Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00174 AGCATTTTCTTCTGTGATTTCTGTTAAAAACAAAAAGAAAATTAAAAAACAAAAACAAAAAACAAAAAAGATGAAGAGAGAAACAATGGAAAATTTTGCAATAATGAGTGGGTTGGTTGGAGTGCAATTTGTATATGCAGGGAACTCTGTTTTTATGAGTTTTCTTATGTCTTTGGGGATTAATCCTTTAACTCTGGTCATCTTCTCTACCTTCTCCACTTTTCTCATTGTCTCTCCCATTGCTGTTTATTTTGAAAGGCATGATTGGCCAAAGAAACTTAGTCTAAAGTTGATCCTTCAGCTTCTTCTCATATCATTTGGAGGGGTTACATTGTTTCAATCTCTTTTTCTGAAAGGAATACAGCTAACTTCGCCAGCTTTAGCTACGGCGATGCCGAATCTCACCCCGGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCAGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACATTTCTATGTGTGATAGGCGCCTTCACCATGAGCATAATGCACAGCGCGTCGTCGGATGCAGCTGCAAAAGATAATATCCCACGACAATCACCTCCGTCCGAACAAGTGTTCAATGAACAGAAGATCCTTGGTTGTGTGTATCTCTTCTCGGCGATCATCGTTTTATCTAGCATAGTTGTTCTGCAGGCATCGACACTAGGCGATTTCCCGGCCCCGATGTCGTTGTGTGCGATAACGTCTCTCATTGGAGTTCTCATAACCATAGTTGTACAGATAGTTCAATATCAGAAACTGGACATTGGTTGGCCACTTCTGATCAGTGGTAAAGAATTGGCTGCCTATTTTGTTCTAGGCGGAACCATTAGCGGTGCTTGCGTGAGCTTCAACGGGTGGGCGATGAAGAAACGAGGGCCAGTTTTGGTGTCGATGTTTAGTCCAATCGGAACCGTTTGCTCACTCATTCTCTCAGTTTTCACCTTGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACCGGTCTCTACTTCGTCCTGTGGGCGAAAGGGAAGGAACGTTACGTCAATCGAAACTGTCCCGAGAGTGAGTTCGACGTTGACAAGCCTCTTTTAAGTTGA 1126 42.54 MKRETMENFAIMSGLVGVQFVYAGNSVFMSFLMSLGINPLTLVIFSTFSTFLIVSPIAVYFERHDWPKKLSLKLILQLLLISFGGVTLFQSLFLKGIQLTSPALATAMPNLTPGLIFAIAWIFRLEKVQLSCIYSKIKILGTFLCVIGAFTMSIMHSASSDAAAKDNIPRQSPPSEQVFNEQKILGCVYLFSAIIVLSSIVVLQASTLGDFPAPMSLCAITSLIGVLITIVVQIVQYQKLDIGWPLLISGKELAAYFVLGGTISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTLGESINIGSLAGMFLMFTGLYFVLWAKGKERYVNRNCPESEFDVDKPLLS 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3845174 3847336 + XM_039050317.1 Bhi11g00174 48886

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00174 351 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020|GO:0016021
Bhi11g00174 351 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Bhi11g00174 351 PANTHER OS11G0588100 PROTEIN 10 351 - -
Bhi11g00174 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 153 - -
Bhi11g00174 351 PANTHER WAT1-RELATED PROTEIN 10 351 IPR030184 GO:0016021|GO:0022857
Bhi11g00174 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 330 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00174 - - - cmo:103490881 602.438
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00174 Bhi-Chr11:3845174 Bhi12g00464 Bhi-Chr12:14976870 1.36E-146 dispersed
Bhi11g00174 Bhi-Chr11:3845174 Bhi04g00214 Bhi-Chr4:5166905 6.75E-45 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi01g03020 . 1 756 Nodulin-like Gene Family AT4G19180 60.7 5.3e-251 864.8
Bhi09g02721 . 24 284 Nodulin-like Gene Family AT3G45870 71.3 4.2e-100 362.1
Bhi09g02722 . 1 202 Nodulin-like Gene Family AT3G45870 69.8 1.5e-73 273.9
