Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00266 GACGAGTACCCTCAGGAAAATTTTGAAGCAGAGAGATTATGATGGAGTGGGAAAAGCCTGAGCAGCAAAATCCTTACCATCATCAGAACCCTCCTCTTCGAGACGATCATCTCCATCACCTCACCGGAACTACCGCCGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGTGAGCAGCTAGTTGAGATGCATAAGACCCTCACTGCTCACCAGGATCTCACAGGAATGAGGTTGGGTAATATGTATTGTGAGCCATTGATGACATCTTCCAGCCACAAAATCACTTCTAGACAACGATGGACTCCGACGCCTGTGCAACTTCAGATCTTAGAGCGTATATTTGAGCAAGGGAATGGAACTCCCAGCAAACAAAAGATCAAAGAGATAACCTCTGAACTGGGTCAGCATGGCCAAATTTCTGAATCTAATGTCTATAACTGGTTCCAAAACAGGCGTGCTCGATCGAAGAGGAAGCAGCAAAGTACAGCACCCGCCTATGGTGAATCGGAAGTGGAGACAGAAGTCGAGTCACCAAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCATCAATCCTCTGCATCTTTGGGGGACGACATGTGCTTCCAGAGTCCGGACATGAGTTCTGAACTGCATTTCCGGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCTTCGAATGGAAGTTTAAAAACTGCGAGAAGTTTCAACCAGATGTCTTTTTATGAGGCAGGGAATGAGCAGTTGACAGGAAAGATTGAAACACCAGAGAACTATAGTATTTACCAGCAAGCAGAAGGCTACAGCATGACCGAACGACCATGAATTCTTATACAATTAACACAAGGTGTAGTTGTCTTATTACGAATATGCTGGACTTCTAGCTCTCATGTGACTGTGATTTAGTCTGATATTGAAGGAGACGGTGATGACGATGACGAATGATGCTGACTTGTGTGCTCGTATCTTGTCGTGGATTGTCGGAGTATTCAGTTTTGAGTAATGTATTTTGGTTGAATTGTGTTTGGAGATGAGCATTGGGAGTTTGATTGGTTGATTGAGCAATTCAAAGAGTCTTTTTGAGTTTGTTGAATGACCCCTTAAGAGGAGAGGATGTATGGTGTCCATTTGTACAAGAATGTGTTTGTATTAAAAAGGATGATTGCTAAAATGATGATCCTAATTGATAGGAGAATGGGCACAGCCTCTGACAACCTCATTCTCTTTCGTACTA 1287 43.43 MMEWEKPEQQNPYHHQNPPLRDDHLHHLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDLTGMRLGNMYCEPLMTSSSHKITSRQRWTPTPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQSTAPAYGESEVETEVESPKDKKTKPVDFQTHQSSASLGDDMCFQSPDMSSELHFRDPNTNKADTLFPSNGSLKTARSFNQMSFYEAGNEQLTGKIETPENYSIYQQAEGYSMTERP 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6084763 6089169 + XM_039048786.1 Bhi11g00266 48978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00266 279 MobiDBLite consensus disorder prediction 158 191 - -
Bhi11g00266 279 CDD homeodomain 100 162 IPR001356 GO:0003677
Bhi11g00266 279 MobiDBLite consensus disorder prediction 1 26 - -
Bhi11g00266 279 Pfam Homeodomain 100 160 IPR001356 GO:0003677
Bhi11g00266 279 SUPERFAMILY Homeodomain-like 96 164 IPR009057 -
Bhi11g00266 279 ProSiteProfiles 'Homeobox' domain profile. 96 161 IPR001356 GO:0003677
Bhi11g00266 279 PANTHER - 2 276 - -
Bhi11g00266 279 Gene3D - 102 166 - -
Bhi11g00266 279 SMART HOX_1 98 165 IPR001356 GO:0003677
Bhi11g00266 279 PANTHER WUSCHEL-RELATED HOMEOBOX 13 2 276 IPR044559 GO:0003700
Bhi11g00266 279 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00264 Bhi-Chr11:6084567 Bhi11g00266 Bhi-Chr11:6084763 0 dispersed
Bhi11g00266 Bhi-Chr11:6084763 Bhi02g00135 Bhi-Chr2:2560364 7.80E-15 dispersed
Bhi11g00265 Bhi-Chr11:6084569 Bhi11g00266 Bhi-Chr11:6084763 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2298 PF00046 Homeodomain 8.90E-19 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00266 - - csv:101203410 541.576