Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00051 CGTCGATTGTCCTTAGAGCATTTGCCGGAGTTCTTCTCTCTCTACTTTGTTTCTCTCTCTCTCATCAATCGGTTTCAAAGAATGTTAAGCAAATGGTTGGAGTAGAATCCAATCCATGGTAGCTTTTCAATCCCCAAAGCAAAATCTAGGGTTCGGTATTCGAAATATTTCATCGATTTTTCCCAATTTCGTTCTTCCCCAAATCGATCGTCGTTCCTGTTGGTCAATCGCAGCTTCCATCAACTTCTTCTTTTCCGGCTGCCGGGACGGTGGCGACTTTTGGGCTTTTTATTTGAGGCTATGTATATTGAGGAACTGAATGAAGGGGAGTTGGAGAATGGGGAAGAGGGAAATTCAGGTGTCATTGTTAGTAATCTGGAGAGTCAGAGCATTCTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTACTTTTCTACCCGACTTTGCTTTACAATGTTTTTAGAAATAAGCTTCAGACGGAGTTTCGTTGGTGGGACAAGGTTGACGAGTTTATATTGTTAGGTGCTGTTCCATTCCCTGCTGATGTTCCCCGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACTTTGGTTCCTTCAACTCTATATCGTGATCATGGAATTGATCATCTGACCATTCCAACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTGAATTTCATCCACAAAAATGCATCACATGGACAGACTACATATGTTCATTGTAAAGCTGGACGAGGGCGTAGCACAACCATTGTTATTTGCTATTTGGTGCAATACAAGCAAATGACGCCAGATGAAGCTTATAAACATGTGAAATCAATCAGGCCAAGAGTGCTTTTAGCATCATCACAGTGGCAGGCTGTCCTGGACTTCTACCACCTAATTGTGCAGAAGGATGTTTCCTTCTGTCACATAGATGATCTAGGAAAGAAAGTATCAGGATCATCGCATGATCTTATCACATTTGATGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTTGATGGATATGACCAAAGCATCAGCCAAAGTGACATGGGTGATATCTGGGCAGATTTAAGCGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGAATCTCTTGTTTGTGGCTCAGCTATCGAGCAAAACACCATAGCCAGAAGATTTCAGGAGATGATCTAGGTGTGGGGAAGGGCTGTTCACTTAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAAACCAACTCAGAGGTCACAAGTTTTCTGTACTTACCTCATATATATGATAAAATATAGCAAAATATGTACCAGGCAGAATTGAAATTGTTAATACGTATCTATAAGTGAGATTGTACTGTCCAATATGTTTTCA 1435 41.81 MYIEELNEGELENGEEGNSGVIVSNLESQSILRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFILLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPSTLYRDHGIDHLTIPTRDYCFAPLLSDICIAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRPRVLLASSQWQAVLDFYHLIVQKDVSFCHIDDLGKKVSGSSHDLITFDDSSVVVVKESDLDGYDQSISQSDMGDIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLSATHLEGFSVDIHVY 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1003592 1008131 + XM_039048006.1 Bhi11g00051 48763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00051 333 CDD PTPMT1 68 210 IPR044596 GO:0004721
Bhi11g00051 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Bhi11g00051 333 Gene3D Protein tyrosine phosphatase superfamily 68 218 IPR029021 -
Bhi11g00051 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Bhi11g00051 333 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 333 - -
Bhi11g00051 333 Pfam Dual specificity phosphatase, catalytic domain 108 210 IPR000340 GO:0008138|GO:0016311
Bhi11g00051 333 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Bhi11g00051 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 62 214 IPR029021 -
Bhi11g00051 333 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Bhi11g00051 333 PANTHER - 1 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01678 Bhi-Chr6:47659137 Bhi11g00051 Bhi-Chr11:1003592 9.47E-99 dispersed
Bhi11g00051 Bhi-Chr11:1003592 Bhi12g01805 Bhi-Chr12:57801700 3.57E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00051 - - csv:101222975 616.305