Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00049 TCTACTTGGACCACAACTCTTCTTCTTCCTTCTTCCTTCTCTCTAAAAACTCAAGAAATTTCCATAGAACAACAATTATGATGGCTGCAAAAGATGATCATAATCTTGGTTTAAGCCTTGGATTGAGCTTCGATTCTCATCATTTACAGCTCAATCTCATGCCTTCTTCTTGGAATAACGACGCTTCTTCAGATCGGACATCGGAAACTGGCAGATCGCTTCTCCGAGGCATAGATGTGAACCGGATGCCTCCGTCGTCTTCGGCAGCGGATTGTGAAGAGGAGGCGGCGATGTCGAGCCCCAACAGTACGGTTTCGAGTGTGAGTGGGAAACGGAGTGAACGAGAGATGAACGGTGAGGATCTGGACGGCGATAGAGCTTGTTCTAGAGGAATTAGTGATGAAGAAGATGGAGAAACTTCTAGAAAAAAGCTTCGGCTTACTAAAGATCAGTCCGCCGTCTTGGAAGAAAGCTTCAAAGAACACAATACTCTCAATCCTAAGCAAAAATTGGCGTTGGCGAAACAGTTGGGTCTCCGGCCGAGACAAGTGGAAGTTTGGTTCCAAAACAGAAGGGCAAGGACAAAATTGAAGCAAACGGAAGTAGATTGCGAGTTTCTGAAGAGATGTTGTGAGAATCTAACGGAGGAGAATAGGCGGTTGCAAAAAGAAGTACAAGAACTGAGAGCACTGAAACTTTCCCCACAATTCTACATGCACATGACCCCACCCACCACTCTCACCATGTGCCCCTCATGTGAGCGAGTTGCGGTCCCACCCTCCACGTCAGCCCAGCCTACAGTCACACGAATGGGCCAGGCTCAATCTCAGGCCCACCACGCTCGGCCCATCCATATCAACCCCTGGGCCTCCGCCATCCCGGCCCGGCCCTTCAACGCCCTCCACCCTCGCTCGTAAATACCCCTTCCCCACCGACGAGGGCAACTCCGTCTTTTCACCTACGTTAGGATCCGGTTGTTGGGCCAGGATTTGGTGGGCCTTTGTGTTTTGTAATGTTCGGCCCATCTTATTATAATTAGGGTTGAGTAGTTTAATTTGTGTTAGCGGCAAGCAATACCCTTTTTTTCTTTTTCTTTGTAATATTTTAGGGAAAATGAAGTGGGGGAAAAAAAAAATAATTATATATATATGGGGTTGGAAGGTGATAGAAAAAGGGGTTTTGAGTTGTAAAGTGAAGTATGAGATGCCTAATTTAATTTAATTTTTTTTT 1230 46.26 MMAAKDDHNLGLSLGLSFDSHHLQLNLMPSSWNNDASSDRTSETGRSLLRGIDVNRMPPSSSAADCEEEAAMSSPNSTVSSVSGKRSEREMNGEDLDGDRACSRGISDEEDGETSRKKLRLTKDQSAVLEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAVPPSTSAQPTVTRMGQAQSQAHHARPIHINPWASAIPARPFNALHPRS 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 975106 977143 + XM_039050232.1 Bhi11g00049 48761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00049 279 PRINTS Lambda-repressor HTH signature 143 152 IPR000047 GO:0003677
Bhi11g00049 279 PRINTS Lambda-repressor HTH signature 152 168 IPR000047 GO:0003677
Bhi11g00049 279 Gene3D - 122 168 - -
Bhi11g00049 279 SMART halz 172 215 IPR003106 GO:0006355|GO:0043565
Bhi11g00049 279 Coils Coil 171 208 - -
Bhi11g00049 279 MobiDBLite consensus disorder prediction 31 119 - -
Bhi11g00049 279 SUPERFAMILY Homeodomain-like 105 173 IPR009057 -
Bhi11g00049 279 MobiDBLite consensus disorder prediction 31 45 - -
Bhi11g00049 279 Pfam Homeodomain 116 170 IPR001356 GO:0003677
Bhi11g00049 279 ProSitePatterns 'Homeobox' domain signature. 147 170 IPR017970 GO:0000981|GO:0006355
Bhi11g00049 279 PANTHER - 6 270 - -
Bhi11g00049 279 Pfam Homeobox associated leucine zipper 172 206 IPR003106 GO:0006355|GO:0043565
Bhi11g00049 279 CDD homeodomain 116 173 IPR001356 GO:0003677
Bhi11g00049 279 ProSiteProfiles 'Homeobox' domain profile. 112 172 IPR001356 GO:0003677
Bhi11g00049 279 SMART HOX_1 114 176 IPR001356 GO:0003677
Bhi11g00049 279 MobiDBLite consensus disorder prediction 87 119 - -
Bhi11g00049 279 MobiDBLite consensus disorder prediction 71 86 - -
Bhi11g00049 279 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 6 270 - -
Bhi11g00049 279 Pfam HD-ZIP protein N terminus 2 90 IPR006712 GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00555 Bhi-Chr1:9944280 Bhi11g00049 Bhi-Chr11:975106 1.51E-112 dispersed
Bhi11g00049 Bhi-Chr11:975106 Bhi11g02524 Bhi-Chr11:68248543 9.00E-66 dispersed
Bhi11g00049 Bhi-Chr11:975106 Bhi03g01084 Bhi-Chr3:22004589 2.54E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2280 PF04618 HD-ZIP_N 4.00E-20 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00049 K09338 - csv:101223208 463.766