Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00025 GCTTCAGTTTCGAAAATGCTACGGCTAGGGTTTTTATTACAGGAAACTATGTGGAGTTTCTTGATTGATCGAATGAATATGGAATTTCTATTGGGAAAAAGGGGTTTAATGGATGGATAGAAAGAATTGGGAGAATTTAATATTTTGATTCTTTTCTCTCTTCAGCTATGGATACTACTACTCTGCGCAATTCTCTCAATCCCATTAAACGTCTCAAAGAAGAATTCGTCAGCAACTTGACTGGATCTTCCATGATCGAAATCGCAGCGCTTTCCACAATTATACCTATTCTGGTACTTCTTCGCCACTCATTCAACTCCAGCAATGTGATTGGTATGTCTCTCAGAGCTGTTCTTGATCATACTGCTGCAAATGCTTCACTGAAGAAAAGTGATGGTCTAGTTATTCGCTCAAAGAGCTTGAAGCGATATTTAGCTGCAATTGCTGTAGATTTTCTTATTATTGTGATTCCCACTCTCTTGTTTTTCACTGTTCTAGCAGATTGGTCATGTTTATGTGCGATTTTATTGGTCTTGCTATTATTGTTATTGATTGCAGCCAAAGGAATGCTCAATCATTCTCCAACACGGGAATCAGGAAACCAAAGTCTAAGGGCAAATATTTCATCTTTTAGGGTTGTTGTGATGATCACAACATGCTTGTGTATATTAGCTGTTGATTTCAGAATATTTCCTAGAAGATATGCTAAGACAGAGACTTACGGTACAAGTCTGATGGATCTTGGTGTCGGTTCATTTGTGCTGGCAAATTCCTTAGTTTCTCGGCAGGCACGTAATGTCTCATCCACAAATCGGAAAGGTGCATTAAAATCTGTTTTTCCTCTTCTCATTCTAGGATTTATTCGTCTGATAACTACTTCTGGTGTAGATTATCAAGTCCATGTGGGAGAATATGGAGTTCACTGGAATTTCTTTTTCACACTTTCTGCTGTATCAATTCTTAGCACTGTCATTAATATTCCTCCACAATATTCTGGAATTTTTGGTTCAACAATTCTAGTCGGGTACCAGTATTGGTTGATATATGGTCTAAATACTTATCTTCTTTCAAATCAGAGGGGATCAGATATAATCAGCCAAAACAAGGAAGGACTTTTTAGCATATTTGGGTACTGGAGTATTTATCTTATTGGTGTGCAATTAGGGAACTCTCTATTCTTTGGAAAAAATTCATCTGCTACACTAGGGAGCAAGAGAAGAGCAAGGATAATAGTTTGGATTCTTGCTCTTTTCTTTTGGATGACAACCTTGCTTCTGGATTCCTATGTTGAGCGAGTTTCTCGTAGAATGTGCAACCTGGCATATGTCACTCTGGTATTGGCACAAAATTTACAGGTTTTGGCAATATTAATGCTTTCTGGTTATGTTGCTGGGAATGAAACTTCAGTTCTTGAAGAAGCATTAAACAGCAATTTACTGGCAGCATTTCTTTTGGCAAACTTGCTCACTGGACTAGTTAACTTATCAGTCGATACCCTGTCCACGTCATCCATCACGGCTTTACTTATTTTGCTTGTTTATGCATTTATTTTATCCATTGCAATGGGATTGGCCAATTTCAATGGCATTAGGTTGAAGTTTTGGTAGGTAAAACAAAATGAATTTGATTGTGATAATGACACGTTCCTTCTATGTAACTTTAAAACAACAAAATATCATCAGACAAATTTTGTTAACTACTTTATGCTA 1709 37.1 MDTTTLRNSLNPIKRLKEEFVSNLTGSSMIEIAALSTIIPILVLLRHSFNSSNVIGMSLRAVLDHTAANASLKKSDGLVIRSKSLKRYLAAIAVDFLIIVIPTLLFFTVLADWSCLCAILLVLLLLLLIAAKGMLNHSPTRESGNQSLRANISSFRVVVMITTCLCILAVDFRIFPRRYAKTETYGTSLMDLGVGSFVLANSLVSRQARNVSSTNRKGALKSVFPLLILGFIRLITTSGVDYQVHVGEYGVHWNFFFTLSAVSILSTVINIPPQYSGIFGSTILVGYQYWLIYGLNTYLLSNQRGSDIISQNKEGLFSIFGYWSIYLIGVQLGNSLFFGKNSSATLGSKRRARIIVWILALFFWMTTLLLDSYVERVSRRMCNLAYVTLVLAQNLQVLAILMLSGYVAGNETSVLEEALNSNLLAAFLLANLLTGLVNLSVDTLSTSSITALLILLVYAFILSIAMGLANFNGIRLKFW 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 375297 382170 + XM_039048181.1 Bhi11g00025 48737

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00025 479 PANTHER PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN 1 478 IPR009447 GO:0006506|GO:0016021|GO:0016746
Bhi11g00025 479 PIRSF PIG-W 9 479 IPR009447 GO:0006506|GO:0016021|GO:0016746
Bhi11g00025 479 Pfam GWT1 311 438 IPR009447 GO:0006506|GO:0016021|GO:0016746
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00025 K05283 PIGW; glucosaminylphosphatidylinositol acyltransferase [EC:2.3.-.-] - csv:101206318 788.489
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00023 Bhi-Chr11:375130 Bhi11g00025 Bhi-Chr11:375297 0 dispersed
Bhi11g00024 Bhi-Chr11:375130 Bhi11g00025 Bhi-Chr11:375297 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g681 Blo02g00988 . . Bda08g00633 Bpe05g00525 . . . Cmo06g00651 . . . . . . . . Bhi11g00025 . . . . . . Cla10g00147 Cam10g0143 Cec10g0152 Cco10g0152 Clacu10g0146 Cmu10g0993 Cre10g0404 . . . . Lsi07g01182 . . Cme06g02460 . . . . . . Bma05g00710 . . . . Cma06g00644 . Car06g00573 . . . . . . . . . . . . . . . . . . Csa03g00156 Chy06g02153 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005151 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 4 4 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g00025 Bhi_Chr11 FPKM 0.0 0.772462 0.0 0.457166 4.293584 2.350233 2.48651 0.0 0.161377 0.0