Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00156 CGTAATTGTTCATCACAAATAAATCCCAATCCTATCGCCCGACATTTCTCTCACTCCACAATCGGAGACCCAAAATTATTATTCCCTTTTTCCCATCTCTGTTTTTCTGAATTTTAATCGCATGACGGATTATCGTTTGTCGACGATGAACCTCTGGACCGACGAGAACGCGTCGGTGATGGACGCTTTCATGAACTCCGATCTGTCCTCTTACTGGGCTCCATCAGCCGCATCGTCTCACTCTCTTCACCACCCACCGCCGCCTCAATCCTCCGCCTCAACCTCCACTCCCCCGCCGGACCCGCCCAAGTCCCTTCCCGTTTTCAATCAGGAGACTCTGCAGCAGCGGCTACAGGCGCTGATCGACGGCGCTAGGGAGAGTTGGACTTACGCGATTTTCTGGCAGTCGTCGTATGATTATTCCGGTGCGTCGGTTTTGGGGTGGGGAGATGGGTATTACAAAGGGGAGGAGGATAAAGGGAAGGGAAAAGCGAAAATGGTATCGTCAGCAGCAGAGCAGGCTCACCGGAAGAAGGTTTTACGGGAGCTTAACTCTTTGATTTCTGGCTCTGCCGCCGGGCCGGACGATGCGGTGGATGAGGAGGTTACGGATACAGAATGGTTCTTTTTGGTTTCGATGACTCAGTCTTTTGTTAATGGAGTTGGGTTACCGAGTCAGGCGTTTTACAACTCGGCGCCGATTTGGGTCTCTGGTGCCGATCGGCTGTCGGCGTCTGCTTGTGAACGAGCTAGACAGGGGAGGGTTTTTGGGTTACAGACGATGGTATGTATTCCATCGCCAAACGGCGTGGTGGAAATGGGTTCAACGGAATTGATTCATCGAACGTCGGATTTGATGAACAAGGTCAAGATTCTGTTTAATTTCAACAATCTCGAAACGAGTTCTTGGATATCGGGAACCACCGCCGCCGCGTCCGCTGCCGACGAAGGGGAAAACGACCCGTCGTCGATGTGGATCAGTGAGCCGTCAAGTACAATCGAGATGAAGGATTCGATTACCACGACTGTCCCTTCCGCCAACGTTCCGGCAAAGCCAATCCATTCGGAAAATCCCAGTTCGAGCAGCTTAACAGAAAATATCAGCGCGATTCAACAACATTCCCATCCAAAACAGAGCCAAAGCTTCTTAAATTTCTCTGATTACGGGTTCGAATCAAATCCCTCAAAGACCACCACCACCGCCGCAACCACCACCACCACCACCCCATTATTCAAGCCGGAATCCGGTGGGATGCTGAATTTCGGCAACGGAAGCCTCTTCTCCGGCCACTCACAGTACGTAACAAACGAACAGAACGAGAAAAAGAGATCCCCTGCTTCTCGGAGTAGCAACGACGAAGGAATCCTCTCTTTCACCTCCGGGGTGATCTTACCCTCTTCCGGTAAGGTAAAATCCGGCGACTCAGACCACTCAGATCTCGAAGCATCGGTGATCAGAGAAGTGGATAGCTGTACAAAATCATTAGAACCCGAAAAACGTCCAAGAAAAAGAGGGAGGAAACCAGCAAACGGAAGAGAAGAGCCATTGAATCACGTAGAAGCAGAGAGACAACGGCGAGAGAAATTAAACCAGAAATTCTACGCTCTCCGAGCTGTAGTTCCAAACGTATCTAAAATGGACAAGGCCTCACTACTCGGGGACGCCGTTTCGTACATCAACGAGCTGAAGTCGAAGCTCCAAACGGCGGAATCGGAGAGAACAGAGATGGGAAAACATTTAGAATTGCTGAAGAAGGAGATGGGCGGGAAAGATTTAGGGAATTACTCGAACCCAAATGATGAAGATCTGAAAACAGGGAAAAGAAAGGTAATGGATATGGAGATCGAAGTTAAAATAATGGGTTGGGATGCGATGATAAGGATTCAAAGCAGTAAGAAGAATCATCCGGCGGCCAGGTTGATGACGGCGTTTAAGGATTTGGATTTAGAAATGCTTCATGCGAGTGTTTCCGTAGTGAATGATTTGATGATTCAACAGGCAACGGTGAAGATGGGGAGCAGATTTTACACACAAGAGCAGCTTAAAATGGCGCTCGTGGCCAGAGTCGGCGGCGGCGGCGGCGGTGGCCATGGAATGATGTAAATGGAGTTGTGTAATTAGAGGTGTGGGAGGGGACATTTTTGAGGGCTCCCAAAGTAGAGATTAGTTGAGGGAATCTGATTAGTATGTGTAAGATATAAATGTTGGTAAATTATTTTGATAATTTTTGTTGTTGTTGTTATTGTTCATCTTCGTTGTTAGAGTAATTGGGAAGTTCTATGTGTAGTTTTTTCTTTTCTAATCTTTTGTTAAATATGAAATCTAATAGAACAGAAGATCAAAGACCTTCAAACTTTGTGTTGATTTGAA 2371 47.7 MTDYRLSTMNLWTDENASVMDAFMNSDLSSYWAPSAASSHSLHHPPPPQSSASTSTPPPDPPKSLPVFNQETLQQRLQALIDGARESWTYAIFWQSSYDYSGASVLGWGDGYYKGEEDKGKGKAKMVSSAAEQAHRKKVLRELNSLISGSAAGPDDAVDEEVTDTEWFFLVSMTQSFVNGVGLPSQAFYNSAPIWVSGADRLSASACERARQGRVFGLQTMVCIPSPNGVVEMGSTELIHRTSDLMNKVKILFNFNNLETSSWISGTTAAASAADEGENDPSSMWISEPSSTIEMKDSITTTVPSANVPAKPIHSENPSSSSLTENISAIQQHSHPKQSQSFLNFSDYGFESNPSKTTTTAATTTTTTPLFKPESGGMLNFGNGSLFSGHSQYVTNEQNEKKRSPASRSSNDEGILSFTSGVILPSSGKVKSGDSDHSDLEASVIREVDSCTKSLEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAVSYINELKSKLQTAESERTEMGKHLELLKKEMGGKDLGNYSNPNDEDLKTGKRKVMDMEIEVKIMGWDAMIRIQSSKKNHPAARLMTAFKDLDLEMLHASVSVVNDLMIQQATVKMGSRFYTQEQLKMALVARVGGGGGGGHGMM 