Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00227 TCTAGGTGTTTTACGTATAAGTGGTTTACTTGCCCTGTCTTCTTCCCTTTCTCAATTCCATCATATTTCTGTTCACCATTTTCGCAGCTCCAAATGATAAGATGGCAAAGCAGTCGAGTTCTCTTTTCCTCGAGGAATGGTTGAAGAGCATCGGCGGCACTGCTCTTAACTCCAAACTCACTTCCTCTTCTGCTCGAGAAATTATCCAAGCATGGGCTGAGCTTAGAAGCTCTTTGGAACATCAATCCTTTGATGATCGCCACATTCAATCGCTCAAAATTCTCGTTAACTCTCAGTCCTCACTCTATGTTGCAGACCCTCAAGCTAAGTTGGTGATTTCTATACTTTCTTCTCCCAATTTCTCTATTCCTGATGAATCCTATCCCCTTTTTCTGAGGATCCTTTATATCTGGGTCAGAAAATCTCTCCGACCCTCTTTAGTTCTTGTCGATTCATCTGTTGAGGTTCTCTCTCATATTTTTTCTTCCAAAATTGAATTGCGGAAGAACCCTTTGTTTTTCTCTGAAGGGGTTTTAGTTTTGGGTGCAATTTCGTATCTGCTTTCAGCTTCAGAAAAATCAAAATTATGCTGTTTGGAGTTGCTTTGCAGGGTTTTGGAAGAAGAATACCTACTGGTTGGATCAGTGGGAGAGATAATTCCAGAATTTCTTGCTGGGATTGGTTATGCTTTATCTTCATCAGTGAATGCTCATGTTGTTAGATTGTTAGATTCTTTGTTAGGAATTTGGGGTAATATAGGTGGCCCTATTGATACTCTTTCTAGTGGGTTAATGATTCTGCATATGATTGAATGGGTGACCTCTGGTATGATTAGTCTTCATTCTTTTGAGAAATTAGATGTGTTTAGCCAAGCTATTTTAGTGTCTTCAAAGGAAAGTTATGCTTCATTTGCTGTTGTAATGGCTGCAGCTGGAATATTGAGGGCTTTTAATACTCAAAAAGGCTTGTTGAGTAGTTCAGAAAGAGAAACAATATCTAGAATAAGGATTTCAGCCCAAGATTGTTTAGAATCTATAGCAAGGAATTTTATTTCTACTATGGAAGGATCTTCAATTACAGGCAATGACCATAGAAGGAGCGTGCTTCTATTGTGTATTTCGTTGGCAATAGCACGTTGTGGTCCTGTGTCATCTTGCCCGCCTGTGCTCATTTGTGTTGTTTATGCTTTGTTGACTGAAATATTTCCTTTGCAGCGTTTATATGCCAAAATTAATGAATTCTCTTTTGCCGAGTTGGGTGCGTTGGGGCTTACTCTAGTGAACGAGCATCTGGGTAGTATTCCTTTTAAGGAAGCCGGGGCCATCACTGGTGTTTTTTGCAGTCAGTATGCTACACTTGAGGAAGAGGACAAAAGTTTTGTTGAGAATCTTGTATGGGATTACTGTCAAGACGTCTACTCAAGGCATAGACTAGCCGGTTTGGTGCTTCGTGGCAGAGAGGATGAATTATTAGAGAATATAGAGAAAATTGCAGAGTCTGCTTTCCTCATGGTTGTAGTTTTCGCATTAGCCGTCACAAAAGAAAAGTTAGATTCCAAATATACGCTGGAAAGTCAGTTTGACATATCAGTAAGAATACTTGTTTCATTCTCTTGTATGGAATACTTTCGGCGTATTCGCTTGCCAGAATATATGGATACTATCCGAGGGGTTGTTGCAAGCATTCAGGGGAATGAGTCTGCTTGTGTATCTTTCATTGAATCAATGCCTACGTACCAAGATCAAACAAATGGGCCTGATAACTCTATTGGGCGGATAACAAAATATTCATGGACCAAGGACGAAGTGCAAACTGCACGTATGTTGTTTTATGTACGAGTCATTCCAACTTGCATTGAGCGTGTTCCTACCCAAGTGTATGGGAAGGTGGTAGCCCCAACAATGTTTTTTCAATAAGATATATGGGGCATCCAAATGCAAAAGTAGCCCGAGCTTCGCACTCCGTGTTTATAGCTTTCATGTCTGGGAAGGATGACCTTGGCGATGAAAAGAGAGTGACGTTGAAGGAGGAGCTTGTTTTCTACTACA 2048 40.48 MAKQSSSLFLEEWLKSIGGTALNSKLTSSSAREIIQAWAELRSSLEHQSFDDRHIQSLKILVNSQSSLYVADPQAKLVISILSSPNFSIPDESYPLFLRILYIWVRKSLRPSLVLVDSSVEVLSHIFSSKIELRKNPLFFSEGVLVLGAISYLLSASEKSKLCCLELLCRVLEEEYLLVGSVGEIIPEFLAGIGYALSSSVNAHVVRLLDSLLGIWGNIGGPIDTLSSGLMILHMIEWVTSGMISLHSFEKLDVFSQAILVSSKESYASFAVVMAAAGILRAFNTQKGLLSSSERETISRIRISAQDCLESIARNFISTMEGSSITGNDHRRSVLLLCISLAIARCGPVSSCPPVLICVVYALLTEIFPLQRLYAKINEFSFAELGALGLTLVNEHLGSIPFKEAGAITGVFCSQYATLEEEDKSFVENLVWDYCQDVYSRHRLAGLVLRGREDELLENIEKIAESAFLMVVVFALAVTKEKLDSKYTLESQFDISVRILVSFSCMEYFRRIRLPEYMDTIRGVVASIQGNESACVSFIESMPTYQDQTNGPDNSIGRITKYSWTKDEVQTARMLFYVRVIPTCIERVPTQVYGKVVAPTMFFQ 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5397142 5399421 - XM_039047996.1 Bhi11g00227 48939

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00227 604 PANTHER OBSCURIN-LIKE PROTEIN 1 602 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00227 - - - csv:101212894 995.727
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00225 Bhi-Chr11:5382302 Bhi11g00227 Bhi-Chr11:5397142 0 dispersed
Bhi11g00226 Bhi-Chr11:5396122 Bhi11g00227 Bhi-Chr11:5397142 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g445 Blo02g01076 . . . Bpe05g00614 . . . . . . . . . . . . Bhi11g00227 Tan01g1959 . . Hepe06g1190 . . Cla10g00317 Cam10g0332 Cec10g0346 Cco10g0338 Clacu10g0329 Cmu10g1169 Cre10g0579 . . . . Lsi07g01366 . . Cme06g02651 . . . . . . Bma05g00794 . . . . . . . . . . . . . . . . . . . . . . . . . Csa03g00340 Chy06g01985 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005625 0 3 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 9 3 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g00227 Bhi_Chr11 FPKM 0.323432 0.0 0.0 0.308009 1.527294 1.163481 1.149239 0.234026 0.209943 0.292638