Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g00041 | ATAATATATGTTGTGGGATAATAGTACAAAGCTTTTTGAAAGTCTATTTTAAGGCCCCCTACCCTTCCATATTCTATCCCCAAGAAACTCAACCACTTCTCTCCAATGGAGGATCCTCTTCACAGATTCCAATTTCACTCTCAATCTTCTTCATCTTCTTCGTCTTCTTCTTCTTCATCAGATATCAAAAATTCCATCAAAGAAAGAAACTCCAAGAAACTTAAACTCGTAAACGACGGCACACATCCTACCTATCGCGGCGTTCGAATGCGACAATGGGGAAAATGGGTTTCCGAAATCAGAGAACCAAAGAAGAAATCCAGAATTTGGTTAGGCACATTTTCTACCCCGGAAATGGCCGCCAGAGCTCACGACGTCGCCGCTAGAACTATCAAAGGTCATTCTGCTTACCTTAACTTCCCTGAATTGGCTCATCGTCTCCCTCGTCCTGCTAGTTCTTCACCTAAAGACATTCGAGCCGCCGCCGCTAAAGCCGCCTCCTTTACTAATCTCAATCTCCACGATGATGAACATAACGCCGCCGCGAAATCTGACCTGAATCTCAATCGCTCTCCTTCTTCCGCCGTCGCTGCCAAATCCTCCGGTGATATTGACGATCCTTTCTTCGATCTCCCTGATCTGTTCCTTGATGATCCTAATCATCAAATTGATACATTCTGTTTCTCGCAATTTCTTCCGATTGACGGTTTCGACTCTGTTTTTACCCGGCCGCCGTCGCCGTCTGATTATTTCGCTTACAGAGGTAGCATACTCTAGTTCGCCGCCGCTATCGCCTCCATTTCAAACGGCTGCAGATTTTGATTTTGATTTTGATTTTGATTTTTTTTTTTTTTTTTGAAAACCCTAATACCAAATCAGGAAATTTTCCTCTTTTTTTCTTTTTTACTTTTCTAATTTCATCCTCGGATTTATTGTTCTTATTTTTAAATTATAGTAATTTAGAATTTGTTCTTACTATTTTCGAACTTAAATTACAATCATTTGAAAATTTTAATAATAAAGCTGAGGATGAAATTAATAAAAAAAAAAAAAATGAAATTTGTCATTTTCTGTTGTACATGTTTTTTTCTTCTTATTCTCTCGGTGGCATTATGTGTAATAAGTTTCTTACAGTTTCCACATTTGTAAATTTATATGTATTCTAGTTAATTTTTTTCCCTACATTATGTCCATTATAACAA | 1202 | 37.94 | MEDPLHRFQFHSQSSSSSSSSSSSSDIKNSIKERNSKKLKLVNDGTHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRLPRPASSSPKDIRAAAAKAASFTNLNLHDDEHNAAAKSDLNLNRSPSSAVAAKSSGDIDDPFFDLPDLFLDDPNHQIDTFCFSQFLPIDGFDSVFTRPPSPSDYFAYRGSIL | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 832360 | 833561 | - | XM_039049287.1 | Bhi11g00041 | 48753 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g00041 | 223 | MobiDBLite | consensus disorder prediction | 8 | 29 | - | - | |
Bhi11g00041 | 223 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 | 14 | 193 | - | - | |
Bhi11g00041 | 223 | Gene3D | AP2/ERF domain | 49 | 107 | IPR036955 | GO:0003700|GO:0006355 | |
Bhi11g00041 | 223 | PRINTS | Ethylene responsive element binding protein signature | 50 | 61 | IPR001471 | GO:0003700|GO:0006355 | |
Bhi11g00041 | 223 | PRINTS | Ethylene responsive element binding protein signature | 72 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Bhi11g00041 | 223 | CDD | AP2 | 50 | 108 | IPR001471 | GO:0003700|GO:0006355 | |
Bhi11g00041 | 223 | ProSiteProfiles | AP2/ERF domain profile. | 49 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Bhi11g00041 | 223 | SUPERFAMILY | DNA-binding domain | 49 | 107 | IPR016177 | GO:0003677 | |
Bhi11g00041 | 223 | SMART | rav1_2 | 49 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Bhi11g00041 | 223 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 14 | 193 | - | - | |
Bhi11g00041 | 223 | Pfam | AP2 domain | 48 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Bhi11g00041 | 223 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi09g02579 | Bhi-Chr9:70068021 | Bhi11g00041 | Bhi-Chr11:832360 | 5.15E-42 | dispersed | |
Bhi11g00041 | Bhi-Chr11:832360 | Bhi12g02208 | Bhi-Chr12:70602665 | 7.68E-38 | dispersed | |
Bhi11g00041 | Bhi-Chr11:832360 | Bhi06g02000 | Bhi-Chr6:54954420 | 3.85E-47 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2278 | PF00847 | AP2 | 4.90E-13 | CL0081 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g00041 | - | - | csv:101222736 | 323.168 |