Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00479 TCTTATTTTCATTGTCACTCTCATCTTTTAGAGAGAGAATATAAAGAAGAAGAAGGGCAATTATGGAATGTGGAGGAACTGCACAAGGAGGAGGAGATGGCTTCCATAGCTATAAAAGGCAACATCCGAAACAAACTTCTGCATTGAACATGTTGCTGACCCCAAACAAGCCAACCTCCGCCAACAACACTCCAAACAGCAATCACCACCTCTCTAACGGTGGAGCCGCCACCGGCAACTCCCCAGCCACTAGCCCCATCCCGGTCGCTACCGCCACCAACAATGAGCAAAACCAACAATGCATGGTGCGAGAGCAAGACCAGTACATGCCGATAGCTAATGTGATACGCATCATGCGACGGATCTTACCCTCCCATGCAAAGATATCGGACGACGCCAAAGAGACCATCCAAGAATGTGTGTCAGAGTACATTAGCTTCATCACTGGCGAGGCAAACGAACGATGCCAACGGGAGCAACGCAAGACAGTGACGGCGGAGGATGTCCTTTGGGCTATGGGGAAGCTAGGTTTTGATGATTATATTGAACCGCTAACTGTTTTCCTCAACCGCTATCGTGAGTCGGAAAGTGACCGAATTCGCACTGAGCCAATCTTGAGGCGCAATGTGGATTACGGGCCACAAGTGGGAATGATGCCACCGTACGGGCAGGCATTTCAGATAGGGCATGTCCCAGCAGGGATGTTCGATGCAATGGGCGGATACTATAACGGAGGCGGGAGCGGTGGCCCGAGCGCCGGAAACGGTAGCCAGCTTTGATATGAGTTTGAAGTAGGGTACTAATTTGAAATGAAAGCTATATATATAATGAATAAATATCAAAAAGCAACAAGTGATTATAACCCATTTGTTCTAGCTAGGTTTGATGGTGGTGGTGGCTGGCTGGTTGGCTGCTGTGGTTTGTATGGCTGCAAGATAGTCTTTGCTAACTTCTCTCTTTCACTTTTTAAATTCTTGTTATTCCCCAAAAACTTTCTTGCATC 1003 47.66 MECGGTAQGGGDGFHSYKRQHPKQTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPIPVATATNNEQNQQCMVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYNGGGSGGPSAGNGSQL 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11348114 11352430 + XM_039049891.1 Bhi11g00479 49191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00479 238 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 89 152 IPR003958 -
Bhi11g00479 238 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 56 205 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bhi11g00479 238 SUPERFAMILY Histone-fold 85 178 IPR009072 GO:0046982
Bhi11g00479 238 MobiDBLite consensus disorder prediction 32 69 - -
Bhi11g00479 238 PRINTS CCAAT-binding transcription factor subunit A signature 116 134 - -
Bhi11g00479 238 PRINTS CCAAT-binding transcription factor subunit A signature 135 153 - -
Bhi11g00479 238 PRINTS CCAAT-binding transcription factor subunit A signature 154 172 - -
Bhi11g00479 238 Gene3D Histone, subunit A 75 189 IPR009072 GO:0046982
Bhi11g00479 238 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 56 205 - -
Bhi11g00479 238 ProSitePatterns NF-YB/HAP3 subunit signature. 119 135 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00479 Bhi-Chr11:11348114 Bhi11g02147 Bhi-Chr11:60104399 1.22E-46 dispersed
Bhi11g00479 Bhi-Chr11:11348114 Bhi11g02146 Bhi-Chr11:60103939 1.81E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2312 PF00808 CBFD_NFYB_HMF 3.00E-25 CL0012 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00479 K08065 - csv:116402762 384.03