:89522830 Bhi11g00016 Bhi-Chr11:300470 1.82E-143 dispersed
Bhi11g00016 Bhi-Chr11:300470 Bhi07g01687 Bhi-Chr7:46946013 0 dispersed
Bhi11g00016 Bhi-Chr11:300470 Bhi11g00017 Bhi-Chr11:300470 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00016 K16055 - csv:101207192 1712.2