Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00543 ATTTTAGTTTCTTCAGCCCTAGACCCACGCTCAGACCCGCCTAAATCTCTCTGTTCTCTTTCACGTTATGCGAGCAGACCCACGCCGCCACTGCCGCTCAACCGCCCGCCGCCTCCGTCGCATGTCCGCCGGCCGCTTCTGCTCAGATTCCCTCGCTGCTCCGTCGGAAATTTTCTCCCTTGCCCAATCTATCTCTCTCTCTGAGTAGTTTGACAGCGTCGCCGCCGTGTCTGTATCAGCCGCCGCGATCAGACCTTCACCTCGCCGCCATCGTCGGATTTTGATTGAATTTGTTATCAACTATGTGTTGGGTGTAGTTTCGAAAACTTTAAGGGGATTTGAACACTGTCCGGCAAAGATTGTGGTAAACTGGTCAGTCGTTGGAGGTTGGATTTGAAGTTTTGAGGGGTTTAAAGCTGCTGTCCAGCAACGTTAAAGGTTGTTTTTGGCGGTTTAGCTTTTGGGTCTGATTTTGAAGTTTTGAAGTGGTTTCGGATCAAACCACTTATTGGGATTCAAGGTTGTGGTAACTAGGAGGGAGGTTGGTTTGCTTGGATAAGTATACATTTGGACTTATTTTTCGAGGTCTTGGCAAGGTGGACCTAGGCGATTGATGTGGTTTTGCTGGAGCGAGGTCATGGGTGACTTAGAGGATTTTAGCTATTTTTGAAGTTTGAAAAGGTTGGATTGTGGTTATGTAAATGGTTTTTGTAAGTGATGTTGAGGCAACCCCAAGTGTGTGCCTCAGGCAAGAAGCGAGGCGACCTGAGGTCTTCTCACCTCTGCGTACGTGTTGCTCATACAACCATGTCTTGCCACAACCATGGCGATGAAGGTGATGTTGAGCTTCCTGCCAACAAGGAAGATGATGTGGTTGATGAGGACATGGAAGTCCTTCAGAGAGCCTATAGGCTTGTTGGAGTTAATCCAGAGGATTATATTAATCCTAGGCTGTCATCACCTGCCGTAGGAGATGCTAATTCTGGTTTTGATTCTGATGATGATGATTTCGAACTTCTTCGAAATATTCAGAACCGATTCTCGATTGTGGATGATGAGCAGCCGTTGAGTACTCTCCCACCAGTGTCCCTAGATGAGGAGGAAGATGAATTTGAGATGCTTCGTTCAATACAACGGCGCTTTGCGGCGTATGAAAGTGATGTTTTGAGCAATAAACCCAACGAGTCTCGTGACTATGTTGGGTCTCTAAAGATGGATTCTCACAACACAGCTGCTGAGAGCCAGACATCCTCAAAAAGGCCATCCATGGTAGCCTTTGAAAAGGGAAGCTTGCCAAAGGCTGCGTTGGCATTTGTTGATGCCATCAAGAAGAATAGGTCCCAGCAGAAGTTTATTCGTAGTAAGATGATTCATCTTGAAGCTAGAATTGAGGAGAACAAAAAGCTCAGAAAACGTTGTAAAATTCTCAAAGATTTCCAGGGTTCATGTAAACGAAAAACAACTTGTGCACTGTCTCAGATGATAGATCCTCGAGTCCAGTTAATTTCAGCTGCAAAACCACAAGCAAAGGATTCATCAAAGAAGGACAAACGTTTATCTGGAATGTATTATGGCCCAGCTGAGAATTCTCATGTTGCATGTTACAGAATGGCATTGGCGAAGTTTCCTCGTGTTGATCGAAAAAAATGGTCCATTGTAGAAAGGGAGAATCTAGGGAAGGGAATAAGACAGCAATTTCAGGAGATGGTGCTTCAGATTTCGGTGGACCAAATCAGTGGGCTACAAGGATTTTCTGCGGATTCGGATGATTTGGATAACATTCTTGCATCAATAAAAGACCTTGACATCACTCCTGAAAAGATAAGGGAATTTCTGCCAAAAGTTAATTGGGACAAATTGGCTTCCATGTATCTTCATGGTCGCTCAGGAGCAGAATGTGAAGCAAGGTGGTTGAATTTTGAAGACCCCCTAATTAATCGAGATCCATGGACTACAAGTGAGGATAAGAATCTTTTGTTTACTATCCAACAGAAGGGGTTGAATAACTGGATCGAGATAGCAGTTTCATCAGGTACAAACAGAACTCCTTTTCAGTGCTTGTCTCGGTATCAAAGGAGTTTAAACGCTTCCATATTAAAGAGGGAGTGGACCAAAGATGAGGATGATAAACTTCGATCTGCTGTTGCTATATTTGGCGTGAGAGATTGGCAGGCAGTAGCTTCTACTTTAGAAGGACGAGCTGGCACACAGTGCTCTAATAGGTGGAAAAAATCCCTTGACCCAGCTAGGACAAAAAGAGGTCATTTCACTCCAGATGAAGACAATCGCTTGAAAATTGCTGTTCTGCTCCTTGGGCCCAAAAATTGGAACAAGAAAGCAGAATTTTTACCTGGTCGAAATCAAGTTCAATGCAGAGAAAGATGGTTTAATTGTTTAGATCCTTCCTTGAGAAGATGTGAATGGACAGAAGAGGAGGATTTAAGGCTGGAGATAGCAATTCAGGAACATGGATATAGCTGGGCTAAGGTAGCTGCATGTGTACCATCACGTACAGATAATGACTGTCGGAGGAGATGGAAGAAGTTATTTCCCAATGAAGTTCCTTTGCTCCAGGAAGCTAGAAAGATTCAGAAGGCTGCCCTTATTAGCAACTTTGTCGATAGGGAATCAGAGCGTCCTGCTCTTGGTCCTGCTGACTTTCGACCCAGGCTAAATACAGATATATTATGTCATACTGATGATCCAAAACCTGCCCCAAAAAGAAATGCGAAGACGAGGAAGATGCCAGTGTCGAGGAATGAAAAGAGTGCTACTGGTGATGCTCCAAGGAAGAGGAAATCAAATTACCAGAGGAATCAGGCTGATGCAACCGCTCGGGTGGGTATTGCAAATAATACCTCTTCTGTCCCAGAGGAAGTTCAATCTTTAAAGCCTCCAAGAAAACGAAATAGGCATGAAGCTTGTACCGTGAAGAGAACAGGGGTTCTGGAGCTACATTCTAACAAGTGGTGTGCTAAACAGAATTTGAACACTCGGAGCGTTGGGGTGCAGCTGAGTAGTAAGGAATGTGAGATGACCAACAGTGACTTCACCGAGACTGTTGATGGGAATGGTCTGGAGGTATTTGAGAACAAAATTGCAGATAAGCTTTCTGAAAGAGATGTATTCTTTTCAGAACCAGAAGAAAATCAAAACTCAACTGGATCTTCTGGAGTCTCGGTACTGTCCGAAATGACTAACGACATGGATGAATATAATCCCTCCATCCTTCCAGATACAACATTGTTGGCTAGTACTACCGTGGATGATATCGAAGAATTGAAGGGGAAGAGTGGTGCAGACAGAGATCTGGATGACAGTAACAGTTTCTCGTTACCGCTCAGTTGCTTAGAACTTAGGACAATTGACGGTGAAGGTGTGGACAGTTATTCCGTGGACAAATCAACAGATAAAAGCCATGAGGTTTGCAAGCAACCCCAAGGCAGAAGGAAGAAAAATAGCAAAACATCACATAAAAACCACAATTATTCATTTCTTTCTTGTCAACAAGTGGAGCAGGAGAGGTTGGGGATGAATGAGCCTCGTCATCGTAATCAATCAAAGAAGAGAAAACATAGTAGTACAAATACGAGTTTGTTAGGAACATTGGAGGCAGTTGAGGAGGTTGATAACTGCACTCTAGTCGGCTTTTTGCAAAAAAGATTGAAGAAAGTTGATTGCAGTTCTGGTACTCCCTTAGAAGTTGATAACGATGACAATGATCGTATTGCCTCGTTTCTTAATAAATTGAAGAGAAAAAAACATCAGCCACCTAGTGATGGTTGAGTTAAATTAAGGTAGGATGACATGGTTTTGTTGCATTTTTGGGATATCTGAAGCAACATCACATTGAATCTCGGAAGAAGGTTGATGGAAGGCTGTACAAATAAAGCTTCCAAGGCTGAATGGCTAAATGCTCAACTATACGTTTGATTCTATGGTTGACAAATTTTTGTTTCGTGATTTAGCTAAGAGGGCTTTGGCAATTTTGTTTTGTTTTGGTTCATTTTCTTTTTCTAATTTGTTAATTTTTTTTTTTTTCTGAGAAGGTAGCATGATCTTCTCTTTGTACATTTATCTCACAATCTTAATGAAATTATTAAGGTATGAAGATTTTTTTTTGGTTGTGAA 4131 42.73 MLRQPQVCASGKKRGDLRSSHLCVRVAHTTMSCHNHGDEGDVELPANKEDDVVDEDMEVLQRAYRLVGVNPEDYINPRLSSPAVGDANSGFDSDDDDFELLRNIQNRFSIVDDEQPLSTLPPVSLDEEEDEFEMLRSIQRRFAAYESDVLSNKPNESRDYVGSLKMDSHNTAAESQTSSKRPSMVAFEKGSLPKAALAFVDAIKKNRSQQKFIRSKMIHLEARIEENKKLRKRCKILKDFQGSCKRKTTCALSQMIDPRVQLISAAKPQAKDSSKKDKRLSGMYYGPAENSHVACYRMALAKFPRVDRKKWSIVERENLGKGIRQQFQEMVLQISVDQISGLQGFSADSDDLDNILASIKDLDITPEKIREFLPKVNWDKLASMYLHGRSGAECEARWLNFEDPLINRDPWTTSEDKNLLFTIQQKGLNNWIEIAVSSGTNRTPFQCLSRYQRSLNASILKREWTKDEDDKLRSAVAIFGVRDWQAVASTLEGRAGTQCSNRWKKSLDPARTKRGHFTPDEDNRLKIAVLLLGPKNWNKKAEFLPGRNQVQCRERWFNCLDPSLRRCEWTEEEDLRLEIAIQEHGYSWAKVAACVPSRTDNDCRRRWKKLFPNEVPLLQEARKIQKAALISNFVDRESERPALGPADFRPRLNTDILCHTDDPKPAPKRNAKTRKMPVSRNEKSATGDAPRKRKSNYQRNQADATARVGIANNTSSVPEEVQSLKPPRKRNRHEACTVKRTGVLELHSNKWCAKQNLNTRSVGVQLSSKECEMTNSDFTETVDGNGLEVFENKIADKLSERDVFFSEPEENQNSTGSSGVSVLSEMTNDMDEYNPSILPDTTLLASTTVDDIEELKGKSGADRDLDDSNSFSLPLSCLELRTIDGEGVDSYSVDKSTDKSHEVCKQPQGRRKKNSKTSHKNHNYSFLSCQQVEQERLGMNEPRHRNQSKKRKHSSTNTSLLGTLEAVEEVDNCTLVGFLQKRLKKVDCSSGTPLEVDNDDNDRIASFLNKLKRKKHQPPSDG 1022
