Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00041 ATAATATATGTTGTGGGATAATAGTACAAAGCTTTTTGAAAGTCTATTTTAAGGCCCCCTACCCTTCCATATTCTATCCCCAAGAAACTCAACCACTTCTCTCCAATGGAGGATCCTCTTCACAGATTCCAATTTCACTCTCAATCTTCTTCATCTTCTTCGTCTTCTTCTTCTTCATCAGATATCAAAAATTCCATCAAAGAAAGAAACTCCAAGAAACTTAAACTCGTAAACGACGGCACACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCTACCCCGGAAATGGCCGCCAGAGCTCACGACGTCGCCGCTAGAACTATCAAAGGTCATTCTGCTTACCTTAACTTCCCTGAATTGGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCACCTAAAGACATTCGAGCCGCCGCCGCTAAAGCCGCCTCCTTTACTAATCTCAATCTCCACGATGATGAACATAACGCCGCCGCGAAATCTGACCTGAATCTCAATCGCTCTCCTTCTTCCGCCGTCGCTGCCAAATCCTCCGGTGATATTGACGATCCTTTCTTCGATCTCCCTGATCTGTTCCTTGATGATCCTAATCATCAAATTGATACATTCTGTTTCTCGCAATTTCTTCCGATTGACGGTTTCGACTCTGTTTTTACCCGGCCGCCGTCGCCGTCTGATTATTTCGCTTACAGAGGTAGCATACTCTAGTTCGCCGCCGCTATCGCCTCCATTTCAAACGGCTGCAGATTTTGATTTTGATTTTGATTTTGATTTTTTTTTTTTTTTTTGAAAACCCTAATACCAAATCAGGAAATTTTCCTCTTTTTTTCTTTTTTACTTTTCTAATTTCATCCTCGGATTTATTGTTCTTATTTTTAAATTATAGTAATTTAGAATTTGTTCTTACTATTTTCGAACTTAAATTACAATCATTTGAAAATTTTAATAATAAAGCTGAGGATGAAATTAATAAAAAAAAAAAAAATGAAATTTGTCATTTTCTGTTGTACATGTTTTTTTCTTCTTATTCTCTCGGTGGCATTATGTGTAATAAGTTTCTTACAGTTTCCACATTTGTAAATTTATATGTATTCTAGTTAATTTTTTTCCCTACATTATGTCCATTATAACAA 1202 37.94 MEDPLHRFQFHSQSSSSSSSSSSSSDIKNSIKERNSKKLKLVNDGTHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFTNLNLHDDEHNAAAKSDLNLNRSPSSAVAAKSSGDIDDPFFDLPDLFLDDPNHQIDTFCFSQFLPIDGFDSVFTRPPSPSDYFAYRGSIL 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 832360 833561 - XM_039049287.1 Bhi11g00041 48753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00041 223 MobiDBLite consensus disorder prediction 8 29 - -
Bhi11g00041 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 14 193 - -
Bhi11g00041 223 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Bhi11g00041 223 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Bhi11g00041 223 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Bhi11g00041 223 CDD AP2 50 108 IPR001471 GO:0003700|GO:0006355
Bhi11g00041 223 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Bhi11g00041 223 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
Bhi11g00041 223 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Bhi11g00041 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 193 - -
Bhi11g00041 223 Pfam AP2 domain 48 99 IPR001471 GO:0003700|GO:0006355
Bhi11g00041 223 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02579 Bhi-Chr9:70068021 Bhi11g00041 Bhi-Chr11:832360 5.15E-42 dispersed
Bhi11g00041 Bhi-Chr11:832360 Bhi12g02208 Bhi-Chr12:70602665 7.68E-38 dispersed
Bhi11g00041 Bhi-Chr11:832360 Bhi06g02000 Bhi-Chr6:54954420 3.85E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2278 PF00847 AP2 4.90E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00041 - - csv:101222736 323.168