Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00404 GATTCCATCCATTCCATTCCCTGTCGTCCAAACACAATCCCCTTTCTCCCCTTTTCCTCTTCAAAGGGTCCGACCATTTTTTTTGTTCTTTCTTTCTGGGTTAATTACAAACAGTGAAAGTTTTATCTTTTTGTTTGTAATTTTCTCTCAAAATACAATCATCTCACTTATGGCCATTGTTCATCAATTGGGTTTTGACCAGAATCACAAAAAACCAATTTGAGAAACGAGAATTTGGTGCTAAGGGGTGACTGTTCTTCAATGATCCCTAAACCTTGATTCTGCTTCTGGGATTTTCCCCCTGTTCAAACCCATTTCTTGTTCTTCTTCTTTGATTTGATTTCATTTTCCTACCTTCAAATCCACTCAGGATTCATCGTTCAAGCTCGGGATCGAGTAGAAATGGGGAGGACTGATGATAATGTTGCTATTATTGGAGATTGGGTTCCTCCAAGTCCCAGCCCAAGAACCTTTTTCTCAGCAATGCAAATGCTAGGGGAGGATATTAGTTCTAGACCTACCATGGATACTACCAGTAATGATCATAAAACTGAAAAAATCTTTCTCAGGCCTCGAGAACATACGGTATCAGAAAATGCCGCTGCAAGAGGCGGGGTCCCGGGTGCCAATTCTGGTGATCGAGCAACGGAGTTCGGTACGTTATCAGAGCAGAAATTCCGCGGGGGACTTGTGGAAAGGATTGCAGCCAGAGCTGGATTTAATGCTCCAAGATTGAATACAGAAAGCATTAGATCAACAGACCATTCTTTGAATTCAGAAGTAAAGTCCCCTTACTTGACAATACCACCTGGTCTCAGTCCAACTACATTGCTAGATTCTCCAGTTTTTCTTTCAAATTCACTGGCTCAGCAATCTCCCACAACTGGAAAGTTCCAATTTTTAGGAAATGTTTGTAGTAATCGGAGCTCGACGATTATGTCGGAGGCCAACAATAAAGGCAACAACAATCCTTTCGATGATAACAGTACATCATTTGCTTTCAGACCTAGTGTGGAATCTGGATCCTCCTTTTTTCTCAGTGCAGCAAGCAAAGTAATTTCACTTCCATCTCCCAAAAAAACAGCTTCTGCTACTATTCTTCCACAATCTTGTCCAAGAATTGAGGTTCCAGTTCCACGTTCAGAAAATTCTTTTCAATCTCATCTTGTAGAACCATCTCTGTCTTTACCCCAAAATCAAATCGGTCACCATCCTCAAGTGGGACTCTCTACATCATATGTGGAGAAGGATGATGGCGGTAAGACTGTGTTGGATGATCAAGGACCCTTTGATTCTCTATGTGGTGGTGGTGGTGGTGGTGGTGAACATTCTTCGCCACTCAACGAGCAACCAGATGAAGGGGAGCAAAGAGGCAGTGGGGATTCTATGGCTGGTGGTGGTTGTGGTGCTCCCTCGGAGGATGGATATAACTGGAGAAAATATGGACAAAAACAAGTTAAAGGAAGTGAGTATCCTCGGAGTTATTACAAGTGCACACATCCAAACTGTCAGGTCAAGAAGAAAGTCGAGCGATCTCACGAGGGCCATATAACAGAGATCATCTATAAAGGAGCACATAAACACCCAAAGCCCTCACCAAACCGACGAGCAGCAATCGGATCTTCTGATTCCCATATCAATATGCAACTAGACATCCAAGCACAAGCAGGCCATCAGAATGCTGAAGTTCCCCTTTGGGAAGATTCACAAAAAGGGATTCCAGGTGGAGCTCCTGATTGGATGCAAGAGAACCTTGAGGTGACTTCTTCAGCATCCTTGGGTCCTGAATATGGCAATCACCTTAACCCTTTACAGGCTCAAAATAACAGTCATATTGAAACAGTTGAGGCTATTGATGCCTCATCCACATTCTCTAATGATGAAGATGAAGATGATAGGGGGACACATGGCAGTATAACATTGGGATATGAGGGGGAAGGAGATGAATCTGAGTCTAAAAAAAGGAAACTCGATGCCTATGTAACAGAGATGAGCGGAGCCACTAGAGCTATCCGTGAGCCTAGAGTTGTAGTCCAGACTACCAGTGAAGTAGATATTCTGGACGACGGCTATCGTTGGCGCAAATATGGACAGAAGGTTGTGAAAGGAAATCCAAATCCTAGGAGTTACTACAAGTGCACGAATCCTGGCTGCACGGTGAGGAAGCATGTCGAGCGGGCATCACATGACCTGAAATCTGTGATAACCACATATGAAGGAAAACACAATCATGATGTTCCTGCCGCTCGCAACAGCAGCCACATTAGTTCTGGTACATCCAGTCCAGTAACAGGTCAAAACACGACCGCAGCAATGCAAACGCATGTTCATAGGTCAGGGCCACCCCAGACTCAAAACACTATTCCAAGATTTGAAAGGCCAGCCTTTGGCTTTTCTGGAAGACAGCAAATGGGCACTGCCCATGGCTTTGCTTTTGGAATGAACCAACCTGGACTGGGAAATCTGAACATGGCAGCAGTTGGCCAAGCCAAGCTTCCTGTTATGCCAATGCATCCTTACTTAGCACAAGCACACCATGTTAATGAAATGGGTTTCTTGTTGCCTAAAGGAGAGCCCAATGTAGAACCTACATCTGATCTTGGCCTGAACTTTAATGGTTCAACCGTGTATCAGCAAATTATGAGTAGGCTTCCACTTGGACCTGAGATATGATTGATCGGACGAAACGACATAATTCTAGTGGAAACAATTGGCACAATATTCACATAATCAGAATTCAAGAATTTCAACCAAAAGGATCCATAACTTGCAACTACAAA 