Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00541 TTTTAGTTTCTTCAGCCCTAGACCCACGCTCAGACCCGCCTAAATCTCTCTGTTCTCTTTCACGTTATGCGAGCAGACCCACGCCGCCACTGCCGCTCAACCGCCCGCCGCCTCCGTCGCATGTCCGCCGGCCGCTTCTGCTCAGATTCCCTCGCTGCTCCGTCGGAAATTTTCTCCCTTGCCCAATCTATCTCTCTCTCTGAGTAGTTTGACAGCGTCGCCGCCGTGTCTGTATCAGCCGCCGCGATCAGACCTTCACCTCGCCGCCATCGTCGGATTTTGATTGAATTTGTGTCTTGGCAAGGTGGACCTAGGCGATTGATGTGGTTTTGCTGGAGCGAGGTCATGGGTGACTTAGAGGATTTTAGCTATTTTTGAAGTTTGAAAAGGTACGTGTTGCTCATACAACCATGTCTTGCCACAACCATGGCGATGAAGGTGATGTTGAGCTTCCTGCCAACAAGGAAGATGATGTGGTTGATGAGGACATGGAAGTCCTTCAGAGAGCCTATAGGCTTGTTGGAGTTAATCCAGAGGATTATATTAATCCTAGGCTGTCATCACCTGCCGTAGGAGATGCTAATTCTGGTTTTGATTCTGATGATGATGATTTCGAACTTCTTCGAAATATTCAGAACCGATTCTCGATTGTGGATGATGAGCAGCCGTTGAGTACTCTCCCACCAGTGTCCCTAGATGAGGAGGAAGATGAATTTGAGATGCTTCGTTCAATACAACGGCGCTTTGCGGCGTATGAAAGTGATGTTTTGAGCAATAAACCCAACGAGTCTCGTGACTATGTTGGGTCTCTAAAGATGGATTCTCACAACACAGCTGCTGAGAGCCAGACATCCTCAAAAAGGCCATCCATGGTAGCCTTTGAAAAGGGAAGCTTGCCAAAGGCTGCGTTGGCATTTGTTGATGCCATCAAGAAGAATAGGTCCCAGCAGAAGTTTATTCGTAGTAAGATGATTCATCTTGAAGCTAGAATTGAGGAGAACAAAAAGCTCAGAAAACGTTGTAAAATTCTCAAAGATTTCCAGGGTTCATGTAAACGAAAAACAACTTGTGCACTGTCTCAGATGATAGATCCTCGAGTCCAGTTAATTTCAGCTGCAAAACCACAAGCAAAGGATTCATCAAAGAAGGACAAACGTTTATCTGGAATGTATTATGGCCCAGCTGAGAATTCTCATGTTGCATGTTACAGAATGGCATTGGCGAAGTTTCCTCGTGTTGATCGAAAAAAATGGTCCATTGTAGAAAGGGAGAATCTAGGGAAGGGAATAAGACAGCAATTTCAGGAGATGGTGCTTCAGATTTCGGTGGACCAAATCAGTGGGCTACAAGGATTTTCTGCGGATTCGGATGATTTGGATAACATTCTTGCATCAATAAAAGACCTTGACATCACTCCTGAAAAGATAAGGGAATTTCTGCCAAAAGTTAATTGGGACAAATTGGCTTCCATGTATCTTCATGGTCGCTCAGGAGCAGAATGTGAAGCAAGGTGGTTGAATTTTGAAGACCCCCTAATTAATCGAGATCCATGGACTACAAGTGAGGATAAGAATCTTTTGTTTACTATCCAACAGAAGGGGTTGAATAACTGGATCGAGATAGCAGTTTCATCAGGTACAAACAGAACTCCTTTTCAGTGCTTGTCTCGGTATCAAAGGAGTTTAAACGCTTCCATATTAAAGAGGGAGTGGACCAAAGATGAGGATGATAAACTTCGATCTGCTGTTGCTATATTTGGCGTGAGAGATTGGCAGGCAGTAGCTTCTACTTTAGAAGGACGAGCTGGCACACAGTGCTCTAATAGGTGGAAAAAATCCCTTGACCCAGCTAGGACAAAAAGAGGTCATTTCACTCCAGATGAAGACAATCGCTTGAAAATTGCTGTTCTGCTCCTTGGGCCCAAAAATTGGAACAAGAAAGCAGAATTTTTACCTGGTCGAAATCAAGTTCAATGCAGAGAAAGATGGTTTAATTGTTTAGATCCTTCCTTGAGAAGATGTGAATGGACAGAAGAGGAGGATTTAAGGCTGGAGATAGCAATTCAGGAACATGGATATAGCTGGGCTAAGGTAGCTGCATGTGTACCATCACGTACAGATAATGACTGTCGGAGGAGATGGAAGAAGTTATTTCCCAATGAAGTTCCTTTGCTCCAGGAAGCTAGAAAGATTCAGAAGGCTGCCCTTATTAGCAACTTTGTCGATAGGGAATCAGAGCGTCCTGCTCTTGGTCCTGCTGACTTTCGACCCAGGCTAAATACAGATATATTATGTCATACTGATGATCCAAAACCTGCCCCAAAAAGAAATGCGAAGACGAGGAAGATGCCAGTGTCGAGGAATGAAAAGAGTGCTACTGGTGATGCTCCAAGGAAGAGGAAATCAAATTACCAGAGGAATCAGGCTGATGCAACCGCTCGGGTGGGTATTGCAAATAATACCTCTTCTGTCCCAGAGGAAGTTCAATCTTTAAAGCCTCCAAGAAAACGAAATAGGCATGAAGCTTGTACCGTGAAGAGAACAGGGGTTCTGGAGCTACATTCTAACAAGTGGTGTGCTAAACAGAATTTGAACACTCGGAGCGTTGGGGTGCAGCTGAGTAGTAAGGAATGTGAGATGACCAACAGTGACTTCACCGAGACTGTTGATGGGAATGGTCTGGAGGTATTTGAGAACAAAATTGCAGATAAGCTTTCTGAAAGAGATGTATTCTTTTCAGAACCAGAAGAAAATCAAAACTCAACTGGATCTTCTGGAGTCTCGGTACTGTCCGAAATGACTAACGACATGGATGAATATAATCCCTCCATCCTTCCAGATACAACATTGTTGGCTAGTACTACCGTGGATGATATCGAAGAATTGAAGGGGAAGAGTGGTGCAGACAGAGATCTGGATGACAGTAACAGTTTCTCGTTACCGCTCAGTTGCTTAGAACTTAGGACAATTGACGGTGAAGGTGTGGACAGTTATTCCGTGGACAAATCAACAGATAAAAGCCATGAGGTTTGCAAGCAACCCCAAGGCAGAAGGAAGAAAAATAGCAAAACATCACATAAAAACCACAATTATTCATTTCTTTCTTGTCAACAAGTGGAGCAGGAGAGGTTGGGGATGAATGAGCCTCGTCATCGTAATCAATCAAAGAAGAGAAAACATAGTAGTACAAATACGAGTTTGTTAGGAACATTGGAGGCAGTTGAGGAGGTTGATAACTGCACTCTAGTCGGCTTTTTGCAAAAAAGATTGAAGAAAGTTGATTGCAGTTCTGGTACTCCCTTAGAAGTTGATAACGATGACAATGATCGTATTGCCTCGTTTCTTAATAAATTGAAGAGAAAAAAACATCAGCCACCTAGTGATGGTTGAGTTAAATTAAGGTAGGATGACATGGTTTTGTTGCATTTTTGGGATATCTGAAGCAACATCACATTGAATCTCGGAAGAAGGTTGATGGAAGGCTGTACAAATAAAGCTTCCAAGGCTGAATGGCTAAATGCTCAACTATACGTTTGATTCTATGGTTGACAAATTTTTGTTTCGTGATTTAGCTAAGAGGGCTTTGGCAATTTTGTTTTGTTTTGGTTCATTTTCTTTTTCTAATTTGTTAATTTTTTTTTTTTTCTGAGAAGGTAGCATGATCTTCTCTTTGTACATTTATCTCACAATCTTAATGAAATTATTAAGGTATGAAGATTTTTTTTTGGTTGTGAA 3734 42.69 MSCHNHGDEGDVELPANKEDDVVDEDMEVLQRAYRLVGVNPEDYINPRLSSPAVGDANSGFDSDDDDFELLRNIQNRFSIVDDEQPLSTLPPVSLDEEEDEFEMLRSIQRRFAAYESDVLSNKPNESRDYVGSLKMDSHNTAAESQTSSKRPSMVAFEKGSLPKAALAFVDAIKKNRSQQKFIRSKMIHLEARIEENKKLRKRCKILKDFQGSCKRKTTCALSQMIDPRVQLISAAKPQAKDSSKKDKRLSGMYYGPAENSHVACYRMALAKFPRVDRKKWSIVERENLGKGIRQQFQEMVLQISVDQISGLQGFSADSDDLDNILASIKDLDITPEKIREFLPKVNWDKLASMYLHGRSGAECEARWLNFEDPLINRDPWTTSEDKNLLFTIQQKGLNNWIEIAVSSGTNRTPFQCLSRYQRSLNASILKREWTKDEDDKLRSAVAIFGVRDWQAVASTLEGRAGTQCSNRWKKSLDPARTKRGHFTPDEDNRLKIAVLLLGPKNWNKKAEFLPGRNQVQCRERWFNCLDPSLRRCEWTEEEDLRLEIAIQEHGYSWAKVAACVPSRTDNDCRRRWKKLFPNEVPLLQEARKIQKAALISNFVDRESERPALGPADFRPRLNTDILCHTDDPKPAPKRNAKTRKMPVSRNEKSATGDAPRKRKSNYQRNQADATARVGIANNTSSVPEEVQSLKPPRKRNRHEACTVKRTGVLELHSNKWCAKQNLNTRSVGVQLSSKECEMTNSDFTETVDGNGLEVFENKIADKLSERDVFFSEPEENQNSTGSSGVSVLSEMTNDMDEYNPSILPDTTLLASTTVDDIEELKGKSGADRDLDDSNSFSLPLSCLELRTIDGEGVDSYSVDKSTDKSHEVCKQPQGRRKKNSKTSHKNHNYSFLSCQQVEQERLGMNEPRHRNQSKKRKHSSTNTSLLGTLEAVEEVDNCTLVGFLQKRLKKVDCSSGTPLEVDNDDNDRIASFLNKLKRKKHQPPSDG 992
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12492758 12523613 - XM_039049791.1 Bhi11g00541 49253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00541 992 MobiDBLite consensus disorder prediction 669 691 - -
Bhi11g00541 992 CDD SANT 487 528 IPR001005 -
