Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi11g00361 | AGGGCGGGAAGCGGGAACCGGACGGGCTGAGTTTTTCCTGAATTTGTTATACTCAGCCCCCGAGCATCCCCATTCATCTGTGCAAAATACAGAAAAAAGAAAAAAAGGAAATCTATGGCCTCTTCTTCCGGCAGCAGTAGCAGCTACGACATGCCATGGGTGGAGAAGTACAGGCCCAGTACGGTCGTTGACATTGTGGGCAATGAAGATGCAGTTTCTCGGCTCCAAGTCATTGCTCGCGACGGCAACATGCCCAATCTCATACTATCTGGTCCTCCGGGAACTGGGAAGACAACCAGTATTTTGGCTCTTGCTCACGAGCTTTTGGGACCAAATTACAAGGAGGGTGTTCTGGAGCTTAATGCATCAGATGATAGGGGAATAGATGTTGTGAGGAACAAAATCAAGATGTTTGCCCAAAAGAAAGTAACCTTGCCTCCTGGTCGACACAAAATGGTAATATTGGATGAAGCTGACAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATATATTCAAACACAACACGTTTTGCCCTTGCATGTAATACCTCCTCAAAAATTATTGAGCCTATTCAGAGTAGATGTGCAATTGTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTGCTTCAAGCAGAAAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACCGCTGATGGTGATATGAGGCAGGCGCTGAATAATTTGCAAGCTACATATAGTGGATTCCGCTTTGTAAACCAGGACAATGTTTTCAAGGTTTGTGATCAACCGCATCCGCTGCATGTGAAGAATGTGGTGCGCAATGTGCTTGAAGGTAAATTTGACGATGCTTGTGCAGGTCTAAAGCAACTCTACGACTTAGGCTATTCTCCCACTGACATAATAACCACTCTTTTCCGTATCATTAAGAACTACGATATGGCCGAATATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCCCATATGAGAATTTGTGACGGAGTTGGTTCTTACCTTCAGCTGTGCGGTCTTTTGGCCAAGCTTTCCATGGTTCGTGAGACTGCAAAAGCGCCATGAGCAGTCAACATGTAGAGGCTGCTTAAATTTGGTTCAAAGGGGAAGGTATTATGAATTTAAACATCCGTGTTCCTTAGGATATTAACTATATATTTTTGTACCATGTAATCAGATTGAGCACAAAATTTAGCATGTTACTTACTATCATCTTACTAAGGTTTTAGGCCAGTGGCATTCTTGTCAAGGTTTTTCTCTCCCCCACCTCACTAGTAGTAGGTACAAACAAGCCTTGAAATGTTCATGATTCACAATCGTTAAAAGCTTTTGGTTTCAAATGTCTAGGATCTAA | 1399 | 43.17 | MASSSGSSSSYDMPWVEKYRPSTVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKMVILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSMVRETAKAP | 331 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 8642357 | 8651247 | - | XM_039049803.1 | Bhi11g00361 | 49073 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi11g00361 | 331 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 234 | 325 | IPR008921 | GO:0003677|GO:0006260 | |
| Bhi11g00361 | 331 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 7 | 329 | - | - | |
| Bhi11g00361 | 331 | Pfam | Replication factor C C-terminal domain | 235 | 320 | IPR013748 | - | |
| Bhi11g00361 | 331 | CDD | HLD_clamp_RFC | 170 | 232 | - | - | |
| Bhi11g00361 | 331 | Gene3D | - | 171 | 234 | - | - | |
| Bhi11g00361 | 331 | PANTHER | REPLICATION FACTOR C SUBUNIT 2 | 7 | 329 | - | - | |
| Bhi11g00361 | 331 | CDD | AAA | 28 | 165 | - | - | |
| Bhi11g00361 | 331 | Gene3D | - | 235 | 327 | - | - | |
| Bhi11g00361 | 331 | Gene3D | - | 7 | 170 | IPR027417 | - | |
| Bhi11g00361 | 331 | Pfam | ATPase family associated with various cellular activities (AAA) | 49 | 167 | IPR003959 | GO:0005524|GO:0016887 | |
| Bhi11g00361 | 331 | SMART | AAA_5 | 45 | 177 | IPR003593 | - | |
| Bhi11g00361 | 331 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 11 | 233 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi04g01892 | Bhi-Chr4:47588459 | Bhi11g00361 | Bhi-Chr11:8642357 | 1.42E-68 | dispersed | |
| Bhi09g02708 | Bhi-Chr9:72651921 | Bhi11g00361 | Bhi-Chr11:8642357 | 1.24E-62 | dispersed | |
| Bhi10g00209 | Bhi-Chr10:4454928 | Bhi11g00361 | Bhi-Chr11:8642357 | 1.37E-13 | dispersed | |
| Bhi10g00210 | Bhi-Chr10:4455153 | Bhi11g00361 | Bhi-Chr11:8642357 | 1.21E-13 | dispersed | |
| Bhi11g00361 | Bhi-Chr11:8642357 | Bhi03g02358 | Bhi-Chr3:51519906 | 1.27E-18 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi11g00361 | K10755 | - | csv:101208984 | 639.802 |