Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00468 AATGATTGAGATAAAACCAAAAAATTTCACATATTTCTTGCATCTACCTATAAAGTGAAGTGAGGCTCCAAGTTTCATACAATCCATGGAAGCTGTGATCGTGTGAAAGCAAGTCCACCCCATGATCTCTGAGCCTTTCTTCTGTAAATCTTGGAAAGGGGTAATTGGATCAATGATGTGGGTCATGATTGTCCATTATTAGGTGAAAAAGATGAAACTTTTTGGAAAAATCACAGCGAAGATCACGCGCCAGCATGGAAGACATTGTAGAGGATATTGGCTCTTCTTCGTTTCTTCTTTTCTTTCCCCACCTTCATGCGTGTCTGACTATTCTCTGATTCAAAATTTGTCTGAAACAAAAACAACCCATTTTCAATTGAAGCTCCTTCGACAAAGAATCCCTCGGTTCCTTTGGCCATTTTTTCTTCTCAAATCGATACTGCGTTTCACGTATTGTATCGTTTTGGGAATACCCTTTTGCGTTTTCTTGTGATACGATTGTTGGGTACTGGTTTTTTGGGTTTGAAATACCGAAGAAATCCCTTGTTTTCTTGACCCAGTGTTTTTTTGTTCGATCTTTTTGTGGGTTTGTGTTAAAAGGGTTTGTGGGTTTGATGGAGCTTCTTTGTTAATATGGTGGACGATTTGGTTGTTTGATTTTGTGATGAATAGCTGACTCTTCTTTTGGCGCTTTCGCGTGGTGTTTTGATCGTTTCTAGGGTTTCATATCTTCTTGGCTTTTTGGTGTTTTGTGTTTCTGGCTGAGTAATTTTGAGGTAGAATTTGCATAATACTTGGAAACTGAAAAGTAAAATGGGTGCGAAGGACCATCAAATTGCGACTCACTCACCTAATGCCAAAGTAGAAGTAGGAGAGATTGACACTAGTGCACCTTTCCAGTCTGTTAAAGACGCTGTTAACTTGTTTGGTGAAGGTGCTTTTTCGGGAGAACGAATGATTGTGAGGAAGGCGAAACAACCTCATTCTGCAGAGAAAGTGTTTGCAAAGGAGACTCAACTCCACTTGGCAGAAAAAGAACTGAGCAAATTAAAGGATCAGCTAAAGAATGCTGAAACTACCAAATCTGAAGCACTTGTTGAGCTTGAAAATACTAAAAGAGCTGTTGATGACCTGACCAAGAAGCTGCAATTGCTGAGGGAATCGAAAGAATCAGCCATCAAGGACTCAGAAGTTGCCAAGGCTCGAGCAAAGCAGTTTGAGGAGACAAATGGAAGCAATCATTCTGGAAATGATTGTGCTTGGAAACAAGACTTGGAAACTACCCGAGATCAGTACAATGTAGTGATCGGAGAACTAGATGCTGCAAAGCAAGAATTGAGGAAAATCCGTCAAGATTCTGATGCATCTTTGGAAGCAAAAGTAGCTGCATTGAAACAGGTGGCGGAGGCTGAGGAATCGGTCAAAACTCACAAGCTGAAAGCAAATGAACTTTCTGAGGAAATTTTGGCTGCACGGGAGTCCATTGAAAAGCTCAAGCTTGCATCCCTGCAAGCACATAAAGAGCAAGAAAAAATATTTGTGGAGAAAGACATCCAGAGGCAGTCTTATAAAGCGGCTCTTGAAGATTCGGCAAAAAAATTGTTTTCTTTGCAGAAGGAAATTGACCCTGATCTCACCCGGAATCTTGAATTGCAGTTGAGCGAGACGATGAATGAAATTGGGAAACTGCAGAAACAAATGGAAGATAAAAAGGCGTTGGATTTAGATTCAGTGAAGAATGTCACCTCAGAGCTTGATGATGCAAAAGAGTCCCTACAAAAAGTGGCTGAAGAGGAAAGAACTCTCCATAACCTGGTTGAAGCTCTGAAGTTGGAACTGGAAAATGTGAGGAAAGAGCATTCTGAACTCAAGGAGAAAGAAGCAGAGGCAGAATCTACTGCTGGGAATTTGCATGTCAAGCTCCGGAAGAGCAAATCTGAACTTGAAGCATACCTCACAGAAGAATCTAAAGCAAGAGGTGCTTGTGAAGAGATGCTCTCAACTCTTAACCAGCTGTCGTCAGAAACTGAAAATGCTAGACGGGGAGCAGAAGAAATGAATAATAAAGCAGAAGATTTGAGGAAGGAAGCAGAAGCCACCAGAATAGCATTGGAAGATGCTGAGAAGCAGCTGAGAGTTGCACTGGATGAAGCTGAAGAATCAAAAGCAGCGGAAGGTAGGGCCCTTGATCAGATTAAGGTACTGTCTGAGAGAACCAATGCTGCACGAGCTTCGACTTCAGAGTCAGGCGCTAACATCACCATCTCCAGGGAAGAGTTTGAGTCATTAAGCCGGAAAGTTGAGGAGTCTGACACATTAGCAGAAATGAAAGTAGCTGCTGCATTAGCTCAGGTTGAAGCTGTGAAGGCTAGTGAAAATGAAGTTCTAAAAAGGCTAGAAGCATCCCAGAAGGAAATTGAGGATATGAAGACTGCAACTGAGGAAGCTTCAAAGAAAGCCAATATGGCAGAAGCAGCTAAGAAAGCTGTGGAAGGAGAGCTACGGAGGTGGCGTGAGCGAGAGCAGAAAAAAGCGGTAGAAGCTGCATCAAGAATTTTGGCTGAAACAGAGGTGTCATTGGAATCATCTCCAACCCACAATAGGATTCAAAAGCAGAGCACAACAGTGAAAAGAGTTGAGTCCAAAAAATTGGAGAAAGATAAAACCTTCTCAAAGAAGGTGCTTTTACCGAACCTCAGCGGCTTATTTGTTAGGAAAAAGAACCAAGTCGAGGGTGGATCGCCCTCCTACCTGCCTGGTGAGAAGTCTACGTGATATTTCTTTTGCTTGACTTTCATGTTACTTTTAGTATTCAGGTGGGGGAACATATAATCATTGTGTGTACATTTTGTTGCCTGTAAATTTGTGCTCAGGTAACCAAAAATGACCTTGTAAGCAACATGGATGAGTGATTTTGTATATGGGCTGGTTTGTTAGATTATTGATCGAAGCATATTGTATTGAGATTTTCTATCTGCTAACGGAAATTTGTTTGCTAATCAAGGTATGATTGGATTACTGAGCTGAAAA 