Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00405 TTCCATCCATTCCATTCCCTGTCGTCCAAACACAATCCCCTTTCTCCCCTTTTCCTCTTCAAAGGGTCCGACCATTTTTTTTGTTCTTTCTTTCTGGGTTAATTACAAACAGTGAAAGTTTTATCTTTTTGTTTGTAATTTTCTCTCAAAATACAATCATCTCACTTATGGCCATTGTTCATCAATTGGGTTTTGACCAGAATCACAAAAAACCAATTTGAGAAACGAGAATTTGGTGCTAAGGGGTGACTGTTCTTCAATGATCCCTAAACCTTGATTCTGCTTCTGGGATTTTCCCCCTGTTCAAACCCATTTCTTGTTCTTCTTCTTTGATTTGATTTCATTTTCCTACCTTCAAATCCACTCAGGATTCATCGTTCAAGCTCGGGATCGAGTAGAAATGGGGAGGACTGATGATAATGTTGCTATTATTGGAGATTGGGTTCCTCCAAGTCCCAGCCCAAGAACCTTTTTCTCAGCAATGCAAATGCTAGGGGAGGATATTAGTTCTAGACCTACCATGGATACTACCAGTAATGATCATAAAACTGAAAAAATCTTTCTCAGGCCTCGAGAACATACGGTATCAGAAAATGCCGCTGCAAGAGGCGGGGTCCCGGGTGCCAATTCTGGTGATCGAGCAACGGAGTTCGGTACGTTATCAGAGCAGAAATTCCGCGGGGGACTTGTGGAAAGGATTGCAGCCAGAGCTGGATTTAATGCTCCAAGATTGAATACAGAAAGCATTAGATCAACAGACCATTCTTTGAATTCAGAAGTAAAGTCCCCTTACTTGACAATACCACCTGGTCTCAGTCCAACTACATTGCTAGATTCTCCAGTTTTTCTTTCAAATTCACTGGCTCAGCAATCTCCCACAACTGGAAAGTTCCAATTTTTAGGAAATGTTTGTAGTAATCGGAGCTCGACGATTATGTCGGAGGCCAACAATAAAGGCAACAACAATCCTTTCGATGATAACAGTACATCATTTGCTTTCAGACCTAGTGTGGAATCTGGATCCTCCTTTTTTCTCAGTGCAGCAAGCAAAACAGCTTCTGCTACTATTCTTCCACAATCTTGTCCAAGAATTGAGGTTCCAGTTCCACGTTCAGAAAATTCTTTTCAATCTCATCTTGTAGAACCATCTCTGTCTTTACCCCAAAATCAAATCGGTCACCATCCTCAAGTGGGACTCTCTACATCATATGTGGAGAAGGATGATGGCGGTAAGACTGTGTTGGATGATCAAGGACCCTTTGATTCTCTATGTGGTGGTGGTGGTGGTGGTGGTGAACATTCTTCGCCACTCAACGAGCAACCAGATGAAGGGGAGCAAAGAGGCAGTGGGGATTCTATGGCTGGTGGTGGTTGTGGTGCTCCCTCGGAGGATGGATATAACTGGAGAAAATATGGACAAAAACAAGTTAAAGGAAGTGAGTATCCTCGGAGTTATTACAAGTGCACACATCCAAACTGTCAGGTCAAGAAGAAAGTCGAGCGATCTCACGAGGGCCATATAACAGAGATCATCTATAAAGGAGCACATAAACACCCAAAGCCCTCACCAAACCGACGAGCAGCAATCGGATCTTCTGATTCCCATATCAATATGCAACTAGACATCCAAGCACAAGCAGGCCATCAGAATGCTGAAGTTCCCCTTTGGGAAGATTCACAAAAAGGGATTCCAGGTGGAGCTCCTGATTGGATGCAAGAGAACCTTGAGGTGACTTCTTCAGCATCCTTGGGTCCTGAATATGGCAATCACCTTAACCCTTTACAGGCTCAAAATAACAGTCATATTGAAACAGTTGAGGCTATTGATGCCTCATCCACATTCTCTAATGATGAAGATGAAGATGATAGGGGGACACATGGCAGTATAACATTGGGATATGAGGGGGAAGGAGATGAATCTGAGTCTAAAAAAAGGAAACTCGATGCCTATGTAACAGAGATGAGCGGAGCCACTAGAGCTATCCGTGAGCCTAGAGTTGTAGTCCAGACTACCAGTGAAGTAGATATTCTGGACGACGGCTATCGTTGGCGCAAATATGGACAGAAGGTTGTGAAAGGAAATCCAAATCCTAGGAGTTACTACAAGTGCACGAATCCTGGCTGCACGGTGAGGAAGCATGTCGAGCGGGCATCACATGACCTGAAATCTGTGATAACCACATATGAAGGAAAACACAATCATGATGTTCCTGCCGCTCGCAACAGCAGCCACATTAGTTCTGGTACATCCAGTCCAGTAACAGGTCAAAACACGACCGCAGCAATGCAAACGCATGTTCATAGGTCAGGGCCACCCCAGACTCAAAACACTATTCCAAGATTTGAAAGGCCAGCCTTTGGCTTTTCTGGAAGACAGCAAATGGGCACTGCCCATGGCTTTGCTTTTGGAATGAACCAACCTGGACTGGGAAATCTGAACATGGCAGCAGTTGGCCAAGCCAAGCTTCCTGTTATGCCAATGCATCCTTACTTAGCACAAGCACACCATGTTAATGAAATGGGTTTCTTGTTGCCTAAAGGAGAGCCCAATGTAGAACCTACATCTGATCTTGGCCTGAACTTTAATGGTTCAACCGTGTATCAGCAAATTATGAGTAGGCTTCCACTTGGACCTGAGATGTGAGTTGAGTTTATATTTTACCCTTTTTTCTCCCAATCTTTGTTCACTAGGAAAGTAAAAGTCCTTACTAGTACACATAGTCATAATATGAATATACATGTGACATTTCCATCAGTAAATCTCTAAAATTTCTCT 