Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00397 TCAGTATCATACCTTTTCTTTATCCATCAAACCTAACCCTTTTTTAACTATAATCCCAAGACATCTTTTCATGGCCTCTACCTCCTCAAAGAGACATGATCAATACAAAGGAATCCGCTGCCGGAGCAGCAAATGGGTGTCGGAGATTCGTGAGCCACGTAAGACTACTCGAATATGGCTCGGTACCTATCCTACTCCCGAGATGGCTGCTGCTGCCTACGATGTAGCCGCACTCGCACTCAAGGGTTGCAATGCTGTTCTCAACTTCCCCGACTCGATCGGTTCCTATCCGGTTCCGGCTTCCACATCCCCAGCCGATATCCGTATTGCTGCCGCTGCTGCTGCCGCTTTGAGAAAAGTTGATGATCAAGGAGAAAGCAATTACCATAGCTCTCACTATCAGTGTCCGCCAACCAATGAGTTTGTCGACGAAGAGGCGCTGTTCGGAATGCCGAATCTGCTGGTTGACATGGCGGAGGGAATGCTGTTGTCACCGCCACGAATCAGCTCGTCGCCATCTCGACACGACTACTACTCATGGAACTCAAGTGGAGATGGAAATCTTTGGAGTTACCCCTAGAGGAAAAAAGAAACAAAAATTAACCATGAAAAAACTCCATGAATCCGAACATATCTAATTTAATCACATCATGGGGAAAAAAAATTAAGAAAAAAGGTAAAGAATTTAAGATCATCAAACGACAAGGATTTGGAAAAAATTAGAATAATAATGAATATGTTTTTGCTTCATTGAGAAGGTGTTTAGAACAGTACTAGAGAGAGTAAAAAACATGAATGAAGTGAGTTTTAGATTTGGATAGGGACACGGTTTTGGCTGGAAAATTGGAAAAGGAGAGATTTTGAGTTGGATTATGTCTGTTTTTTTTCTCTCTCTTTTTTTATTTTTATTTTTATTATGAGATAAAGTAAGAGAGAGATTGTGGTATTGTGGATTTTGATTGGTCCACATTTTTTTTTTTTTTTTTTTTTGTGTTTGAATTATGAATTTTGGTTTGTACCAAATCTATGAACTACAGTTGTCGGTAATAATTTGGTT 1057 40.11 MASTSSKRHDQYKGIRCRSSKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPDSIGSYPVPASTSPADIRIAAAAAAALRKVDDQGESNYHSSHYQCPPTNEFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHDYYSWNSSGDGNLWSYP 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9439334 9440390 + XM_039049671.1 Bhi11g00397 49109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00397 169 CDD AP2 11 69 IPR001471 GO:0003700|GO:0006355
Bhi11g00397 169 ProSiteProfiles AP2/ERF domain profile. 11 67 IPR001471 GO:0003700|GO:0006355
Bhi11g00397 169 SMART rav1_2 11 75 IPR001471 GO:0003700|GO:0006355
Bhi11g00397 169 Gene3D AP2/ERF domain 10 68 IPR036955 GO:0003700|GO:0006355
Bhi11g00397 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 5 168 - -
Bhi11g00397 169 SUPERFAMILY DNA-binding domain 11 69 IPR016177 GO:0003677
Bhi11g00397 169 Pfam AP2 domain 12 59 IPR001471 GO:0003700|GO:0006355
Bhi11g00397 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 168 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00397 Bhi-Chr11:9439334 Bhi12g00203 Bhi-Chr12:5877801 4.09E-50 dispersed
Bhi11g00397 Bhi-Chr11:9439334 Bhi01g01368 Bhi-Chr1:27439030 7.54E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2307 PF00847 AP2 2.20E-10 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00397 - - csv:101202953 289.656