Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00535 CTGTTCTTTTAGATTTTTGCTTCCTTTCGCCTTCGATTCTGCCTCGATTTTGGACGATCTGCCCTACATTGCATCGGATTATTGTTGGTTGTTGATGGCACCTTCTGATTTATGGATAAAGGAATATAATGAAGCCTCTAAGCTTGGTGATGATATTAATGGCATGATTTCTGAAAGGAGTTCCTTTCCTGCAACTGGACCAGAATCCCAACGTCATGCTTCCGCCATTCGGAGGAAGATCACAATTTTGGGGACTAAAGTTGATGGCTTACAGTCCCTTTTGTTGAAACTTCCTGTAAAGCATCCCCTTTCTGAAAAGGAGATAAATCGACGTAAAGACATGCTTGCTCAGATGAGATCAAAAGTAAAGCAGATGGCCTCAACGTTGAACATGTCAAACTTTGCTAACCGGGACAGTTTGCTTGGTCCAGATATGAAATCGGCAGATGTAATGAGCAAGACAGCTGGACTAGACAATCAAGGACTTGTTGGTTTTCAAAGACAAATCATGAAGGAGCAAGATGAAGGTCTTGAAAAGCTGGAGGAGACTATTATAAGTACAAAACATATTGCATTAGCAGTTAACGAAGAACTCAATCTTCATACTTGCCTTATTGATGACTTGGACCAACATGTCGATGTTACAGACTCTCGATTAGCGAGGGTGCAGAAGAGATTGGGAATATTGAACAAGCAAACAAAAGGGAGCTGCACTTGCTTTGGAATGCTTCTGTCTGTGGTTGGTATTGTGGTTCTCATCGCTGTCATATGGCTGCTCATTCGATACTTGTAAACATTATATAAACATATGGGTATAAGATTTCTCACTTTATGATTAATATAAAATCCCACAATTGTTCAGTTATATTAGCTTGTA 877 39.91 MAPSDLWIKEYNEASKLGDDINGMISERSSFPATGPESQRHASAIRRKITILGTKVDGLQSLLLKLPVKHPLSEKEINRRKDMLAQMRSKVKQMASTLNMSNFANRDSLLGPDMKSADVMSKTAGLDNQGLVGFQRQIMKEQDEGLEKLEETIISTKHIALAVNEELNLHTCLIDDLDQHVDVTDSRLARVQKRLGILNKQTKGSCTCFGMLLSVVGIVVLIAVIWLLIRYL 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 12463665 12466896 + XM_039047225.1 Bhi11g00535 49247
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00535 232 CDD SNARE_Qc 139 195 - -
Bhi11g00535 232 SUPERFAMILY t-snare proteins 29 99 IPR010989 GO:0016020|GO:0016192
Bhi11g00535 232 SUPERFAMILY SNARE fusion complex 127 198 - -
Bhi11g00535 232 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 198 IPR000727 -
Bhi11g00535 232 PANTHER SYNTAXIN 1 227 IPR045242 -
Bhi11g00535 232 SMART tSNARE_6 131 198 IPR000727 -
Bhi11g00535 232 Pfam SNARE domain 173 223 IPR000727 -
Bhi11g00535 232 Gene3D - 138 200 - -
Bhi11g00535 232 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 227 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00535 Bhi-Chr11:12463665 Bhi11g00537 Bhi-Chr11:12463729 1.79E-173 dispersed
Bhi11g00534 Bhi-Chr11:12463500 Bhi11g00535 Bhi-Chr11:12463665 1.79E-173 tandem
Bhi11g00535 Bhi-Chr11:12463665 Bhi11g00536 Bhi-Chr11:12463671 1.79E-173 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00535 K08503 - csv:101223140 412.149