Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00337 AAGCGTCCCCTCACAATTCCGAACCAAATAAAAGGCCATCGATGTTCCATAACCACTTGTGGAGGTCCAAGTTCTGATGGCGATTGCTCTCCTTCAAGGCGTGCAGCTCCTGCTCGAGAGAAAGTAGAAATAGACAACGTCGAATTCAAATTTCAGAACCACGTTGCTGAACGGACTATCCGATAGCAAAAAGAAGAGGAACGGTTACATGTAGGTGATCTTTTAGGGTTTCTTTCTTGGGTTGCATGTTCCTAAAATTACCACCAAAGATCAAAGCAGCAATTTCTATTTCCAGAGCTCGGTTTTCCAGTTGTAGGATTCTCCCTTTGGAACTGGAGATGTGTGACGCGATGGAGAAAGAGGAATCTGCACAAGATGTTTCAGTTGCATTAAGTGAAGGCGACCAAGTTAATGCAAAAGATGAGCTCCATGAATCTCTCTCTGTGCCAGCTGAGGCAACTCCAAACTCTTGTGAAAAAGGGTTTGGTTCACCTGAGACTCATGTACAGGAAGTAGATAAACCTACGATTCCTCAGCAATCAAATCAAAATTCTGCGCGCTCACTTCCCTTGGATCATGACCAAGAGTTGGACAAGCCTGATGCTGAACCTGCTTCTGATGTCAAGACTGGCCCTGATGAGATGCCCCCAAGGGAGCTAGATGCTGGTATTTCTAACTCTCCCCTAGAAACTGTTCAGTCCTCCATGGATGCCAAATCTGAGGCCGTTGATATGCCTGAAACTAAAACCGGTTCTCTTGATGATGCTTCAACAGCAAGTCCTGTAACTCCCCATCCAGTGTCATCTTGTGTTAAAGCTGAAACAGAGAATGCCATAGAATTGAAGGTCAATGAAGACAGTGTTACTACACCTCATAATGGGGATTCAAACATGAATCACTCGTTTATTTTTGATGAAAATCATATTGCTGAAGGTAGTGAATCAGGAACAGAAGAAGAGCAATCTGCTTTCATGAAGGAGCTTGAAAACTTCTTCAGAGAAAGAAGCCTGGAATTCAAACCTCCTAAGTTTTATGGAGAGGGTCTGAATTGCCTCAAGTTATGGAGGGCTGTTACTAGATTGGGAGGCTATGACAAGGTGACTTCATGCAAGTTGTGGCGGCAAGTAGGCGAGTCTTTCAAGCCCCCAAAGACATGCACAACTGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCTCTCCTTGATTATGAGAGGCATAAAACCAACGGTGGCGAACTCAGTGTACCTATTGCTTCCAACTCAGAACCTATGAGTATTGAAAACCAGGGATCAGGATCAGGTAGAGCACGAAGAGATGCTGCAGCACGTGCCATGCAGGGTTGGCACTCGCAACGTCTTTTGGGAAATGGTGAAGTTAGTGACCCCATTATCAAGGATAAGAACTCACTTTCAATGCAGAAAAGGGAAAAACAACTTAAAAGCATTGGCTTTAAACGTAAGAAACCCGCTTACATGGAACATGCCATGAAATCAACACGTACAAAATCACCAAAACCACAGTTGGATGTAGCAGTAGTTGATATTGGACAACCAGCTGACTGGGTCAAGGTCAATGTGCAGAAAACTAAAGATTGTTATGAGGTCTATGCATTAGTTCCCGGACTACTCCGTGAGGAGGTGCGTGTCCAGTCTGATCCAGCAGGACGCTTGGTCATTAGTGGTGAACCTGAACATCCTGATAATCCTTGGGGTGTCACACCCTTCAAAAAGGTGGTTAGCTTACCGTCAAGGATTGATCCACATCAGACTTCTGCCGTTGTCACCTTACATGGGCAGTTGTTTGTTCGTGTTCCATTCGAACAGTCGGAATGAAGTTGCTACATACTCCACTCGAATCTCAATGTTCAGACCGATCTTGTAGTTTGATATGTTAGTCTGTTTTATAATGTTAATAACAGTGGCATAAACCGTTTAGCTAGGCAGGAAATATGATTTTGTTTTGTAAGATCTTTGGTAGTGGTTAGCTGGCATCGAAGAGCTATTATTGTATCTTATGTGGAAGCCTCTTCTAATCTAAGGTAGTTAGTTCACAAATCTGCCGTCTAATTAGCCCCTTACTGCTTATTTATAGTATAAAGTTCATTTATTCTTCGCAA 2119 43.37 MFLKLPPKIKAAISISRARFSSCRILPLELEMCDAMEKEESAQDVSVALSEGDQVNAKDELHESLSVPAEATPNSCEKGFGSPETHVQEVDKPTIPQQSNQNSARSLPLDHDQELDKPDAEPASDVKTGPDEMPPRELDAGISNSPLETVQSSMDAKSEAVDMPETKTGSLDDASTASPVTPHPVSSCVKAETENAIELKVNEDSVTTPHNGDSNMNHSFIFDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSMQKREKQLKSIGFKRKKPAYMEHAMKSTRTKSPKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7681900 7691529 - XM_039048816.1 Bhi11g00337 49049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00337 529 SMART bright_3 237 328 IPR001606 GO:0003677
Bhi11g00337 529 SUPERFAMILY ARID-like 230 337 IPR036431 GO:0003677
Bhi11g00337 529 MobiDBLite consensus disorder prediction 169 183 - -
Bhi11g00337 529 Pfam ARID/BRIGHT DNA binding domain 239 323 IPR001606 GO:0003677
Bhi11g00337 529 CDD ARID 241 323 - -
Bhi11g00337 529 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 39 528 - -
Bhi11g00337 529 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 429 529 IPR002068 -
Bhi11g00337 529 SMART ARID_2 233 323 - -
Bhi11g00337 529 Gene3D - 236 334 IPR036431 GO:0003677
Bhi11g00337 529 Gene3D - 425 529 IPR008978 -
Bhi11g00337 529 CDD ACD_sHsps-like 444 524 - -
Bhi11g00337 529 MobiDBLite consensus disorder prediction 109 134 - -
Bhi11g00337 529 MobiDBLite consensus disorder prediction 334 357 - -
Bhi11g00337 529 MobiDBLite consensus disorder prediction 334 351 - -
Bhi11g00337 529 MobiDBLite consensus disorder prediction 66 186 - -
Bhi11g00337 529 SUPERFAMILY HSP20-like chaperones 440 525 IPR008978 -
Bhi11g00337 529 MobiDBLite consensus disorder prediction 91 108 - -
Bhi11g00337 529 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 39 528 IPR045147 GO:0006357
Bhi11g00337 529 Pfam Hsp20/alpha crystallin family 446 528 IPR002068 -
Bhi11g00337 529 ProSiteProfiles ARID domain profile. 236 327 IPR001606 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00334 Bhi-Chr11:7681900 Bhi11g00337 Bhi-Chr11:7681900 0 dispersed
Bhi11g00335 Bhi-Chr11:7681900 Bhi11g00337 Bhi-Chr11:7681900 0 dispersed
Bhi11g00336 Bhi-Chr11:7681900 Bhi11g00337 Bhi-Chr11:7681900 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2302 PF00011 HSP20 6.00E-06 CL0190 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00337 - - bhj:120091028 1033.48