Bhi06g00488 . 9 371 Nodulin-like Gene Family AT3G28050 59.2 9.4e-116 414.5
Bhi11g00174 . 1 331 Nodulin-like Gene Family AT5G47470 63.1 9.8e-108 387.9
Bhi12g00464 . 6 336 Nodulin-like Gene Family AT5G47470 59.6 1.4e-101 367.5
Bhi06g00488 . 7 349 Nodulin-like Gene Family AT5G40230 52.4 6.0e-94 342.0
Bhi06g00488 . 9 330 Nodulin-like Gene Family AT5G40240 54.3 2.9e-93 339.7
Bhi11g03089 CCT,ECH 6 363 Nodulin-like Gene Family AT5G40240 51.0 2.3e-90 330.1
Bhi09g02199 . 17 273 Nodulin-like Gene Family AT3G53210 61.1 8.0e-85 311.2
Bhi04g00214 . 16 282 Nodulin-like Gene Family AT3G53210 56.9 6.8e-84 308.1
Bhi03g01607 . 99 363 Nodulin-like Gene Family AT2G37450 59.6 1.2e-83 307.4
Bhi07g00926 . 98 331 Nodulin-like Gene Family AT2G37450 57.3 9.6e-70 261.2
Bhi07g00925 . 98 334 Nodulin-like Gene Family AT2G37450 54.4 4.2e-65 245.7
Bhi04g01968 CCT 115 348 Nodulin-like Gene Family AT2G37450 51.5 5.1e-63 238.8
Bhi03g01607 . 12 349 Nodulin-like Gene Family AT2G37460 67.5 8.8e-125 444.5
Bhi07g00926 . 11 331 Nodulin-like Gene Family AT2G37460 58.9 2.6e-100 363.2
Bhi07g00925 . 11 334 Nodulin-like Gene Family AT2G37460 55.9 1.0e-96 351.3
Bhi09g02666 CCT 14 345 Nodulin-like Gene Family AT2G37460 52.9 1.5e-95 347.4
Bhi06g00772 . 9 332 Nodulin-like Gene Family AT2G37460 55.2 1.0e-93 341.3
Bhi06g00777 . 9 332 Nodulin-like Gene Family AT2G37460 55.2 1.0e-93 341.3
Bhi04g01972 . 26 349 Nodulin-like Gene Family AT2G37460 51.4 2.6e-92 336.7
Bhi06g00731 . 8 343 Nodulin-like Gene Family AT2G37460 51.0 7.5e-92 335.1
Bhi03g02519 CCT 13 341 Nodulin-like Gene Family AT2G37460 51.8 1.8e-90 330.5
Bhi11g02818 . 12 342 Nodulin-like Gene Family AT2G37460 52.4 2.3e-88 323.6
Bhi11g02816 CCT 12 339 Nodulin-like Gene Family AT2G37460 50.5 1.2e-84 311.2
Bhi04g00214 . 1 395 Nodulin-like Gene Family AT1G75500 73.2 1.2e-161 567.0
Bhi09g02199 . 1 387 Nodulin-like Gene Family AT1G75500 71.8 2.8e-150 529.3
Bhi02g00110 . 7 340 Nodulin-like Gene Family AT1G75500 61.2 4.5e-116 415.6
Bhi07g01699 . 11 364 Nodulin-like Gene Family AT1G60050 52.2 2.0e-97 353.6
Bhi07g00926 . 12 340 Nodulin-like Gene Family AT2G39510 62.7 2.1e-115 413.3
Bhi07g00925 . 12 361 Nodulin-like Gene Family AT2G39510 59.1 1.8e-114 410.2
Bhi03g01607 . 13 341 Nodulin-like Gene Family AT2G39510 61.1 5.8e-113 405.2
Bhi06g00731 . 8 331 Nodulin-like Gene Family AT2G39510 57.8 2.1e-110 396.7
Bhi06g00772 . 12 349 Nodulin-like Gene Family AT2G39510 58.5 1.4e-106 384.0
Bhi06g00777 . 12 349 Nodulin-like Gene Family AT2G39510 58.5 1.4e-106 384.0
Bhi09g02666 CCT 14 370 Nodulin-like Gene Family AT2G39510 53.6 5.1e-101 365.5
Bhi03g02519 CCT 16 339 Nodulin-like Gene Family AT2G39510 51.7 1.9e-92 337.0
Bhi11g02818 . 16 354 Nodulin-like Gene Family AT2G39510 50.9 9.6e-92 334.7
