Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi11g00331 | TTATAAAAAAATTAATTAAAATAATTTTTGTGTTCTTACCATTTCTTTATATTGCACAAAAGAATCTTGAATTGGATTTTAAACTATGAGATAAGTATGAGTAACACAAAACCAAAATATGGAGTGGCCCACCTCCCTCCTAAGTTGTCTTCTTCTCCTCTTCCCTTCTAACAACCAAAAGTCTCTTTAAGATTTTCCTTTTTTCCAAAGAAAGCACCACAAACCCTCAATACCGATCCCTTCTCTTCTCAACGTTGTGTGTGTGTGTGTGTCATGACTCGCTATATCAGAGCTCTCGCCGGGAATACTTCGTTGGCACCTCCGCCGGAGGCGGTGGCCATGGAGTCGGACTTCGTGGTCATTCTGGCGGCGTTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGGCGTGGGGGAGGCAGTGCAGGAAATCAGGCGTCGGCGAATAGGGGACTGAAGAAGAAGATCCTGCAGTCGCTCCCAAAATTCAAGTACAAGTCGACGGGGGGAGAGGGGAAAATAGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAGGGGGAGGAGATCCGGCAGCTGCCGCAGTGCGGGCATTGCTTCCACGTTAGCTGCGTAGACACGTGGCTGGGGTCCCACTCCTCATGCCCTTCCTGCCGCCAGATTTTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCGGTGGTGCAAGGCGGCGCTGCTCACAACAACGAGGAGGTGGAAGATAACAACAGGGGTTTGGGATTTCTGCCTTGACTCAACGCCATTTCATAAAATTCAAACTAAGCTTAGCTTCAACCTCTATTTATTTCTGGTTTCATCACACACACAAGATTGAGTTTTGTGTGAATTCTTTTTTCTTTTTTTTTTCTTAATACAAAAACAAATCTTCACCCATAATGTAAACAATCCCCTAATTAAAAAAAACTGCACTTGTAAATTCTAGCTTCTTTGACTCTTTTTTGTGATGAATTTGACTCAAAGTTTTTTGTTTTTTGTT | 1054 | 45.92 | MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEVEDNNRGLGFLP | 178 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 7606244 | 7607297 | + | XM_039048236.1 | Bhi11g00331 | 49043 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi11g00331 | 178 | SMART | ring_2 | 96 | 137 | IPR001841 | - | |
| Bhi11g00331 | 178 | ProSiteProfiles | Zinc finger RING-type profile. | 96 | 138 | IPR001841 | - | |
| Bhi11g00331 | 178 | SUPERFAMILY | RING/U-box | 75 | 144 | - | - | |
| Bhi11g00331 | 178 | SMART | FANCL_C_2 | 92 | 146 | - | - | |
| Bhi11g00331 | 178 | Pfam | Ring finger domain | 95 | 138 | IPR001841 | - | |
| Bhi11g00331 | 178 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED | 1 | 166 | - | - | |
| Bhi11g00331 | 178 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 58 | 142 | IPR013083 | - | |
| Bhi11g00331 | 178 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 166 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi09g02840 | Bhi-Chr9:75187962 | Bhi11g00331 | Bhi-Chr11:7606244 | 1.76E-61 | dispersed | |
| Bhi10g02338 | Bhi-Chr10:60962558 | Bhi11g00331 | Bhi-Chr11:7606244 | 3.95E-31 | dispersed | |
| Bhi11g00331 | Bhi-Chr11:7606244 | Bhi12g00054 | Bhi-Chr12:1376237 | 1.41E-23 | dispersed | |
| Bhi11g02241 | Bhi-Chr11:61366458 | Bhi11g00331 | Bhi-Chr11:7606244 | 1.15E-17 | dispersed | |
| Bhi11g00331 | Bhi-Chr11:7606244 | Bhi04g00792 | Bhi-Chr4:19726080 | 1.24E-22 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi11g00331 | - | - | csv:116402645 | 305.449 |