Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00403 TTTTGAACGTGTAAATTATACATTGGATCGAACTTTCGATCAATAAACACATAGCAATCGAAATCCAGAAGAAACTTGGAAATTAGTGCCCCCAGAATTTGTACGAATTTGAATCCATCCCACAGCATCTAATACGGAACGTGAAGCGGCGTTGTTCCCTGTTTAACTTTATGCGTCACTTCCTTCCGCCGGGTTCCTTCCCGGCTTCAACAGAGCTCGTCGGAATTTGAATTCTGAAATTTTCCATTTGAAATTCGATTCCAATCATTACCCAATTCACCATTTTCGTTGATTTTGCCTTTTTGATTTCTGGGTCGGTGATAACTAACAAGAGGGTCACCGTCCTCGAACTTGGGGAGTAATTGGGTATGGCGGAAGGGGAATTTTCCGATCAGAATCGCCTTCTTAGATCTATGGAAGATCATAATGAGGAAGATCTTGATTTAGAATCACAAGATGGAAATGGAGTTCATCCATTGAGAAATAACAGTGGAAAACGAGGTGGGTTTCTGGATCTGCTTCATCATCTCAATCGAGGGAGCAGCTTCTCTGGTCGTCGTTTAAGTTATAAGCGTCTTGATATTGATAATCATAACGTTAATTTCAACCCTTCTTCTGTTAATATTGTTGGTAGAAGTCGTACGGCTTCTTCTTCTTCTTCTGATCGTCACAACAATTTCAATTCGCATTCTCTTCATGCCCCAACTGCAATCGATGGCGAAATTGACGACAATGTTGATGATACTGCCCCTCCTGAATGGGCTTTGTTGCTTATTGCATGTCTCCTTGGCCTCGCCACCGGTCTTTGTGTTGCAGCTTTTAACATTGGGGTACATGTTATCCATGAGTGGGCCTGGGCTGGCACTCCAAATGAGGGTGCTGCTTGGCTTCGCTTACAGAGAATCGCTGATACTTGGCATCGCATTCTCTTGATACCGGTAACCGGAGGTGTTATAGTGGGTATGATGCATGGTTTGCTTGAGATACTCAGCCAAATAAAACAGTCAAGTGCTTCCCAAGGGCAAGGATTTGATTTACTTTCTGGAGTCTTTCCTACAGTTAAAGCCATACAGGCAGCCATCACTTTAGGTACTGGTTGTTCATTGGGTCCTGAAGGACCTAGTGTAGATATTGGGAAATCTTGTGCCAATGGGTTCTATCTTATGATGGAAAACAACAGTGAAAAGATAAAAATAGCATTTGTTGCAGCTGGTGCAGCAGCTGGAATTGCTTCAGGCTTCAATGCAGCTGTTGCTGGTAGCTTCTTTGCAATAGAAACTGTATTAAGGCCACTGCGTGCAGAAAATTCACCTCCTTTTACGACTGCAATGATCATATTGGCATCTGTTATTTCATCTACAGTCTCAACTGTTTTACTTGGAACACAGTCTGCTTTTACAGTACCTGCATATGATTTGAAATCTGCTGCCGAACTTCCATTGTACTTGATATTGGGAATGCTATGTGGCGCTGTGAGTGTAGCAGTGACACGTTTAGTTGCTTGGTTTGGTAAATCATTTGAGTTCATCAAGGAAAGGTTCGGCCTTCCTCCTGTTGTCTGTCCTGCTTTAGGTGGTTTGGGAGCTGGAATAATAGCTCTCAAGTACCCAGGAATCCTATATTGGGGTTTCACAAATGTTGAAGAAATCCTACATACTGGGAATCGTCCTTCAGCTCCAGGGATTTGGTTATTAACTCAAATAGCAGCTGCAAAAGTTCTGGCTACAGCTCTGTGCAAGGGTTCTGGGCTCGTAGGTGGCCTTTATGCACCTAGTCTAATGATTGGTGCTGCTGTTGGTGCTGTATTTGGGGGCTCAGCTGTTGAAATCATTAATATTGCAATTCCTGGAAATGCGGCTGTTGCACAGCCACAAGCATATGCACTGGTTGGAATGGCTGCTACGCTGGCCTCAGTCTGTTCTGTACCTTTAACATCCGTTCTACTTCTGTTTGAGCTGACAAAGGATTATAGGATACTTCTTCCTCTCATGGGGGCCGTAGGCTTAGCCATATGGGTACCTTCAGTTACAAAACAGACCAAGGAAATCGAATCATCTGATAAGCGGGGTCTTGCCAGAGGTTATACTTCTCTTTCACCATCTGAACATAAAGATGGGGCACGTTGGAGATATGATAATGGTGACAATGACTTGGAGCTCTCTGAGGTAGTAAATCCATCTGGCCATGAATCTAGTTATAAAGATAATTTGCTCGAAGACCTAAAGGTTTCTCAAGCGATGTCAAAGAACTGTCTGAAGGTTTCATTGTCTATTTATCTGAAAGATGCTCTAAAATATATGAAAGATAACCAGCAGAACTGTGCATTAGTGGTTGACGATGATGATTTCCTTGAGGGGATCTTGACACATGGTGACATTAAACGATATCTCTTCAAGAAGTATGGTGATGCTTTCATGAGTGATTCACTGAGCGTGGATACCTGTCTCGTGTCCTCTATTTATACTCGAGGGATCAGTTATCGTGGGCGAGAACGGGGGATCTTAACATGTTATCCTGACACTACTCTGGCAACTGCCAAGGAACTTATGGAGGCTAAGGGTATAAAGCAGTTGCCCGTTGTTAAGCGTGGTAAAGAAAGGAAAAGAAGAATTGTAGCTGTTCTTCACTATGATTCAATTTTTAGCTGTCTCAGAGAGGTCATCAATCAAAGGGAAACAGTATATCCTAGTGGAAAAGAGATAGTTGCCCAAGAGACTGTTGCAGATGGTCATTAAGGAGCTGTGGAACATATTCAGAGCTCAAGTTTTCCAGCATTCAGTATTAAAGTACAAACTGAATGATGAACTGCAATGATCTTGTTTATTCAGAATTATTCCCGCTGATGACAGAATAGTTGCAACCATCTGGTTGGTCTTCAGAGAAGAGAGAAATTATATGGTGAGTAAAGTTGATATGTAATAATTTTCCAAGTGATTTAGCCAGTTGTATTTTACACAAAGTCAACTATCCAACATCTGTAACATAATACACAGATTAATTCAGAAGCAGAGATGAACATTGAGAGAAAAACATGAAAAACATGTTGGCCTTTGATGGTGTACTGAGAATTCAGGCTGTGAGGGATCCATATGGTTTATTAGGGTATATATGGTCCATACCCGTTGAAAGGATTCAGCCTCCTTACAATTTAGGTTTTATTGTAGCCAATCAATTTTCACTATTTTTTGCACTGGAATGTGTACTCCTGATCTGTAAGTGTAAATGGTCGGGTATAGTGGATTCATTTCAATGAATTAGCTCATTCCCACTTCTCATGATTTGTTTGTATTGTTTGCTTGGAGAATTTAGTCGAGCAATGTATTCTTCCCCACCCTTTTCATATTGAAAA 3349 41.59 MAEGEFSDQNRLLRSMEDHNEEDLDLESQDGNGVHPLRNNSGKRGGFLDLLHHLNRGSSFSGRRLSYKRLDIDNHNVNFNPSSVNIVGRSRTASSSSSDRHNNFNSHSLHAPTAIDGEIDDNVDDTAPPEWALLLIACLLGLATGLCVAAFNIGVHVIHEWAWAGTPNEGAAWLRLQRIADTWHRILLIPVTGGVIVGMMHGLLEILSQIKQSSASQGQGFDLLSGVFPTVKAIQAAITLGTGCSLGPEGPSVDIGKSCANGFYLMMENNSEKIKIAFVAAGAAAGIASGFNAAVAGSFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSTVLLGTQSAFTVPAYDLKSAAELPLYLILGMLCGAVSVAVTRLVAWFGKSFEFIKERFGLPPVVCPALGGLGAGIIALKYPGILYWGFTNVEEILHTGNRPSAPGIWLLTQIAAAKVLATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAVEIINIAIPGNAAVAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVTKQTKEIESSDKRGLARGYTSLSPSEHKDGARWRYDNGDNDLELSEVVNPSGHESSYKDNLLEDLKVSQAMSKNCLKVSLSIYLKDALKYMKDNQQNCALVVDDDDFLEGILTHGDIKRYLFKKYGDAFMSDSLSVDTCLVSSIYTRGISYRGRERGILTCYPDTTLATAKELMEAKGIKQLPVVKRGKERKRRIVAVLHYDSIFSCLREVINQRETVYPSGKEIVAQETVADGH 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9666994 9687664 + XM_039049053.1 Bhi11g00403 49115

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00403 788 ProSiteProfiles CBS domain profile. 707 770 IPR000644 -
Bhi11g00403 788 CDD CBS_pair_voltage-gated_CLC_euk_bac 624 757 - -