Bhi11g00541 992 Pfam Myb-like DNA-binding domain 537 580 IPR001005 -
Bhi11g00541 992 Pfam Myb-like DNA-binding domain 378 423 IPR001005 -
Bhi11g00541 992 Pfam Myb-like DNA-binding domain 431 475 IPR001005 -
Bhi11g00541 992 Pfam Myb-like DNA-binding domain 484 530 IPR001005 -
Bhi11g00541 992 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 17 929 - -
Bhi11g00541 992 MobiDBLite consensus disorder prediction 858 895 - -
Bhi11g00541 992 MobiDBLite consensus disorder prediction 1 23 - -
Bhi11g00541 992 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 483 530 IPR017930 -
Bhi11g00541 992 MobiDBLite consensus disorder prediction 625 703 - -
Bhi11g00541 992 SUPERFAMILY Homeodomain-like 370 426 IPR009057 -
Bhi11g00541 992 Gene3D - 538 584 - -
Bhi11g00541 992 ProSiteProfiles Myb-like domain profile. 426 477 IPR001005 -
Bhi11g00541 992 MobiDBLite consensus disorder prediction 625 668 - -
Bhi11g00541 992 MobiDBLite consensus disorder prediction 1 17 - -
Bhi11g00541 992 Gene3D - 481 535 - -
Bhi11g00541 992 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 426 481 IPR017930 -
Bhi11g00541 992 SMART sant 377 427 IPR001005 -
Bhi11g00541 992 SMART sant 535 583 IPR001005 -
Bhi11g00541 992 SMART sant 277 374 IPR001005 -
Bhi11g00541 992 SMART sant 483 532 IPR001005 -
Bhi11g00541 992 SMART sant 430 479 IPR001005 -
Bhi11g00541 992 ProSiteProfiles Myb-like domain profile. 479 530 IPR001005 -
Bhi11g00541 992 SUPERFAMILY Homeodomain-like 410 479 IPR009057 -
Bhi11g00541 992 Gene3D - 375 426 - -
Bhi11g00541 992 MobiDBLite consensus disorder prediction 861 879 - -
Bhi11g00541 992 ProSiteProfiles Myb-like domain profile. 373 425 IPR001005 -
Bhi11g00541 992 CDD SANT 538 581 IPR001005 -
Bhi11g00541 992 Gene3D - 430 480 - -
Bhi11g00541 992 SUPERFAMILY Homeodomain-like 481 577 IPR009057 -
Bhi11g00541 992 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 531 585 IPR017930 -
Bhi11g00541 992 CDD SANT 433 477 IPR001005 -
Bhi11g00541 992 ProSiteProfiles Myb-like domain profile. 531 581 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00539 Bhi-Chr11:12492758 Bhi11g00541 Bhi-Chr11:12492758 0 dispersed
Bhi11g00541 Bhi-Chr11:12492758 Bhi11g00546 Bhi-Chr11:12492758 0 dispersed
Bhi11g00540 Bhi-Chr11:12492758 Bhi11g00541 Bhi-Chr11:12492758 0 tandem
Bhi11g00541 Bhi-Chr11:12492758 Bhi11g00542 Bhi-Chr11:12492758 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2320 PF00249 Myb_DNA-binding 1.40E-09 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00541 K09422 - csv:101216287 1627.07