Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00336 CAAGCGTCCCCTCACAATTCCGAACCAAATAAAAGGCCATCGATGTTCCATAACCACTTGTGGAGGTCCAAGTTCTGATGGCGATTGCTCTCCTTCAAGGCGTGCAGCTCCTGCTCGAGAGAAAGTAGAAATAGACAACGTCGAATTCAAATTTCAGAACCACGTTGCTGAACGGACTATCCGATAGCAAAAAGAAGAGGAACGGTTACATGTAGGTGATCTTTTAGGGTTTCTTTCTTGGGTTGCATGTTCCTAAAATTACCACCAAAGATCAAAGCAGCAATTTCTATTTCCAGAGCTCGGTTTTCCAGTTGTAGGATTCTCCCTTTGGAACTGGAGATGTGTGACGCGATGGAGAAAGAGGAATCTGCACAAGATGTTTCAGTTGCATTAAGTGAAGGCGACCAAGTTAATGCAAAAGATGAGCTCCATGAATCTCTCTCTGTGCCAGCTGAGGCAACTCCAAACTCTTGTGAAAAAGGGTTTGGTTCACCTGAGACTCATGTACAGGAAGTAGATAAACCTACGATTCCTCAGCAATCAAATCAAAATTCTGCGCGCTCACTTCCCTTGGATCATGACCAAGAGTTGGACAAGCCTGATGCTGAACCTGCTTCTGATGTCAAGACTGGCCCTGATGAGATGCCCCCAAGGGAGCTAGATGCTGCAAGTCCTGTAACTCCCCATCCAGTGTCATCTTGTGTTAAAGCTGAAACAGAGAATGCCATAGAATTGAAGGTCAATGAAGACAGTGTTACTACACCTCATAATGGGGATTCAAACATGAATCACTCGTTTATTTTTGATGAAAATCATATTGCTGAAGGTAGTGAATCAGGAACAGAAGAAGAGCAATCTGCTTTCATGAAGGAGCTTGAAAACTTCTTCAGAGAAAGAAGCCTGGAATTCAAACCTCCTAAGTTTTATGGAGAGGGTCTGAATTGCCTCAAGTTATGGAGGGCTGTTACTAGATTGGGAGGCTATGACAAGGTGACTTCATGCAAGTTGTGGCGGCAAGTAGGCGAGTCTTTCAAGCCCCCAAAGACATGCACAACTGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCTCTCCTTGATTATGAGAGGCATAAAACCAACGGTGGCGAACTCAGTGTACCTATTGCTTCCAACTCAGAACCTATGAGTATTGAAAACCAGGGATCAGGATCAGGTAGAGCACGAAGAGATGCTGCAGCACGTGCCATGCAGGGTTGGCACTCGCAACGTCTTTTGGGAAATGGTGAAGTTAGTGACCCCATTATCAAGGATAAGAACTCACTTTCAATGCAGAAAAGGGAAAAACAACTTAAAAGCATTGGCTTTAAACGTAAGAAACCCGCTTACATGGAACATGCCATGAAATCAACACGTACAAAATCACCAAAACCACAGTTGGATGTAGCAGTAGTTGATATTGGACAACCAGCTGACTGGGTCAAGGTCAATGTGCAGAAAACTAAAGATTGTTATGAGGTCTATGCATTAGTTCCCGGACTACTCCGTGAGGAGGTGCGTGTCCAGTCTGATCCAGCAGGACGCTTGGTCATTAGTGGTGAACCTGAACATCCTGATAATCCTTGGGGTGTCACACCCTTCAAAAAGGTGGTTAGCTTACCGTCAAGGATTGATCCACATCAGACTTCTGCCGTTGTCACCTTACATGGGCAGTTGTTTGTTCGTGTTCCATTCGAACAGTCGGAATGAAGTTGCTACATACTCCACTCGAATCTCAATGTTCAGACCGATCTTGTAGTTTGATATGTTAGTCTGTTTTATAATGTTAATAACAGTGGCATAAACCGTTTAGCTAGGCAGGAAATATGATTTTGTTTTGTAAGATCTTTGGTAGTGGTTAGCTGGCATCGAAGAGCTATTATTGTATCTTATGTGGAAGCCTCTTCTAATCTAAGGTAGTTAGTTCACAAATCTGCCGTCTAATTAGCCCCTTACTGCTTATTTATAGTATAAAGTTCATTTATTCTTCGCAA 2012 43.34 MFLKLPPKIKAAISISRARFSSCRILPLELEMCDAMEKEESAQDVSVALSEGDQVNAKDELHESLSVPAEATPNSCEKGFGSPETHVQEVDKPTIPQQSNQNSARSLPLDHDQELDKPDAEPASDVKTGPDEMPPRELDAASPVTPHPVSSCVKAETENAIELKVNEDSVTTPHNGDSNMNHSFIFDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSMQKREKQLKSIGFKRKKPAYMEHAMKSTRTKSPKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7681900 7691530 - XM_039048819.1 Bhi11g00336 49048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00336 493 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 41 492 IPR045147 GO:0006357
Bhi11g00336 493 SUPERFAMILY ARID-like 194 301 IPR036431 GO:0003677
Bhi11g00336 493 ProSiteProfiles ARID domain profile. 200 291 IPR001606 GO:0003677
Bhi11g00336 493 Gene3D - 389 493 IPR008978 -
Bhi11g00336 493 CDD ARID 205 287 - -
Bhi11g00336 493 Gene3D - 200 298 IPR036431 GO:0003677
Bhi11g00336 493 SUPERFAMILY HSP20-like chaperones 404 489 IPR008978 -
Bhi11g00336 493 MobiDBLite consensus disorder prediction 65 151 - -
Bhi11g00336 493 MobiDBLite consensus disorder prediction 109 134 - -
Bhi11g00336 493 Pfam ARID/BRIGHT DNA binding domain 203 287 IPR001606 GO:0003677
Bhi11g00336 493 MobiDBLite consensus disorder prediction 298 321 - -
Bhi11g00336 493 SMART ARID_2 197 287 - -
Bhi11g00336 493 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 41 492 - -
Bhi11g00336 493 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 393 493 IPR002068 -
Bhi11g00336 493 Pfam Hsp20/alpha crystallin family 410 492 IPR002068 -
Bhi11g00336 493 MobiDBLite consensus disorder prediction 91 108 - -
Bhi11g00336 493 MobiDBLite consensus disorder prediction 298 315 - -
Bhi11g00336 493 SMART bright_3 201 292 IPR001606 GO:0003677
Bhi11g00336 493 CDD ACD_sHsps_p23-like 412 488 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00335 Bhi-Chr11:7681900 Bhi11g00336 Bhi-Chr11:7681900 0 tandem
Bhi11g00336 Bhi-Chr11:7681900 Bhi11g00337 Bhi-Chr11:7681900 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2301 PF00011 HSP20 5.40E-06 CL0190 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00336 - - bhj:120091028 947.577