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3623455 3625825 - XM_039048241.1 Bhi11g00156 48868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00156 660 PANTHER TRANSCRIPTION FACTOR MYC2 11 649 - -
Bhi11g00156 660 Coils Coil 519 546 - -
Bhi11g00156 660 MobiDBLite consensus disorder prediction 36 67 - -
Bhi11g00156 660 MobiDBLite consensus disorder prediction 50 65 - -
Bhi11g00156 660 Gene3D - 472 549 IPR036638 GO:0046983
Bhi11g00156 660 MobiDBLite consensus disorder prediction 395 414 - -
Bhi11g00156 660 PANTHER MYC 11 649 IPR045084 GO:0003700|GO:0006355
Bhi11g00156 660 MobiDBLite consensus disorder prediction 353 384 - -
Bhi11g00156 660 MobiDBLite consensus disorder prediction 353 373 - -
Bhi11g00156 660 Pfam Helix-loop-helix DNA-binding domain 477 522 IPR011598 GO:0046983
Bhi11g00156 660 MobiDBLite consensus disorder prediction 303 322 - -
Bhi11g00156 660 SMART finulus 479 528 IPR011598 GO:0046983
Bhi11g00156 660 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 476 543 IPR036638 GO:0046983
Bhi11g00156 660 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 73 253 IPR025610 -
Bhi11g00156 660 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 473 522 IPR011598 GO:0046983
Bhi11g00156 660 CDD bHLH_AtAIB_like 470 546 - -
Bhi11g00156 660 MobiDBLite consensus disorder prediction 426 483 - -
Bhi11g00156 660 MobiDBLite consensus disorder prediction 432 483 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g00500 Bhi11g00156 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g00260 Bhi-Chr5:4932867 Bhi11g00156 Bhi-Chr11:3623455 6.80E-14 dispersed
Bhi05g00261 Bhi-Chr5:4932867 Bhi11g00156 Bhi-Chr11:3623455 6.80E-14 dispersed
Bhi05g00987 Bhi-Chr5:34822664 Bhi11g00156 Bhi-Chr11:3623455 1.83E-18 dispersed
Bhi05g00988 Bhi-Chr5:34822664 Bhi11g00156 Bhi-Chr11:3623455 1.83E-18 dispersed
Bhi11g00156 Bhi-Chr11:3623455 Bhi12g01850 Bhi-Chr12:59306808 1.52E-22 dispersed
Bhi01g00495 Bhi-Chr1:8906640 Bhi11g00156 Bhi-Chr11:3623455 5.80E-26 transposed
Bhi06g01043 Bhi-Chr6:28566348 Bhi11g00156 Bhi-Chr11:3623455 4.32E-07 transposed
Bhi08g02231 Bhi-Chr8:63586943 Bhi11g00156 Bhi-Chr11:3623455 3.79E-08 transposed
Bhi12g02164 Bhi-Chr12:68505650 Bhi11g00156 Bhi-Chr11:3623455 1.76E-13 transposed
Bhi11g00156 Bhi-Chr11:3623455 Bhi05g00500 Bhi-Chr5:11051778 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2292 PF14215 bHLH-MYC_N 3.80E-53 CL0161 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00156 K13422 - csv:101205372 1131.32