Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00335 AAGCGTCCCCTCACAATTCCGAACCAAATAAAAGGCCATCGATGTTCCATAACCACTTGTGGAGGTCCAAGTTCTGATGGCGATTGCTCTCCTTCAAGGCGTGCAGCTCCTGCTCGAGAGAAAGTAGAAATAGACAACGTCGAATTCAAATTTCAGAACCACGTTGCTGAACGGACTATCCGATAGCAAAAAGAAGAGGAACGGTTACATGTAGGTGATCTTTTAGGGTTTCTTTCTTGGGTTGCATGTTCCTAAAATTACCACCAAAGATCAAAGCAGCAATTTCTATTTCCAGAGCTCGGTTTTCCAGGATTCTCCCTTTGGAACTGGAGATGTGTGACGCGATGGAGAAAGAGGAATCTGCACAAGATGTTTCAGTTGCATTAAGTGAAGGCGACCAAGTTAATGCAAAAGATGAGCTCCATGAATCTCTCTCTGTGCCAGCTGAGGCAACTCCAAACTCTTGTGAAAAAGGGTTTGGTTCACCTGAGACTCATGTACAGGAAGTAGATAAACCTACGATTCCTCAGCAATCAAATCAAAATTCTGCGCGCTCACTTCCCTTGGATCATGACCAAGAGTTGGACAAGCCTGATGCTGAACCTGCTTCTGATGTCAAGACTGGCCCTGATGAGATGCCCCCAAGGGAGCTAGATGCTGGTATTTCTAACTCTCCCCTAGAAACTGTTCAGTCCTCCATGGATGCCAAATCTGAGGCCGTTGATATGCCTGAAACTAAAACCGGTTCTCTTGATGATGCTTCAACAGCAAGTCCTGTAACTCCCCATCCAGTGTCATCTTGTGTTAAAGCTGAAACAGAGAATGCCATAGAATTGAAGGTCAATGAAGACAGTGTTACTACACCTCATAATGGGGATTCAAACATGAATCACTCGTTTATTTTTGATGAAAATCATATTGCTGAAGGTAGTGAATCAGGAACAGAAGAAGAGCAATCTGCTTTCATGAAGGAGCTTGAAAACTTCTTCAGAGAAAGAAGCCTGGAATTCAAACCTCCTAAGTTTTATGGAGAGGGTCTGAATTGCCTCAAGTTATGGAGGGCTGTTACTAGATTGGGAGGCTATGACAAGGTGACTTCATGCAAGTTGTGGCGGCAAGTAGGCGAGTCTTTCAAGCCCCCAAAGACATGCACAACTGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCTCTCCTTGATTATGAGAGGCATAAAACCAACGGTGGCGAACTCAGTGTACCTATTGCTTCCAACTCAGAACCTATGAGTATTGAAAACCAGGGATCAGGATCAGGTAGAGCACGAAGAGATGCTGCAGCACGTGCCATGCAGGGTTGGCACTCGCAACGTCTTTTGGGAAATGGTGAAGTTAGTGACCCCATTATCAAGGATAAGAACTCACTTTCAATGCAGAAAAGGGAAAAACAACTTAAAAGCATTGGCTTTAAACGTAAGAAACCCGCTTACATGGAACATGCCATGAAATCAACACGTACAAAATCACCAAAACCACAGTTGGATGTAGCAGTAGTTGATATTGGACAACCAGCTGACTGGGTCAAGGTCAATGTGCAGAAAACTAAAGATTGTTATGAGGTCTATGCATTAGTTCCCGGACTACTCCGTGAGGAGGTGCGTGTCCAGTCTGATCCAGCAGGACGCTTGGTCATTAGTGGTGAACCTGAACATCCTGATAATCCTTGGGGTGTCACACCCTTCAAAAAGGTGGTTAGCTTACCGTCAAGGATTGATCCACATCAGACTTCTGCCGTTGTCACCTTACATGGGCAGTTGTTTGTTCGTGTTCCATTCGAACAGTCGGAATGAAGTTGCTACATACTCCACTCGAATCTCAATGTTCAGACCGATCTTGTAGTTTGATATGTTAGTCTGTTTTATAATGTTAATAACAGTGGCATAAACCGTTTAGCTAGGCAGGAAATATGATTTTGTTTTGTAAGATCTTTGGTAGTGGTTAGCTGGCATCGAAGAGCTATTATTGTATCTTATGTGGAAGCCTCTTCTAATCTAAGGTAGTTAGTTCACAAATCTGCCGTCTAATTAGCCCCTTACTGCTTATTTATAGTATAAAGTTCATTTATTCTTCGCAA 2113 43.4 MFLKLPPKIKAAISISRARFSRILPLELEMCDAMEKEESAQDVSVALSEGDQVNAKDELHESLSVPAEATPNSCEKGFGSPETHVQEVDKPTIPQQSNQNSARSLPLDHDQELDKPDAEPASDVKTGPDEMPPRELDAGISNSPLETVQSSMDAKSEAVDMPETKTGSLDDASTASPVTPHPVSSCVKAETENAIELKVNEDSVTTPHNGDSNMNHSFIFDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSMQKREKQLKSIGFKRKKPAYMEHAMKSTRTKSPKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7681900 7691529 - XM_039048817.1 Bhi11g00335 49047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00335 527 SUPERFAMILY ARID-like 228 335 IPR036431 GO:0003677
Bhi11g00335 527 MobiDBLite consensus disorder prediction 107 132 - -
Bhi11g00335 527 SMART bright_3 235 326 IPR001606 GO:0003677
Bhi11g00335 527 MobiDBLite consensus disorder prediction 332 355 - -
Bhi11g00335 527 MobiDBLite consensus disorder prediction 332 349 - -
Bhi11g00335 527 MobiDBLite consensus disorder prediction 89 106 - -
Bhi11g00335 527 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 37 526 IPR045147 GO:0006357
Bhi11g00335 527 ProSiteProfiles ARID domain profile. 234 325 IPR001606 GO:0003677
Bhi11g00335 527 Gene3D - 234 332 IPR036431 GO:0003677
Bhi11g00335 527 SMART ARID_2 231 321 - -
Bhi11g00335 527 CDD ACD_sHsps_p23-like 446 522 - -
Bhi11g00335 527 Pfam Hsp20/alpha crystallin family 444 526 IPR002068 -
Bhi11g00335 527 MobiDBLite consensus disorder prediction 167 181 - -
Bhi11g00335 527 MobiDBLite consensus disorder prediction 50 184 - -
Bhi11g00335 527 CDD ARID 239 321 - -
Bhi11g00335 527 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 37 526 - -
Bhi11g00335 527 Gene3D - 423 527 IPR008978 -
Bhi11g00335 527 Pfam ARID/BRIGHT DNA binding domain 237 321 IPR001606 GO:0003677
Bhi11g00335 527 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 427 527 IPR002068 -
Bhi11g00335 527 SUPERFAMILY HSP20-like chaperones 438 523 IPR008978 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00335 Bhi-Chr11:7681900 Bhi11g00337 Bhi-Chr11:7681900 0 dispersed
Bhi11g00334 Bhi-Chr11:7681900 Bhi11g00335 Bhi-Chr11:7681900 0 tandem
Bhi11g00335 Bhi-Chr11:7681900 Bhi11g00336 Bhi-Chr11:7681900 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2300 PF00011 HSP20 6.00E-06 CL0190 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00335 - - bhj:120091028 1035.02