3030 41.49 MGAKDHQIATHSPNAKVEVGEIDTSAPFQSVKDAVNLFGEGAFSGERMIVRKAKQPHSAEKVFAKETQLHLAEKELSKLKDQLKNAETTKSEALVELENTKRAVDDLTKKLQLLRESKESAIKDSEVAKARAKQFEETNGSNHSGNDCAWKQDLETTRDQYNVVIGELDAAKQELRKIRQDSDASLEAKVAALKQVAEAEESVKTHKLKANELSEEILAARESIEKLKLASLQAHKEQEKIFVEKDIQRQSYKAALEDSAKKLFSLQKEIDPDLTRNLELQLSETMNEIGKLQKQMEDKKALDLDSVKNVTSELDDAKESLQKVAEEERTLHNLVEALKLELENVRKEHSELKEKEAEAESTAGNLHVKLRKSKSELEAYLTEESKARGACEEMLSTLNQLSSETENARRGAEEMNNKAEDLRKEAEATRIALEDAEKQLRVALDEAEESKAAEGRALDQIKVLSERTNAARASTSESGANITISREEFESLSRKVEESDTLAEMKVAAALAQVEAVKASENEVLKRLEASQKEIEDMKTATEEASKKANMAEAAKKAVEGELRRWREREQKKAVEAASRILAETEVSLESSPTHNRIQKQSTTVKRVESKKLEKDKTFSKKVLLPNLSGLFVRKKNQVEGGSPSYLPGEKST 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11100143 11103934 - XM_039047692.1 Bhi11g00468 49180

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00468 653 Coils Coil 196 230 - -
Bhi11g00468 653 PANTHER BNAC03G14000D PROTEIN 15 641 - -
Bhi11g00468 653 MobiDBLite consensus disorder prediction 400 423 - -
Bhi11g00468 653 Pfam Weak chloroplast movement under blue light 21 572 IPR008545 -
Bhi11g00468 653 Coils Coil 307 362 - -
Bhi11g00468 653 MobiDBLite consensus disorder prediction 587 607 - -
Bhi11g00468 653 Coils Coil 511 569 - -
Bhi11g00468 653 Coils Coil 398 453 - -
Bhi11g00468 653 Coils Coil 154 188 - -
Bhi11g00468 653 Coils Coil 275 302 - -
Bhi11g00468 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 15 641 - -
Bhi11g00468 653 Coils Coil 62 124 - -
Bhi11g00468 653 MobiDBLite consensus disorder prediction 407 423 - -
Bhi11g00468 653 MobiDBLite consensus disorder prediction 587 601 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00468 - - - csv:101202792 1134.01
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00288 Bhi-Chr2:5423018 Bhi11g00468 Bhi-Chr11:11100143 1.47E-07 dispersed
Bhi02g00289 Bhi-Chr2:5423018 Bhi11g00468 Bhi-Chr11:11100143 1.99E-07 dispersed
Bhi04g02474 Bhi-Chr4:67091658 Bhi11g00468 Bhi-Chr11:11100143 8.57E-42 dispersed
Bhi04g02475 Bhi-Chr4:67091658 Bhi11g00468 Bhi-Chr11:11100143 2.94E-40 dispersed
Bhi08g00676 Bhi-Chr8:23246995 Bhi11g00468 Bhi-Chr11:11100143 5.91E-135 dispersed
Bhi09g03333 Bhi-Chr9:85321058 Bhi11g00468 Bhi-Chr11:11100143 7.03E-33 dispersed
Bhi11g00468 Bhi-Chr11:11100143 Bhi03g02206 Bhi-Chr3:48193268 3.49E-10 dispersed
Bhi11g00468 Bhi-Chr11:11100143 Bhi09g03332 Bhi-Chr9:85321058 5.52E-33 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g687 . . . . Bpe09g00119 . . . . Cmo06g00678 . . . . . . . . . . . . . . . . . . . . . . . Cone14ag1256 Cone15ag1278 . Csa03g00417 . . . Blo10g00872 . Bda12g00972 . . . . . . . . . . . Cpe14g00781 . Bhi11g00468 . . . . . . . . . . . . . . . Chy06g01895 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005145 1 1 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 6 2 1 1 1 1 1 1 1 0 4 2 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g00468 Bhi_Chr11 FPKM 54.989899 57.647289 241.51152 247.969666 61.340107 43.495506 46.083477 31.816662 26.999273 34.017509