Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00146 ATTCCTTCATTTTTCTTCTTCATTTTGATCTTGTTTTCTATTTCCCTTTCTGGGTTTTTTTAAAAATTATATTTTTTTAAAAGGGTTTATTAAATTTTTCTTTTTTTAGCAATTTATTTTTTGAATGTATGATGGCTGGATTGGATTTAGGGAGTCGATATCTAACTCACCTTCAAACGCCAGTAGACGATCTAGTAAATCGTAGTGGCCATTTCTCCTCCGGTGACCACCAAGACGATGACGATCCCCACCAAGCCCTAGGCGGATCGGGGGACGTCGTTGGCCGCCGCCCGCGCGGTCGGCCACCCGGTTCCAAAAACAAGCCAAAGCCGCCGGTAATCATCACCCGTGAGAGCGCCAACACGCTACGTGTCCACATCTTAGAAGTCGGCAGCGGCTGCGACGTTTTCGATTGCGTCGCTTCCTACGCCCGCCGACGACAGCGTGGGATCTGTATTTTGAGCGGTAGCGGTAACGTCACGAACGTCGGCCTTCGCCAGCCAGCAGCGGCAGGGGCGGTGCTGACACTTCAAGGGAGGTTTGAAATTTTGTCGCTTTCCGGATCGTTTCTGCCGCCGCCAGCTCCACCGGGTGCCACGAGTTTGACGATATTTTTAGCTGGAGGGCAGGGGCAGGTGGTGGGAGGGACGGTGGCCGGGGAATTAACGGCGGCTGGGCCGGTGATTTTAATTGCAGCTTCATTTACTAATGTGGCGTATGAGAGATTGCCATTGGATGAGGAGGATCAGCAGCAAGCTCCGGCAGGCGGCGGCGGAGTTGGTAACAACAACAACAATAATCCATTTCAAGACCCATCAAATTCAGGGCTTCCATTCTTGAATCTGCCACTCCATATGCAAAACGTTCAACTTCCACCCTTTTGACAAATTACAATTATTCAGACCCTCAAAATTGGATCCAATTGATGGTTTGAAATCCCAAAAAAAAAAAAAAAAAAAAAAATCATTAAGAACAGCCCATCAAATCTCTTGCAGTGATTAGATTGGAGAGTCCAAAAAAAAAAAAAAAAAGAAGAAGAAAAATTGGAGATCAGATTGACTAACTGGTTTGAAAGGTCAGCCATTGAATCTTCTTATGAACCCTTATTTTTATAAATTCTCTCTTAACTCTCTATTGTTAATTACATCTATTTTCCTTCTTCTTCTTCTTCTTTCTTTTGTGGATGTTTATTGTATACTTTAGCTTTCTCTTTTTTAATT 1220 44.34 MMAGLDLGSRYLTHLQTPVDDLVNRSGHFSSGDHQDDDDPHQALGGSGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVGSGCDVFDCVASYARRRQRGICILSGSGNVTNVGLRQPAAAGAVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFTNVAYERLPLDEEDQQQAPAGGGGVGNNNNNNPFQDPSNSGLPFLNLPLHMQNVQLPPF 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3366473 3367692 + XM_039049890.1 Bhi11g00146 48858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00146 251 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 194 IPR005175 -
Bhi11g00146 251 MobiDBLite consensus disorder prediction 213 234 - -
Bhi11g00146 251 Gene3D - 80 209 - -
Bhi11g00146 251 MobiDBLite consensus disorder prediction 207 234 - -
Bhi11g00146 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 38 250 - -
Bhi11g00146 251 ProSiteProfiles PPC domain profile profile. 77 213 IPR005175 -
Bhi11g00146 251 MobiDBLite consensus disorder prediction 23 71 - -
Bhi11g00146 251 CDD DUF296 81 192 IPR005175 -
Bhi11g00146 251 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 207 - -
Bhi11g00146 251 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 250 IPR014476 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00146 Bhi-Chr11:3366473 Bhi12g02568 Bhi-Chr12:79549718 2.09E-91 dispersed
Bhi11g00146 Bhi-Chr11:3366473 Bhi01g00104 Bhi-Chr1:2168956 1.54E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00146 - - csv:101210132 404.445