Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00585 AATAATTTAATTTTGGTGAAGAAGCTGAGAAGGTGGAGATGGTGGCATCCAGTTTTTCCTCTTCACGGACCTGACCTTTTCTCTCTCTCTCTCTTTCTCTCTCTCTTCCAAATCAAAAATTGAATTTGAATCTGCGATTTCTGCAAATCCCACTACCAAAAATCTGTCTCCAATTACCCTTGTGCATCAATTTCTTTCAATTTTGACGCTAAAATCGTTCTAGTTATGAGGAGAGGGAGAGGGGCGGCGGCGGCGGATGTGGCGGTTCCGGCGCCGCGTGAACCACCTACCACCGGATCGGAACGGAGATACAGAGGAGTTCGTAAAAGGCCATGGGGAAGATTCGCGGCGGAGATCAGAGATCCTTGGAAGAAAACAAGAGTTTGGTTAGGCACTTTCGATTCCGCCGAAGACGCCGCCCGTGCTTACGACAACGCCGCCATAACCCTCCGCGGCCCTAAAGCTAAAACCAATTTCCCTCTCCCTAATCCCACCTCGTTCTTCGATTACCCTCCTTTTCCTCCTCCTCCTCATCATCATCCCGTCAACGCTGCTCCAGATCCTTTCCCCGATCCCCGATTTCAGATTAGACCTACTTCTAGTAGTTTGAGCTCCACCGTTGAATCCTTCAGCGGCCCTCGCCCTCCCTCCACCGTTACCACCGCCGTTACTACAACTTCTCCTTCCCGTCGTTACCCACGCACTCCGCCGGTTCTACCTGAGGATTGCCATAGCGATTGCGATTCTTCCTCTTCCGTCGTTGACGACGGCGACGACATCGCTTCCTCCGCCGTCGTTCCTCGGAGACCTCCTCTGCCTTTCGATCTCAACATTCCACCTTCCGATCTTCTTGATTTTAGCGCCGATGATCTTCGATGTACCGCTTTGTGCCTCTGACCACCGGCGGCCGCCCACTGGTGGCGAAGATGATGATGATGCAATAATTCAATATTTTATTGTTGTTATTATTATTATTATTATTATTATTATTAATCTCCACTTTTTTTCCTTTTTTTTTCTTAATTTACTTCACTGTGCTGGCACGGCAGGCATAGGAAAAAGAGAAATTACCCGACAAGATTATGAAAAATCAAAAGCAATGATTTATCCACAGAACTATATATTCTTCTTTTTA 1135 47.49 MRRGRGAAAADVAVPAPREPPTTGSERRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPNPTSFFDYPPFPPPPHHHPVNAAPDPFPDPRFQIRPTSSSLSSTVESFSGPRPPSTVTTAVTTTSPSRRYPRTPPVLPEDCHSDCDSSSSVVDDGDDIASSAVVPRRPPLPFDLNIPPSDLLDFSADDLRCTALCL 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13309705 13310839 - XM_039047255.1 Bhi11g00585 49297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00585 223 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Bhi11g00585 223 CDD AP2 28 85 IPR001471 GO:0003700|GO:0006355
Bhi11g00585 223 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 201 - -
Bhi11g00585 223 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Bhi11g00585 223 MobiDBLite consensus disorder prediction 1 30 - -
Bhi11g00585 223 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Bhi11g00585 223 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Bhi11g00585 223 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Bhi11g00585 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 1 201 - -
Bhi11g00585 223 MobiDBLite consensus disorder prediction 128 195 - -
Bhi11g00585 223 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Bhi11g00585 223 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Bhi11g00585 223 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01437 Bhi-Chr1:29321053 Bhi11g00585 Bhi-Chr11:13309705 8.91E-24 dispersed
Bhi05g02092 Bhi-Chr5:63822404 Bhi11g00585 Bhi-Chr11:13309705 3.33E-40 dispersed
Bhi09g03458 Bhi-Chr9:87434055 Bhi11g00585 Bhi-Chr11:13309705 3.34E-28 dispersed
Bhi11g00585 Bhi-Chr11:13309705 Bhi03g01417 Bhi-Chr3:29582264 9.85E-27 dispersed
Bhi11g00585 Bhi-Chr11:13309705 Bhi10g01055 Bhi-Chr10:21193586 2.69E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2327 PF00847 AP2 5.30E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00585 K09286 - csv:101219993 284.263