2780 43.63 MGRTDDNVAIIGDWVPPSPSPRTFFSAMQMLGEDISSRPTMDTTSNDHKTEKIFLRPREHTVSENAAARGGVPGANSGDRATEFGTLSEQKFRGGLVERIAARAGFNAPRLNTESIRSTDHSLNSEVKSPYLTIPPGLSPTTLLDSPVFLSNSLAQQSPTTGKFQFLGNVCSNRSSTIMSEANNKGNNNPFDDNSTSFAFRPSVESGSSFFLSAASKVISLPSPKKTASATILPQSCPRIEVPVPRSENSFQSHLVEPSLSLPQNQIGHHPQVGLSTSYVEKDDGGKTVLDDQGPFDSLCGGGGGGGEHSSPLNEQPDEGEQRGSGDSMAGGGCGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHKHPKPSPNRRAAIGSSDSHINMQLDIQAQAGHQNAEVPLWEDSQKGIPGGAPDWMQENLEVTSSASLGPEYGNHLNPLQAQNNSHIETVEAIDASSTFSNDEDEDDRGTHGSITLGYEGEGDESESKKRKLDAYVTEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHISSGTSSPVTGQNTTAAMQTHVHRSGPPQTQNTIPRFERPAFGFSGRQQMGTAHGFAFGMNQPGLGNLNMAAVGQAKLPVMPMHPYLAQAHHVNEMGFLLPKGEPNVEPTSDLGLNFNGSTVYQQIMSRLPLGPEI 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9687859 9693949 - XM_039049054.1 Bhi11g00404 49116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00404 756 MobiDBLite consensus disorder prediction 276 343 - -
Bhi11g00404 756 MobiDBLite consensus disorder prediction 615 631 - -
Bhi11g00404 756 MobiDBLite consensus disorder prediction 609 631 - -
Bhi11g00404 756 SMART WRKY_cls 338 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 SMART WRKY_cls 553 612 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 MobiDBLite consensus disorder prediction 489 520 - -
Bhi11g00404 756 ProSiteProfiles WRKY domain profile. 339 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 SUPERFAMILY WRKY DNA-binding domain 545 613 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 SUPERFAMILY WRKY DNA-binding domain 337 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 105 709 IPR044810 GO:0003700
Bhi11g00404 756 Gene3D WRKY domain 334 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 ProSiteProfiles WRKY domain profile. 548 613 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 Pfam WRKY DNA -binding domain 339 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 Pfam WRKY DNA -binding domain 554 610 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00404 756 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 105 709 - -
Bhi11g00404 756 Gene3D WRKY domain 540 606 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g00009 Bhi-Chr10:503054 Bhi11g00404 Bhi-Chr11:9687859 3.01E-102 dispersed
Bhi10g00010 Bhi-Chr10:503081 Bhi11g00404 Bhi-Chr11:9687859 3.01E-102 dispersed
Bhi11g00404 Bhi-Chr11:9687859 Bhi11g00498 Bhi-Chr11:11821890 4.03E-08 dispersed
Bhi11g01759 Bhi-Chr11:49879293 Bhi11g00404 Bhi-Chr11:9687859 4.45E-15 dispersed
Bhi11g00404 Bhi-Chr11:9687859 Bhi11g00405 Bhi-Chr11:9687987 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2308 PF03106 WRKY 3.10E-24 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00404 K18835 - csv:101207853 1298.49