Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00345 CGCAGGACCCTTCATTTATTTCTTCCATTTTGTTTAATTTCCTCCTCCGTCCGTAACTCAGAGACCGAGGCAGAAGTAGCTCAATAATTCCATCTTATCTTAATGGCCAAATTAACCACAAAACCCCTTCAGTTTTGCTGCTTCTTCTTCATCCTCTTGTTTCCGATACTTCCGGCTACCTCTTCAGTGGATCTTGTGCAGACAGAATGCTTGAAGGTACCCTTCTCCCAGTTCTCTAACTCACTTCTCTCCACCATCGACGGTGTACGACAGGTGATGACCATTTTCTCTCCATTCACTAAATTACTGGGTGATTTACGGCTTTCCACCGCCATTTCCGACTGTCTCGATTTGCTCGACTCTTCTGTTGATCAGTTGAGCTGGTCCCTCTCCGCCACCCAAAATCCCAAGGCTAAAGACTACAGCACAGGAGATCTGAGTTCTGATCTGAAGACATGGCTGAGCGCTGCAGTGGTTAATCCAGAAACATGCATTGATGGATTTGAGGGCACCAATAGCTTTATCAAAGGTCTTGTATCCGGGGGCATCGACCAGTTAACTTCACAGCTCTATGACCTTCTTTCCATGGTGAAATCTTTCCCCAATAATCAGCCGGCTGAGTTTCCTTCATGGGTGAAATCTGAGGACCGGAATCTGCTGCATCTAAATGACTTGGCTGCCGATGCCACTGTGGCCGCCGATGGGACTGGGGATTTCACCAGTGTGATGGATGCGGTTCGAGCGGCCCCTGACAATAGCATACAACGTTATGTTATATACATTAAGAGGGGTGTGTATTTGGAGAACGTGGAGATCAAGAAGAAGAAGTGGAATCTCATGATGATTGGAGATGGAATCGATGCCACCATCATATCGGGTAAGCGGAATTTTGTTGACGGTTGGACAACATTCCGCTCAGCGACCTTTGCTGTAAGTGGAAGAGGATTCATAGCGCGAGACATAACATTCGAGAATACTGCAGGGCCAGAGAAACATCAAGCAGTGGCACTTAGATCCGACTCGGATCTATCGGTATTTTTTCGATGCCGAATTAGAGGGTACCAAGACACGCTGTATACGCACACCATGCGCCAATTCTACCGCGAGTGCCAAATCAGTGGCACCGTTGATTTTCTGTTCGGCGATGGCACCGTTGTTTTCCAAAACTGCACCATCCTCGCGAAGAAGGGTCTTCCCAACCAGAAAAACACCATCACTGCTCAGGGCCGGAAAGACCCAAACCAACCCACCGGCTTCTCCATTCAATTCTGCAACATCTCTGCGGACTCAGACCTTGAACCCTTGGTTAACACCACGGCAACGTACCTTGGAAGACCATGGAAGGAATATTCCAGAACCATTATCATGCAGTCATATATGAGCGACGCCATTAGGCCAGAAGGTTGGCTTGAGTGGAACGGCGATTTTGCATTGAATACACTATTCTATGCTGAGTTTATGAATCATGGGCCGGGGGCGCGATTGGCGAAGCGTGTCAATTGGCCCGGTTACCGCCGACTGAATCATACCAGTGAAGCTACTAACTTCACCGTGGCTCAATTCATTGAAGGAAACATGTGGTTGCCGTCCACGGGTGTCAAATTCACTGCAGGACTCGGAGCTAATTAATTTGGGAGTAATACGATCGTCTTAAAATATTTTTTAAAAGTGATAAAAATATTTCTTTAATGTGATAATTTATGATTGGACGATTCAATGGAATACCTAAAGATAAGTGTAACAATGTCACTAAATATTTTTATTTTGTAATTAAAGTTAATATTTTTAAGAAGACCTATAAATTACCACCAAATCTTCATTCCTC 1825 45.48 MAKLTTKPLQFCCFFFILLFPILPATSSVDLVQTECLKVPFSQFSNSLLSTIDGVRQVMTIFSPFTKLLGDLRLSTAISDCLDLLDSSVDQLSWSLSATQNPKAKDYSTGDLSSDLKTWLSAAVVNPETCIDGFEGTNSFIKGLVSGGIDQLTSQLYDLLSMVKSFPNNQPAEFPSWVKSEDRNLLHLNDLAADATVAADGTGDFTSVMDAVRAAPDNSIQRYVIYIKRGVYLENVEIKKKKWNLMMIGDGIDATIISGKRNFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFFRCRIRGYQDTLYTHTMRQFYRECQISGTVDFLFGDGTVVFQNCTILAKKGLPNQKNTITAQGRKDPNQPTGFSIQFCNISADSDLEPLVNTTATYLGRPWKEYSRTIIMQSYMSDAIRPEGWLEWNGDFALNTLFYAEFMNHGPGARLAKRVNWPGYRRLNHTSEATNFTVAQFIEGNMWLPSTGVKFTAGLGAN 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7984426 7986563 - XM_039049380.1 Bhi11g00345 49057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00345 508 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 166 IPR035513 -
Bhi11g00345 508 SUPERFAMILY Pectin lyase-like 192 504 IPR011050 -
Bhi11g00345 508 PANTHER PECTINESTERASE 170 505 - -
Bhi11g00345 508 PANTHER PECTINESTERASE 37 165 - -
Bhi11g00345 508 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 170 505 - -
Bhi11g00345 508 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 37 165 - -
Bhi11g00345 508 Pfam Pectinesterase 194 491 IPR000070 GO:0030599|GO:0042545
Bhi11g00345 508 Gene3D - 188 505 IPR012334 -
Bhi11g00345 508 SMART PMEI_2 27 166 IPR006501 GO:0004857
Bhi11g00345 508 CDD PMEI-like_4 22 165 - -
Bhi11g00345 508 Pfam Plant invertase/pectin methylesterase inhibitor 75 153 IPR006501 GO:0004857
Bhi11g00345 508 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 166 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g02061 Bhi-Chr2:56177226 Bhi11g00345 Bhi-Chr11:7984426 8.91E-169 dispersed
Bhi11g00345 Bhi-Chr11:7984426 Bhi12g00014 Bhi-Chr12:343394 2.16E-147 dispersed
Bhi11g00345 Bhi-Chr11:7984426 Bhi12g00634 Bhi-Chr12:19483377 8.37E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00345 K01051 - csv:116402691 869.381