Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi11g00534 | TTAATGGCTTTTCCCCCTTGCTTTTAAGGGTTTTAATGAAAATAAAGAATAATGGTGACAACGTCAACGAAGGGAATTTGACTTCCGCTCCGGCCATGGTCAATACGACGTTGATCCAATTCAACTCACCTTGGACTTCAATTCCTCCTCCCATAGGTTGATGGCACCTTCTGATTTATGGATAAAGGAATATAATGAAGCCTCTAAGCTTGGTGATGATATTAATGGCATGATTTCTGAAAGGAGTTCCTTTCCTGCAACTGGACCAGAATCCCAACGTCATGCTTCCGCCATTCGGAGGAAGATCACAATTTTGGGGACTAAAGTTGATGGCTTACAGTCCCTTTTGTTGAAACTTCCTGTAAAGCATCCCCTTTCTGAAAAGGAGATAAATCGACGTAAAGACATGCTTGCTCAGATGAGATCAAAAGTAAAGCAGATGGCCTCAACGTTGAACATGTCAAACTTTGCTAACCGGGACAGTTTGCTTGGTCCAGATATGAAATCGGCAGATGTAATGAGCAAGACAGCTGGACTAGACAATCAAGGACTTGTTGGTTTTCAAAGACAAATCATGAAGGAGCAAGATGAAGGTCTTGAAAAGCTGGAGGAGACTATTATAAGTACAAAACATATTGCATTAGCAGTTAACGAAGAACTCAATCTTCATACTTGCCTTATTGATGACTTGGACCAACATGTCGATGTTACAGACTCTCGATTAGCGAGGGTGCAGAAGAGATTGGGAATATTGAACAAGCAAACAAAAGGGAGCTGCACTTGCTTTGGAATGCTTCTGTCTGTGGTTGGTATTGTGGTTCTCATCGCTGTCATATGGCTGCTCATTCGATACTTGTAAACATTATATAAACATATGGGTATAAGATTTCTCACTTTATGATTAATATAAAATCCCACAATTGTTCAGTTATATTAGCTTGTA | 943 | 40.08 | MAPSDLWIKEYNEASKLGDDINGMISERSSFPATGPESQRHASAIRRKITILGTKVDGLQSLLLKLPVKHPLSEKEINRRKDMLAQMRSKVKQMASTLNMSNFANRDSLLGPDMKSADVMSKTAGLDNQGLVGFQRQIMKEQDEGLEKLEETIISTKHIALAVNEELNLHTCLIDDLDQHVDVTDSRLARVQKRLGILNKQTKGSCTCFGMLLSVVGIVVLIAVIWLLIRYL | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 12463500 | 12466896 | + | XM_039047224.1 | Bhi11g00534 | 49246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi11g00534 | 232 | CDD | SNARE_Qc | 139 | 195 | - | - | |
| Bhi11g00534 | 232 | SUPERFAMILY | t-snare proteins | 29 | 99 | IPR010989 | GO:0016020|GO:0016192 | |
| Bhi11g00534 | 232 | SUPERFAMILY | SNARE fusion complex | 127 | 198 | - | - | |
| Bhi11g00534 | 232 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 136 | 198 | IPR000727 | - | |
| Bhi11g00534 | 232 | PANTHER | SYNTAXIN | 1 | 227 | IPR045242 | - | |
| Bhi11g00534 | 232 | SMART | tSNARE_6 | 131 | 198 | IPR000727 | - | |
| Bhi11g00534 | 232 | Pfam | SNARE domain | 173 | 223 | IPR000727 | - | |
| Bhi11g00534 | 232 | Gene3D | - | 138 | 200 | - | - | |
| Bhi11g00534 | 232 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 227 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi09g01700 | Bhi-Chr9:45678401 | Bhi11g00534 | Bhi-Chr11:12463500 | 7.03E-132 | dispersed | |
| Bhi11g00534 | Bhi-Chr11:12463500 | Bhi11g00536 | Bhi-Chr11:12463671 | 1.79E-173 | dispersed | |
| Bhi11g00534 | Bhi-Chr11:12463500 | Bhi11g00535 | Bhi-Chr11:12463665 | 1.79E-173 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi11g00534 | K08503 | - | csv:101223140 | 412.149 |