Bhi06g00488 . 9 330 Nodulin-like Gene Family AT4G15540 50.9 1.1e-86 317.8
Bhi04g01968 CCT 18 275 Nodulin-like Gene Family AT4G08290 64.5 1.2e-89 327.4
Bhi04g01972 . 19 275 Nodulin-like Gene Family AT4G08290 62.8 9.2e-87 317.8
Bhi04g01971 . 1 257 Nodulin-like Gene Family AT4G08290 57.9 9.2e-79 291.2
Bhi09g02666 CCT 14 265 Nodulin-like Gene Family AT4G08290 53.4 1.7e-72 270.4
Bhi09g02666 CCT 12 356 Nodulin-like Gene Family AT4G08300 68.3 2.4e-127 453.0
Bhi04g01968 CCT 25 375 Nodulin-like Gene Family AT4G08300 50.8 4.6e-94 342.4
Bhi04g01972 . 26 348 Nodulin-like Gene Family AT4G08300 52.8 1.3e-93 340.9
Bhi10g02345 CCT 11 263 Nodulin-like Gene Family AT5G64700 61.3 1.2e-77 287.3
Bhi10g02344 . 4 256 Nodulin-like Gene Family AT5G64700 56.5 1.6e-69 260.4
Bhi03g01394 . 1 255 Nodulin-like Gene Family AT5G64700 51.6 1.6e-61 233.8
Bhi06g01319 . 1 362 Nodulin-like Gene Family AT4G30420 53.2 1.2e-102 370.9
Bhi06g01318 . 1 307 Nodulin-like Gene Family AT4G30420 54.5 1.3e-88 324.3
Bhi07g01169 . 6 380 Nodulin-like Gene Family AT5G07050 65.9 2.4e-141 499.6
Bhi11g02818 . 10 342 Nodulin-like Gene Family AT5G07050 68.9 6.2e-129 458.4
Bhi03g02519 CCT 10 364 Nodulin-like Gene Family AT5G07050 62.0 3.0e-123 439.5
Bhi11g02816 CCT 10 339 Nodulin-like Gene Family AT5G07050 62.0 5.6e-114 408.7
Bhi09g02666 CCT 14 338 Nodulin-like Gene Family AT5G07050 53.0 4.5e-95 345.9
Bhi11g02815 . 10 300 Nodulin-like Gene Family AT5G07050 54.2 6.1e-92 335.5
Bhi11g02817 . 10 126 Nodulin-like Gene Family AT5G07050 70.1 3.7e-41 166.8
Bhi03g02519 CCT 13 355 Nodulin-like Gene Family AT3G56620 58.0 3.1e-106 382.9
Bhi11g02818 . 12 348 Nodulin-like Gene Family AT3G56620 54.3 9.7e-100 361.3
Bhi07g01169 . 14 341 Nodulin-like Gene Family AT3G56620 55.9 7.7e-97 351.7
Bhi11g02816 CCT 12 346 Nodulin-like Gene Family AT3G56620 51.8 2.9e-96 349.7
Bhi11g02817 . 12 128 Nodulin-like Gene Family AT3G56620 63.2 1.5e-39 161.4
Bhi07g01699 . 1 370 Nodulin-like Gene Family AT1G70260 55.1 6.9e-106 381.7
Bhi08g00723 . 3 363 Nodulin-like Gene Family AT1G09380 59.5 1.7e-112 403.7
Bhi06g01530 . 1 320 Nodulin-like Gene Family AT1G09380 59.1 5.1e-109 392.1
Bhi03g02519 CCT 13 349 Nodulin-like Gene Family AT2G40900 61.4 4.1e-109 392.5
Bhi11g02818 . 12 347 Nodulin-like Gene Family AT2G40900 56.3 3.2e-106 382.9
Bhi11g02816 CCT 12 346 Nodulin-like Gene Family AT2G40900 54.6 7.0e-101 365.2
Bhi07g01169 . 14 349 Nodulin-like Gene Family AT2G40900 54.5 1.7e-99 360.5
Bhi11g02817 . 12 126 Nodulin-like Gene Family AT2G40900 61.7 2.7e-36 150.6
Bhi02g00110 . 1 339 Nodulin-like Gene Family AT3G18200 68.4 8.0e-126 448.0
Bhi04g00214 . 16 360 Nodulin-like Gene Family AT3G18200 56.8 3.7e-107 386.0
Bhi09g02199 . 17 353 Nodulin-like Gene Family AT3G18200 54.6 9.8e-100 361.3
