Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00296 GGTGACGGTCGACCCACTTGATCGGCGGTAGATTTGTGGAGAACAAGACGAAAAGGCATTGGTATGGCGATCTCAAATTGTATTTGTTTTTAAAGCAATTTCAAGATCAATCTGGAAATCCCTCTGCAAATTGCTTCAATTTGTTGTGGACCAATTAATTACCCTGAACTACACGCTGCATCGAAAAAATTTGTCATAGGAAATGATACGAACCCAACCAACCCTTTTTCTTCTTCTTTTACCTTTTCTTTCTCCATCCTTTTCAATCCAATCCCCCTTTGATTTATTATCTCTAAACCCCCTTTAATTTGTAGCGACAAGAAAACTCTTCCAAACACAGCTTTAAATGCGAGTTGGTTGATGCGCTTCTTTTCCTCCTCTTCCTTCTTCTTAAGCGCTAAGTTTTTCCCCCTTTCTTTGAAACCCCCAATCCTTCAAAACCCATTTTGGATTCTCGATTTTGGACCAACCCTTTTTCATTTCCATGGATTTCATAGCGAACCCATTTCGTTTTTCTTCATCTTCCTCGCCTTCGTTTGGGAATCTCTTTGAGAGAGTTAGAGAAATTTGTTGCTATGCGGTTTCTGCGATTCTTGGCAATATCCTGTCTGCGATCTTCACTTTCTTCTTCGCTCTAGTGGGGACTTTGCTTGGAGCCATGACTGGAGCATTGATTGGCCAAGAAACTGAGAGTGGGTTTGTTAGAGGAGCTGCTGTTGGGGCAATTTCTGGAGCTGTTTTCTCTATTGAAGTCTTTGAATCTTCTTTGGTTCTTTGGCAATCAGATGAATCAGGGATAGGCTGTCTTCTTTATCTGATTGATGTCATTGCAAGCCTCCTCAGTGGACGTCTAGTTCGAGAACGCATCGGTCCAGCCATATTGAGTGCAGTTCAAAGTCAGATGGGTGCTACAGAGACAAGCTTTGATGACATCCCGAACATCTTCGACACCAGTAGTGCGAAAGGATTGCCTGGGGACTCGGTTGAGAAAATTCCCAAAATCGTTGTATCTAAGAACAATAGCGTAGATGCTTATGGCGAGAAAGTCTGTTGTTCTGTTTGCCTTCAGGACTTTCAGCTTGGAGAGACTGTAAGAAGCTTACCATATTGCCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTCTTACTCATGGCTCTTGCCCTTTATGCAGAAGGGATCTGTAATATTTTTCCACTCACCACTGTCTTAACTTTGCCCTTGTAAATTAAGAAAAAAAAAAAAACAGAGAAAATTTCCTTATTTTTTGCTTAAACTTGAGTCAGATCATTGCTTCAGTAGTTCGAACAGGGGCATTCAGAACATACTGTGACGATGGATCATCACCGATGTATAAAAATTTTGAGTTATTATAGGCTTTATATTGCTCTTGTGAATAAAATTATATTCCTCCTTTTCTTACTCA 1431 40.67 MDFIANPFRFSSSSSPSFGNLFERVREICCYAVSAILGNILSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKIVVSKNNSVDAYGEKVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6815771 6817785 + XM_039047480.1 Bhi11g00296 49008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00296 235 Pfam Ring finger domain 190 232 IPR001841 -
Bhi11g00296 235 SMART ring_2 190 231 IPR001841 -
Bhi11g00296 235 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 9 235 IPR044523 -
Bhi11g00296 235 SUPERFAMILY RING/U-box 177 235 - -
Bhi11g00296 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 235 IPR013083 -
Bhi11g00296 235 CDD RING-H2_PA-TM-RING 189 232 - -
Bhi11g00296 235 Pfam YMGG-like Gly-zipper 49 85 IPR027367 -
Bhi11g00296 235 ProSiteProfiles Zinc finger RING-type profile. 190 232 IPR001841 -
Bhi11g00296 235 PANTHER NEP1-INTERACTING PROTEIN-LIKE 1 9 235 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01646 Bhi-Chr9:44221172 Bhi11g00296 Bhi-Chr11:6815771 1.97E-19 dispersed
Bhi11g00296 Bhi-Chr11:6815771 Bhi01g00172 Bhi-Chr1:3442310 6.18E-16 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00296 - - csv:101220376 459.529