Bhi11g00403 788 MobiDBLite consensus disorder prediction 21 40 - -
Bhi11g00403 788 ProSiteProfiles CBS domain profile. 624 682 IPR000644 -
Bhi11g00403 788 PANTHER CHLORIDE CHANNEL PROTEIN CLC-F 1 779 - -
Bhi11g00403 788 Gene3D Clc chloride channel 120 569 - -
Bhi11g00403 788 Pfam Voltage gated chloride channel 220 550 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00403 788 PRINTS Chloride channel signature 232 251 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00403 788 PRINTS Chloride channel signature 284 303 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00403 788 PRINTS Chloride channel signature 461 481 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00403 788 PRINTS Chloride channel signature 502 518 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00403 788 PRINTS Chloride channel signature 520 539 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00403 788 MobiDBLite consensus disorder prediction 88 107 - -
Bhi11g00403 788 CDD Voltage_gated_ClC 144 547 - -
Bhi11g00403 788 SUPERFAMILY Clc chloride channel 129 554 IPR014743 -
Bhi11g00403 788 Gene3D - 604 763 IPR046342 -
Bhi11g00403 788 SUPERFAMILY CBS-domain pair 614 761 IPR046342 -
Bhi11g00403 788 Pfam CBS domain 620 675 IPR000644 -
Bhi11g00403 788 Pfam CBS domain 710 759 IPR000644 -
Bhi11g00403 788 SMART cbs_1 710 762 IPR000644 -
Bhi11g00403 788 SMART cbs_1 627 675 IPR000644 -
Bhi11g00403 788 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 1 779 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00403 - - - csv:101212254 1407.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g01272 Bhi-Chr10:29663961 Bhi11g00403 Bhi-Chr11:9666994 1.17E-132 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g793 . . . . Bpe09g00096 . Bma10g00617 Bma13g01145 . . . . . . . . . . . . . . . . Cla10g00375 . . . . . . . . Cone14ag1276 Cone15ag1302 . . . . Blo07g00854 Blo10g00891 . Bda12g00991 . Bpe03g00734 . . Sed08g2869 . . . Cma16g00996 . Car16g00953 . . Bhi11g00403 Tan01g1903 Cmetu06g1959 . Hepe06g1241 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004422 1 1 2 4 2 1 2 1 1 1 3 1 2 1 1 2 1 2 2 1 1 0 1 1 2 1 0 3 1 1 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g00403 Bhi_Chr11 FPKM 9.511254 10.817989 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0