Bhi09g02666 CCT 12 356 Nodulin-like Gene Family AT1G44800 65.2 6.5e-125 444.9
Bhi04g01968 CCT 25 368 Nodulin-like Gene Family AT1G44800 50.6 1.0e-93 341.3
Bhi04g01972 . 26 348 Nodulin-like Gene Family AT1G44800 51.1 1.1e-92 337.8
Bhi09g02721 . 108 378 Nodulin-like Gene Family AT5G45370 69.1 3.4e-102 369.0
Bhi09g02722 . 26 296 Nodulin-like Gene Family AT5G45370 69.1 3.4e-102 369.0
Bhi09g02666 CCT 12 315 Nodulin-like Gene Family AT1G21890 65.1 5.4e-113 405.2
Bhi04g01972 . 25 326 Nodulin-like Gene Family AT1G21890 51.1 2.1e-88 323.6
Bhi04g01968 CCT 24 325 Nodulin-like Gene Family AT1G21890 50.2 6.6e-87 318.5
Bhi11g02818 . 15 318 Nodulin-like Gene Family AT1G21890 53.2 4.3e-86 315.8
Bhi11g02816 CCT 16 315 Nodulin-like Gene Family AT1G21890 50.5 6.4e-82 302.0
Bhi03g01607 . 11 313 Nodulin-like Gene Family AT1G21890 50.3 2.1e-80 297.0
Bhi01g03595 . 1 565 Nodulin-like Gene Family AT1G80530 59.4 2.4e-187 652.9
Bhi01g03597 . 3 459 Nodulin-like Gene Family AT1G80530 58.3 1.5e-144 510.8
Bhi01g03596 . 3 459 Nodulin-like Gene Family AT1G80530 58.3 1.5e-144 510.8
Bhi01g02990 . 1 417 Nodulin-like Gene Family AT4G19450 68.0 2.3e-150 529.6
Bhi12g02575 . 44 442 Nodulin-like Gene Family AT4G19450 58.2 1.4e-128 457.2
Bhi02g00364 . 7 535 Nodulin-like Gene Family AT1G74780 58.9 2.8e-177 619.4
Bhi02g00365 . 10 527 Nodulin-like Gene Family AT1G74780 57.7 1.9e-170 596.7
Bhi10g01865 CCT 9 542 Nodulin-like Gene Family AT4G34950 69.2 1.5e-216 750.0
Bhi05g01728 CCT 10 516 Nodulin-like Gene Family AT4G34950 65.4 5.9e-202 701.4
Bhi05g01729 . 10 444 Nodulin-like Gene Family AT4G34950 56.6 1.3e-164 577.4
Bhi04g02444 . 6 592 Nodulin-like Gene Family AT5G14120 68.6 4.3e-232 801.6
Bhi04g02443 . 1 480 Nodulin-like Gene Family AT5G14120 66.6 5.2e-177 618.6
Bhi10g01865 CCT 1 388 Nodulin-like Gene Family AT2G16660 68.4 4.1e-146 515.4
Bhi05g01728 CCT 4 368 Nodulin-like Gene Family AT2G16660 67.3 5.2e-141 498.4
Bhi05g01729 . 4 296 Nodulin-like Gene Family AT2G16660 54.4 7.4e-103 371.7
Bhi07g00771 . 13 581 Nodulin-like Gene Family AT2G39210 69.2 4.8e-226 781.6
Bhi04g01312 . 26 584 Nodulin-like Gene Family AT2G39210 64.2 7.4e-211 731.1
Bhi07g00770 . 3 577 Nodulin-like Gene Family AT2G39210 63.5 3.0e-204 709.1
Bhi11g02056 . 1 575 Nodulin-like Gene Family AT2G39210 60.5 5.5e-198 688.3
Bhi08g00235 CCT,ECH 19 572 Nodulin-like Gene Family AT2G39210 58.7 1.6e-184 643.7
Bhi03g01519 . 18 570 Nodulin-like Gene Family AT2G39210 57.4 1.9e-182 636.7
Bhi08g00252 . 16 575 Nodulin-like Gene Family AT2G39210 50.6 1.0e-151 534.6
Bhi01g02990 . 6 565 Nodulin-like Gene Family AT3G01630 52.9 1.0e-148 524.6
Bhi12g02575 . 50 589 Nodulin-like Gene Family AT3G01630 50.4 1.9e-139 493.8
Bhi04g02444 . 6 429 Nodulin-like Gene Family AT3G01930 69.9 2.1e-167 586.3
Bhi04g02443 . 1 317 Nodulin-like Gene Family AT3G01930 67.3 1.2e-112 404.4
