Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00352 ATGGCTTCTCATTTCCCTCGTCGAAGCTTTATCATCGTCATGATCTTCTTCTTTTCGTTTATGATGCCAGAGATTACAATTAAATCAGTGATCGCCATCTTTCGACCAAGCCCTTGGAAGCTTGCCCATGCCACCTTTTATGGCGATGAGACAGCATCCGAAACAATGGGAGGAGCTTGTGGTTATGGAAACTTATTCACAAATGGCTACGGCGTCGACACGGTGGCTCTAAGTTCTACCCTCTTCAACAATGGCTACGCTTGTGGAACTTGCTTTCAAATCAAATGCGCCCAATCCAAAGCTTGCTACCCTAATGTTGCTTTCACGACGGTGACGGCGACCAACCTTTGTCCCCCGAATTGGGCGAAACCATCCAACAACGGTGGGTGGTGCAACCCTCCGAGGGTGCACTTCGACATGTCGAAGCCAGCCTTTATGAAGATCGCCAATTGGAAGGTCGGGATCATCCCCGTCGTGTACCGACGAGTTCCGTGCGGTAAAAAGGGCGGCCTTCGATTCACATTACAAGGAAATGGTTACTGGCTTTTGGCGTACGTGATGAATGTCGGCGGTGGCGGAGATGTGTCGGGAATGTGGGTGAAAGGTAGCAAAACAGGATGGATCAAAATGAGCCATAATTGGGGAGCTTCATATCAAGCATTTTCATCTTTGGTTGGCCAATCTTTGTCTTTTAGAATCACTTCTTACACAACCAAAGAGACCATCACGGCTTGGAATGTTGCTCCTTCTAATTGGAGGTTTGGCTTGACCTACAATGGCAACGTCAACTTTCGTTGA 798 47.99 MASHFPRRSFIIVMIFFFSFMMPEITIKSVIAIFRPSPWKLAHATFYGDETASETMGGACGYGNLFTNGYGVDTVALSSTLFNNGYACGTCFQIKCAQSKACYPNVAFTTVTATNLCPPNWAKPSNNGGWCNPPRVHFDMSKPAFMKIANWKVGIIPVVYRRVPCGKKGGLRFTLQGNGYWLLAYVMNVGGGGDVSGMWVKGSKTGWIKMSHNWGASYQAFSSLVGQSLSFRITSYTTKETITAWNVAPSNWRFGLTYNGNVNFR 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8260932 8262470 - XM_039050273.1 Bhi11g00352 49064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00352 265 SUPERFAMILY PHL pollen allergen 167 259 IPR036749 -
Bhi11g00352 265 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 57 170 IPR007112 -
Bhi11g00352 265 Gene3D - 23 165 IPR036908 -
Bhi11g00352 265 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 180 260 IPR007117 -
Bhi11g00352 265 PANTHER EXPANSIN-A15 15 265 IPR002963 GO:0009664
Bhi11g00352 265 Pfam Expansin C-terminal domain 172 249 IPR007117 -
Bhi11g00352 265 SMART dpbb_1 74 160 IPR007112 -
Bhi11g00352 265 Gene3D - 166 265 IPR036749 -
Bhi11g00352 265 SUPERFAMILY Barwin-like endoglucanases 38 188 IPR036908 -
Bhi11g00352 265 Pfam Lytic transglycolase 74 160 IPR009009 -
Bhi11g00352 265 PRINTS Expansin signature 69 83 IPR002963 GO:0009664
Bhi11g00352 265 PRINTS Expansin signature 109 119 IPR002963 GO:0009664
Bhi11g00352 265 PRINTS Expansin signature 128 145 IPR002963 GO:0009664
Bhi11g00352 265 PRINTS Expansin signature 145 158 IPR002963 GO:0009664
Bhi11g00352 265 PRINTS Expansin signature 169 181 IPR002963 GO:0009664
Bhi11g00352 265 PRINTS Expansin signature 181 202 IPR002963 GO:0009664
Bhi11g00352 265 PRINTS Expansin signature 246 262 IPR002963 GO:0009664
Bhi11g00352 265 PANTHER EXPANSIN-A7 15 265 - -
Bhi11g00352 265 PRINTS Expansin/Lol pI family signature 38 53 IPR007118 GO:0005576
Bhi11g00352 265 PRINTS Expansin/Lol pI family signature 56 74 IPR007118 GO:0005576
Bhi11g00352 265 PRINTS Expansin/Lol pI family signature 78 96 IPR007118 GO:0005576
Bhi11g00352 265 PRINTS Expansin/Lol pI family signature 153 169 IPR007118 GO:0005576
Bhi11g00352 265 PRINTS Expansin/Lol pI family signature 207 221 IPR007118 GO:0005576
Bhi11g00352 265 PRINTS Expansin/Lol pI family signature 246 260 IPR007118 GO:0005576
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi11g00352 Bhi12g00340 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01147 Bhi-Chr10:24063003 Bhi11g00352 Bhi-Chr11:8260932 6.35E-38 dispersed
Bhi11g00352 Bhi-Chr11:8260932 Bhi12g00340 Bhi-Chr12:10448928 4.17E-154 dispersed
Bhi11g00352 Bhi-Chr11:8260932 Bhi08g00598 Bhi-Chr8:19742027 1.32E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00352 - - csv:101207770 520.39