Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g00479 | TCTTATTTTCATTGTCACTCTCATCTTTTAGAGAGAGAATATAAAGAAGAAGAAGGGCAATTATGGAATGTGGAGGAACTGCACAAGGAGGAGGAGATGGCTTCCATAGCTATAAAAGGCAACATCCGAAACAAACTTCTGCATTGAACATGTTGCTGACCCCAAACAAGCCAACCTCCGCCAACAACACTCCAAACAGCAATCACCACCTCTCTAACGGTGGAGCCGCCACCGGCAACTCCCCAGCCACTAGCCCCATCCCGGTCGCTACCGCCACCAACAATGAGCAAAACCAACAATGCATGGTGCGAGAGCAAGACCAGTACATGCCGATAGCTAATGTGATACGCATCATGCGACGGATCTTACCCTCCCATGCAAAGATATCGGACGACGCCAAAGAGACCATCCAAGAATGTGTGTCAGAGTACATTAGCTTCATCACTGGCGAGGCAAACGAACGATGCCAACGGGAGCAACGCAAGACAGTGACGGCGGAGGATGTCCTTTGGGCTATGGGGAAGCTAGGTTTTGATGATTATATTGAACCGCTAACTGTTTTCCTCAACCGCTATCGTGAGTCGGAAAGTGACCGAATTCGCACTGAGCCAATCTTGAGGCGCAATGTGGATTACGGGCCACAAGTGGGAATGATGCCACCGTACGGGCAGGCATTTCAGATAGGGCATGTCCCAGCAGGGATGTTCGATGCAATGGGCGGATACTATAACGGAGGCGGGAGCGGTGGCCCGAGCGCCGGAAACGGTAGCCAGCTTTGATATGAGTTTGAAGTAGGGTACTAATTTGAAATGAAAGCTATATATATAATGAATAAATATCAAAAAGCAACAAGTGATTATAACCCATTTGTTCTAGCTAGGTTTGATGGTGGTGGTGGCTGGCTGGTTGGCTGCTGTGGTTTGTATGGCTGCAAGATAGTCTTTGCTAACTTCTCTCTTTCACTTTTTAAATTCTTGTTATTCCCCAAAAACTTTCTTGCATC | 1003 | 47.66 | MECGGTAQGGGDGFHSYKRQHPKQTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPIPVATATNNEQNQQCMVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYNGGGSGGPSAGNGSQL | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11348114 | 11352430 | + | XM_039049891.1 | Bhi11g00479 | 49191 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g00479 | 238 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 89 | 152 | IPR003958 | - | |
Bhi11g00479 | 238 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 56 | 205 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Bhi11g00479 | 238 | SUPERFAMILY | Histone-fold | 85 | 178 | IPR009072 | GO:0046982 | |
Bhi11g00479 | 238 | MobiDBLite | consensus disorder prediction | 32 | 69 | - | - | |
Bhi11g00479 | 238 | PRINTS | CCAAT-binding transcription factor subunit A signature | 116 | 134 | - | - | |
Bhi11g00479 | 238 | PRINTS | CCAAT-binding transcription factor subunit A signature | 135 | 153 | - | - | |
Bhi11g00479 | 238 | PRINTS | CCAAT-binding transcription factor subunit A signature | 154 | 172 | - | - | |
Bhi11g00479 | 238 | Gene3D | Histone, subunit A | 75 | 189 | IPR009072 | GO:0046982 | |
Bhi11g00479 | 238 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 | 56 | 205 | - | - | |
Bhi11g00479 | 238 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 119 | 135 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi11g00479 | Bhi-Chr11:11348114 | Bhi11g02147 | Bhi-Chr11:60104399 | 1.22E-46 | dispersed | |
Bhi11g00479 | Bhi-Chr11:11348114 | Bhi11g02146 | Bhi-Chr11:60103939 | 1.81E-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2312 | PF00808 | CBFD_NFYB_HMF | 3.00E-25 | CL0012 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g00479 | K08065 | - | csv:116402762 | 384.03 |