Bhi02g00364 . 10 534 Nodulin-like Gene Family AT1G18940 54.8 1.7e-163 573.5
Bhi02g00365 . 7 520 Nodulin-like Gene Family AT1G18940 53.3 1.2e-156 550.8
Bhi02g00364 . 6 536 Nodulin-like Gene Family AT2G34350 56.1 1.2e-159 560.8
Bhi02g00365 . 11 525 Nodulin-like Gene Family AT2G34350 54.1 2.3e-152 536.6
Bhi08g00235 CCT,ECH 15 576 Nodulin-like Gene Family AT2G28120 68.7 8.4e-220 760.8
Bhi07g00771 . 8 566 Nodulin-like Gene Family AT2G28120 61.8 1.1e-195 680.6
Bhi11g02056 . 12 559 Nodulin-like Gene Family AT2G28120 60.1 3.0e-185 646.0
Bhi04g01312 . 24 589 Nodulin-like Gene Family AT2G28120 58.8 5.1e-185 645.2
Bhi07g00770 . 1 563 Nodulin-like Gene Family AT2G28120 56.2 1.1e-176 617.5
Bhi08g00252 . 13 569 Nodulin-like Gene Family AT2G28120 56.5 9.1e-174 607.8
Bhi03g01519 . 16 564 Nodulin-like Gene Family AT2G28120 56.6 3.2e-171 599.4
Bhi08g00244 . 8 580 Nodulin-like Gene Family AT2G28120 53.1 3.1e-166 582.8
Bhi08g00245 . 132 678 Nodulin-like Gene Family AT2G28120 51.3 1.2e-160 564.3
Bhi08g00251 . 14 557 Nodulin-like Gene Family AT2G28120 51.8 4.4e-160 562.4
Bhi08g00242 . 1 564 Nodulin-like Gene Family AT2G28120 51.2 4.4e-152 535.8
Bhi01g02990 . 1 570 Nodulin-like Gene Family AT1G31470 57.0 4.4e-168 589.0
Bhi12g02575 . 50 596 Nodulin-like Gene Family AT1G31470 55.7 2.3e-161 566.6
Bhi09g01473 . 34 223 Nodulin-like Gene Family AT1G76800 75.8 4.2e-70 261.9
Bhi04g01784 . 17 217 Nodulin-like Gene Family AT1G76800 70.1 6.6e-68 254.6
Bhi05g00713 . 10 202 Nodulin-like Gene Family AT1G76800 63.2 1.3e-60 230.3
Bhi05g00713 . 9 202 Nodulin-like Gene Family AT3G25190 68.9 2.0e-65 246.5
Bhi04g01784 . 23 217 Nodulin-like Gene Family AT3G25190 63.1 1.1e-58 224.2
Bhi09g01473 . 41 223 Nodulin-like Gene Family AT3G25190 64.2 1.8e-58 223.4
Bhi04g01784 . 4 217 Nodulin-like Gene Family AT1G21140 70.1 4.5e-72 268.5
Bhi09g01473 . 24 223 Nodulin-like Gene Family AT1G21140 72.5 7.7e-72 267.7
Bhi05g00713 . 7 202 Nodulin-like Gene Family AT1G21140 63.8 3.1e-65 245.7
Bhi04g01784 . 11 214 Nodulin-like Gene Family AT3G43630 72.7 7.7e-72 267.7
Bhi09g01473 . 27 220 Nodulin-like Gene Family AT3G43630 72.6 1.1e-70 263.8
Bhi05g00713 . 7 199 Nodulin-like Gene Family AT3G43630 64.4 5.6e-62 235.0
Bhi04g01784 . 2 217 Nodulin-like Gene Family AT3G43660 69.9 1.7e-71 266.5
Bhi09g01473 . 32 223 Nodulin-like Gene Family AT3G43660 72.9 1.7e-71 266.5
Bhi05g00713 . 7 202 Nodulin-like Gene Family AT3G43660 62.8 1.0e-63 240.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002593 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 3 2 2 2 2 2 2 2 1 1 3 2 0 57
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g00174 Bhi_Chr11 FPKM 1.36618 1.086921 0.56081 0.3258 2.950963 1.835519 3.254948 1.704091 1.687291 1.43767