Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00500 AATGAATCTGCTAAGAGATGTGTGTTGCTTTTGTTCAATATGCTACAATGGTATATAAAGGAGATAGATGTGGTGACGATTACAGATGGGCATGGACATAGACACTTGACAGATAATTATCTTTGATCACTTGGAGCTCATGGATCTATTTTAGGCTGTTATCTCTAATCAGTCCACGTTGCTTTGTGTTTGCTCTGTTGAGATCTAAGAATGTAGAGCCTTCTCCTACTACTGGGTCCCTTACCAAGCTTCCAATGGCACATGACTCTTCTAGCTCAGCTATTTATCCAATGACCACCATGGCTTTCTCAAATACTAATGCCTCAGATGAAGGAAGATCCAACTACTTTGAGTTCAAACCATATGTTGGACCAAATATGGTTCCTGCAGATTTGAGTCATAGGAAAGCTGAACAATCTTCTGAAGTTCAAGTTCAAGGTCAACCTCAACCATTTACTGCACCACCCATGACTAAAATCGAGATCAATGTCGTTTCAAATGATTTGAGTCGATCAACCCAGATGGATACACGTACAGTTGCCTCAGGGGCTAGTGTTCCTGAAGCCAACGGAGATGATATCAACCATAATTTGAACACAAATAGCAGGGTTCAGGCTCCACAATCTGATCCAAAAGGCAGTGCCATTCCAGTTGTTTCAGATAGGTTATCTGATGATGGATATAACTGGCGGAAGTATGGACAAAAGCATGTTAAAGGGAGTGAATTTCCGCGTAGCTATTATAAATGTACCCATCCTAACTGTGAAGTGAAAAAGCTTTTTGAACGCTCCCATGATGGGCAAATAACTGATATTATTTATAAGGGCACCCATGATCATCCTAAGCCTCAGCCAAGCCGGCGATATTCTGCCGGTACTTCTGTGAATGTTCAAGAAGATGGGCCTGATAAGCCTTCACCTTTATCTGGCCAAGATGACAGGTCATGCAGCATGTATGCTCAGTCAGTGCATACCATTGAGCAAAATGGAACTACCGAACCATCTCTGGCTGCAAATGATAGCAACACCGAAGGTGCAGGAACAACTCTGCCATGCAAGAATCATGATGAGGTTGATGACGATGACATATTCTTGAAGCGGAGGAAAATGGAACTTGGTGGTTTCGATGTCTGCCCAATGGTTAAACCAATCAGGGAACCACGTGTTGTGGTTCAAACTCTAAGTGAGGTTGATATACTGGATGACGGGTATCGCTGGCGCAAATATGGCCAGAAGGTAGTGAGAGGAAATCCCAACCCGAGGAGTTATTATAAGTGCACAAATGTTGGATGCCCTGTTAGAAAACATGTCGAAAGAGCATCCCATGACCCAAAAGCCGTTATAACTACGTATGAGGGGAAACATAATCACGACGTTCCCACTGCAAAGACTAGTAGCCATGATGTCGGAGGTCCATCGACAATTGCACCATTGAGGTATAGACTTGAGGAGAGTGACACCATAAGTCTTGATCTTGGTGTTGGCATTGGCATGGGTGGTGAGAATAGATCAAATGAATACAGGCAGGCATTGCATTCACAACTTGTTGAAAACCAAACTCCAAATGGCAATTTCAACTTCGAAGTAGTTCAAGAGAACTCGGGCCCGACCTATTTTGGTGTGATCAATAGAGGTATAAATCAGCATGGATCAAGAGAGAGTTTGAGTGAAAGCCGCAATAGGGAGATCACTCCACTAAATCATTCGTCCCACCCATATTCGACGAGCATCGGGAGAATACTAACAGGGCCTTAAGTTTCAGTGCAATGAAGCCATGAGAACAAGACGCCACCATTTTTCAACCCTATATTGCTTTCTTTTCATTTGGATGGCTTAGGATGAGGAGTGAATGTGGAAATATTAGAGTTCTTTTATGTTTGCCCTTTGTTGTTTGAGCTTATGCTGAGGTTAACTGCCTTAGTTCTAACTTCTCAGTCAATACATGTACAAATATAATATGAACCAACTGGTATTATTTGTTACACAGAAGATGTACCTTTACAATGTAATTCAAATACTGGAATATAAGTATTAATTAGCATA 2042 41.92 MAHDSSSSAIYPMTTMAFSNTNASDEGRSNYFEFKPYVGPNMVPADLSHRKAEQSSEVQVQGQPQPFTAPPMTKIEINVVSNDLSRSTQMDTRTVASGASVPEANGDDINHNLNTNSRVQAPQSDPKGSAIPVVSDRLSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITDIIYKGTHDHPKPQPSRRYSAGTSVNVQEDGPDKPSPLSGQDDRSCSMYAQSVHTIEQNGTTEPSLAANDSNTEGAGTTLPCKNHDEVDDDDIFLKRRKMELGGFDVCPMVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKTSSHDVGGPSTIAPLRYRLEESDTISLDLGVGIGMGGENRSNEYRQALHSQLVENQTPNGNFNFEVVQENSGPTYFGVINRGINQHGSRESLSESRNREITPLNHSSHPYSTSIGRILTGP 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11821890 11827042 - XM_039048146.1 Bhi11g00500 49212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00500 499 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 474 IPR044810 GO:0003700
Bhi11g00500 499 SUPERFAMILY WRKY DNA-binding domain 307 375 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 PANTHER WRKY TRANSCRIPTION FACTOR 20 ISOFORM X1-RELATED 19 474 - -
Bhi11g00500 499 Gene3D WRKY domain 132 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 MobiDBLite consensus disorder prediction 241 269 - -
Bhi11g00500 499 ProSiteProfiles WRKY domain profile. 310 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 MobiDBLite consensus disorder prediction 475 499 - -
Bhi11g00500 499 MobiDBLite consensus disorder prediction 241 264 - -
Bhi11g00500 499 MobiDBLite consensus disorder prediction 189 229 - -
Bhi11g00500 499 SUPERFAMILY WRKY DNA-binding domain 136 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 MobiDBLite consensus disorder prediction 115 141 - -
Bhi11g00500 499 MobiDBLite consensus disorder prediction 50 70 - -
Bhi11g00500 499 ProSiteProfiles WRKY domain profile. 134 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 SMART WRKY_cls 139 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 SMART WRKY_cls 315 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 Gene3D WRKY domain 302 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 MobiDBLite consensus disorder prediction 465 499 - -
Bhi11g00500 499 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 Pfam WRKY DNA -binding domain 316 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi11g00500 499 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00498 Bhi-Chr11:11821890 Bhi11g00500 Bhi-Chr11:11821890 0 dispersed
Bhi11g00499 Bhi-Chr11:11821890 Bhi11g00500 Bhi-Chr11:11821890 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2316 PF03106 WRKY 2.70E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00500 - - bhj:120090463 1025.39