Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00058 TCTTCAATTTCATTCACATTCTGATCTCTCTCTCTCTCCTTTTTTAATTTTTAATTTCTGTTTAGGGAAAATTTTGATTTTTGGTTGAAATTAAAATGATGTACGGACAGAGTAATGGCTGTGAATCCGATTTTGTTCTTCTGGAAACCATACGGCGCCATTTATTGGGAGAATCCGACGCTTACCGTTGTGGGAATTTCGCCCTTGCCGGAACCGCCTCCCCGGTTTTCTGCCGGACCGCCAGTTTCGGCAGTTTGTACCCTTGTTTGACTGAAAATTGGGGCGATTTGCCTCTCAAAGAGGATGATTCCGAAGACATGGTTCTCGCCGGCGTCCTCCGTGATGCCGTCAGCGTCGGTTGGGTTCCGTCGCTCGGCTCTTCCCCGTCGGAAACTTTCAATTTTGGATTCTCCGATGTAAAGCCGGAGCCGGAGATTCTCCCGCCGGTGAACATATTGCCGGAAGTTAAGATTCCGGCGGCGGCGGTGCCGTTACCGGCGGTTGTTCCGGCTAAAGGGAAGCATTACCGGGGTGTTCGGCAGCGGCCGTGGGGGAAGTTTGCGGCGGAGATTCGAGACCCGGCGAAAAATGGAGCCCGGGTTTGGCTTGGAACGTTTGAGACGGCGGAGGATGCAGCGCTTGCTTATGACCGCGCCGCTTATCGGATGCGTGGCTCGAAAGCTCTTCTCAATTTCCCACTTCGAGTTAATTCAGGCGAACCCGATCCGGTTAGAGTGACGTCGAAGCGGTCATCGCCTCGATCATCGCCGGAGCCTATTTCGTCGTTGTCGTGGGTAGAGAGTGGGTCCCCTAAGCGACGGAAGAAGGCGGACGGCACGGCGGTGGCACCTTCTCTAGCTGCGCCGGAGTTGATCCAAGAGGAGGTGGGGACCAATGCATTGCAAGTGGAAGCTGACGTGGCAAAGTGTACAAGTGGTGAGCAATGATTGGGGGATTAGTGGTGTATGTGAAAGAAGGGAAAAATATGATTGGGGGATTAGCACTTGAGATTAAAAAAAAAAAAAGAAAAAAAAAACTCTGTAATTATTTTTTGAGGACATATTTTAGGGATAGGATTGGTAGATTTTCTTTGGAGTTTCAAAATTTTGGGATTCTTCAAAATATAAAATTTCCCAAAAAAAAAAAAAAAAAAAGAGAGAGTGGAGAAGAAGTATTGGTACATAATGGGGTGGTTGGATTTGCTAAAGCAAATTTGTTTATTGTTTTAAAAAAAATATCTTTTGAATGGAATTTTTCTATTTTTTTTCA 1269 46.89 MMYGQSNGCESDFVLLETIRRHLLGESDAYRCGNFALAGTASPVFCRTASFGSLYPCLTENWGDLPLKEDDSEDMVLAGVLRDAVSVGWVPSLGSSPSETFNFGFSDVKPEPEILPPVNILPEVKIPAAAVPLPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSKALLNFPLRVNSGEPDPVRVTSKRSSPRSSPEPISSLSWVESGSPKRRKKADGTAVAPSLAAPELIQEEVGTNALQVEADVAKCTSGEQ 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1237477 1238745 + XM_039050290.1 Bhi11g00058 48770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00058 283 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
Bhi11g00058 283 MobiDBLite consensus disorder prediction 212 236 - -
Bhi11g00058 283 CDD AP2 142 201 IPR001471 GO:0003700|GO:0006355
Bhi11g00058 283 PRINTS Ethylene responsive element binding protein signature 144 155 IPR001471 GO:0003700|GO:0006355
Bhi11g00058 283 PRINTS Ethylene responsive element binding protein signature 167 183 IPR001471 GO:0003700|GO:0006355
Bhi11g00058 283 PANTHER DNA-BINDING DOMAIN 41 253 IPR044808 GO:0003700|GO:0009873
Bhi11g00058 283 SUPERFAMILY DNA-binding domain 143 203 IPR016177 GO:0003677
Bhi11g00058 283 MobiDBLite consensus disorder prediction 208 250 - -
Bhi11g00058 283 Gene3D AP2/ERF domain 142 204 IPR036955 GO:0003700|GO:0006355
Bhi11g00058 283 Pfam AP2 domain 143 193 IPR001471 GO:0003700|GO:0006355
Bhi11g00058 283 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Bhi11g00058 283 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 41 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00337 Bhi-Chr3:7075194 Bhi11g00058 Bhi-Chr11:1237477 6.20E-28 dispersed
Bhi03g00338 Bhi-Chr3:7077120 Bhi11g00058 Bhi-Chr11:1237477 3.92E-35 dispersed
Bhi09g01161 Bhi-Chr9:27424050 Bhi11g00058 Bhi-Chr11:1237477 5.20E-29 dispersed
Bhi11g00058 Bhi-Chr11:1237477 Bhi12g00515 Bhi-Chr12:16495962 3.15E-103 dispersed
Bhi11g00056 Bhi-Chr11:1103356 Bhi11g00058 Bhi-Chr11:1237477 6.40E-31 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2282 PF00847 AP2 1.20E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00058 K09286 - csv:101203663 456.832