Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00109 ATGGTTATTGAAAAATTAAAACCTGTGAATGGCTTGAATAAAGTGAAGAAATGGATAGAAGATCGCGGATTGAATCGTGCTGCAGTTACAAATTCTTCTCGAACGAATGCCGAGCTCGTGATCTCCATGCTTGGCCTTACAGGTTTCTTTGAGGTTGTTATCATAGGTGATGAATGTGAGCATGCCAAGCCACATCCAGAACCATGCTTAAAGGCTTTGGAAGATTTTGTAACAGGGATCAAACCTGGAGTGATAGCCGAGATGCCTCTCATCGATATCACCACGAGAGATCCCGAACAAGCTTCTGCCATCCTCATAAAGGATTACGAGGATCCAAAATTGTGGGCAGTTTTGGACAAACTCGACAGGAAAGGAGATACCGTTGAGAATGCATGA 396 43.43 MVIEKLKPVNGLNKVKKWIEDRGLNRAAVTNSSRTNAELVISMLGLTGFFEVVIIGDECEHAKPHPEPCLKALEDFVTGIKPGVIAEMPLIDITTRDPEQASAILIKDYEDPKLWAVLDKLDRKGDTVENA 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2616801 2617923 - XM_039047633.1 Bhi11g00109 48821

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00109 131 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 2 128 - -
Bhi11g00109 131 Pfam Haloacid dehalogenase-like hydrolase 5 76 IPR041492 -
Bhi11g00109 131 PANTHER PHOSPHATASE, PUTATIVE-RELATED 2 128 - -
Bhi11g00109 131 SUPERFAMILY HAD-like 3 96 IPR036412 -
Bhi11g00109 131 CDD HAD_BPGM-like 6 95 - -
Bhi11g00109 131 Gene3D - 1 119 IPR023214 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00109 - - - bhj:120090120 265.388
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00109 Bhi-Chr11:2616801 Bhi12g02551 Bhi-Chr12:79048880 3.45E-37 dispersed
Bhi11g00108 Bhi-Chr11:2608259 Bhi11g00109 Bhi-Chr11:2616801 1.49E-59 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g623 . . . . . . . . . . . . . . . . . Bhi11g00109 Tan01g2132 . . Hepe06g1060 . . . . . . . . . . Cone12ag0439 . . Lsi07g01232 . . Cme06g02501 . . . . . . . Bma12g00258 . . . . . . . . . . . . . . . . . . . . . . . . Csa03g00206 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0033385 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g00109 Bhi_Chr11 FPKM 18.6625 19.624182 31.518595 30.546762 50.662739 27.037537 45.197346 13.333687 11.053638 12.541733