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12492758 12523614 - XM_039049785.1 Bhi11g00543 49255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00543 1022 MobiDBLite consensus disorder prediction 655 698 - -
Bhi11g00543 1022 Pfam Myb-like DNA-binding domain 408 453 IPR001005 -
Bhi11g00543 1022 Pfam Myb-like DNA-binding domain 461 505 IPR001005 -
Bhi11g00543 1022 Pfam Myb-like DNA-binding domain 514 560 IPR001005 -
Bhi11g00543 1022 Pfam Myb-like DNA-binding domain 567 610 IPR001005 -
Bhi11g00543 1022 CDD SANT 568 611 IPR001005 -
Bhi11g00543 1022 ProSiteProfiles Myb-like domain profile. 403 455 IPR001005 -
Bhi11g00543 1022 MobiDBLite consensus disorder prediction 888 924 - -
Bhi11g00543 1022 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 456 511 IPR017930 -
Bhi11g00543 1022 ProSiteProfiles Myb-like domain profile. 561 611 IPR001005 -
Bhi11g00543 1022 SUPERFAMILY Homeodomain-like 440 509 IPR009057 -
Bhi11g00543 1022 Gene3D - 405 456 - -
Bhi11g00543 1022 ProSiteProfiles Myb-like domain profile. 456 507 IPR001005 -
Bhi11g00543 1022 Gene3D - 511 565 - -
Bhi11g00543 1022 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 513 560 IPR017930 -
Bhi11g00543 1022 SMART sant 460 509 IPR001005 -
Bhi11g00543 1022 SMART sant 407 457 IPR001005 -
Bhi11g00543 1022 SMART sant 565 613 IPR001005 -
Bhi11g00543 1022 SMART sant 307 404 IPR001005 -
Bhi11g00543 1022 SMART sant 513 562 IPR001005 -
Bhi11g00543 1022 SUPERFAMILY Homeodomain-like 511 607 IPR009057 -
Bhi11g00543 1022 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 47 959 - -
Bhi11g00543 1022 MobiDBLite consensus disorder prediction 891 909 - -
Bhi11g00543 1022 CDD SANT 517 558 IPR001005 -
Bhi11g00543 1022 CDD SANT 463 507 IPR001005 -
Bhi11g00543 1022 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 561 615 IPR017930 -
Bhi11g00543 1022 SUPERFAMILY Homeodomain-like 400 456 IPR009057 -
Bhi11g00543 1022 MobiDBLite consensus disorder prediction 699 721 - -
Bhi11g00543 1022 Gene3D - 568 614 - -
Bhi11g00543 1022 MobiDBLite consensus disorder prediction 655 733 - -
Bhi11g00543 1022 ProSiteProfiles Myb-like domain profile. 509 560 IPR001005 -
Bhi11g00543 1022 Gene3D - 460 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00543 Bhi-Chr11:12492758 Bhi11g00545 Bhi-Chr11:12492758 0 dispersed
Bhi11g00542 Bhi-Chr11:12492758 Bhi11g00543 Bhi-Chr11:12492758 0 tandem
Bhi11g00543 Bhi-Chr11:12492758 Bhi11g00544 Bhi-Chr11:12492758 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2322 PF00249 Myb_DNA-binding 1.50E-09 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00543 K09422 - csv:101216287 1627.07