2776 43.48 MGRTDDNVAIIGDWVPPSPSPRTFFSAMQMLGEDISSRPTMDTTSNDHKTEKIFLRPREHTVSENAAARGGVPGANSGDRATEFGTLSEQKFRGGLVERIAARAGFNAPRLNTESIRSTDHSLNSEVKSPYLTIPPGLSPTTLLDSPVFLSNSLAQQSPTTGKFQFLGNVCSNRSSTIMSEANNKGNNNPFDDNSTSFAFRPSVESGSSFFLSAASKTASATILPQSCPRIEVPVPRSENSFQSHLVEPSLSLPQNQIGHHPQVGLSTSYVEKDDGGKTVLDDQGPFDSLCGGGGGGGEHSSPLNEQPDEGEQRGSGDSMAGGGCGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHKHPKPSPNRRAAIGSSDSHINMQLDIQAQAGHQNAEVPLWEDSQKGIPGGAPDWMQENLEVTSSASLGPEYGNHLNPLQAQNNSHIETVEAIDASSTFSNDEDEDDRGTHGSITLGYEGEGDESESKKRKLDAYVTEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHISSGTSSPVTGQNTTAAMQTHVHRSGPPQTQNTIPRFERPAFGFSGRQQMGTAHGFAFGMNQPGLGNLNMAAVGQAKLPVMPMHPYLAQAHHVNEMGFLLPKGEPNVEPTSDLGLNFNGSTVYQQIMSRLPLGPEM 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9687987 9693947 - XM_039049055.1 Bhi11g00405 49117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00405 747 MobiDBLite consensus disorder prediction 267 336 - -
Bhi11g00405 747 SUPERFAMILY WRKY DNA-binding domain 536 604 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 107 680 - -
Bhi11g00405 747 SUPERFAMILY WRKY DNA-binding domain 328 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 ProSiteProfiles WRKY domain profile. 539 604 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 Gene3D WRKY domain 325 389 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 107 680 IPR044810 GO:0003700
Bhi11g00405 747 MobiDBLite consensus disorder prediction 480 511 - -
Bhi11g00405 747 ProSiteProfiles WRKY domain profile. 330 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 Pfam WRKY DNA -binding domain 330 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 Pfam WRKY DNA -binding domain 545 601 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 MobiDBLite consensus disorder prediction 606 622 - -
Bhi11g00405 747 Gene3D WRKY domain 531 597 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 MobiDBLite consensus disorder prediction 600 622 - -
Bhi11g00405 747 SMART WRKY_cls 329 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00405 747 SMART WRKY_cls 544 603 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00405 Bhi-Chr11:9687987 Bhi11g00498 Bhi-Chr11:11821890 1.60E-15 dispersed
Bhi11g00404 Bhi-Chr11:9687859 Bhi11g00405 Bhi-Chr11:9687987 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2309 PF03106 WRKY 3.10E-24 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00405 K18835 - csv:101207853 1307.74