Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00613 AAACTTATCTCTCAAAATTACTTCAAACATTTTATTCAACAATGGAATGCGCCAATTTCATGAGATGTTAATAGTGTAATTTAGGTAATTTTTACAACTCTCCCAAAATATGATATTTTGATTCTCCTGCCACTATGCTCAAATTCCAAACCCACAAAGCAAATTCACAATTCACATTTACAAACTTGCGAGACCTTTTTCTAAACATACTATTCGTGGCTAAAAAATAAAAAAGTCTTCATATTCATGCTCCCTTTCTAAACCCTAAACTAAATATTACTCCCTCTCATTCTCAAACTTGGAAGAGAAAACCCTTCAAAAATTTCTTCCCACCATGACCCACTCTCTCGAACCCAAATTCCACCAAACCCCATTTCCCCTTCTCCGCCGCAGCCCGAAATCTCCACGGCCCATTTCAATCCGATGCGGCGGCACCACCCGCGAGCTCCGATCCCGACTAGACTCCATCAAGAACACCCAGAAGCTCACCGAAGCCATGAAGCTCGTCGCCGCCGCTAAAGTTCGAAGAGCCCAAGAAGCCGTAATCAACAGCCGCCCCTTCTCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATTCAACGAGACGACATCGATTTCCCCTTTCTAAATCCCAGACCAATCAGAAAAGTCGCCGTCGTCGTCTTCACCGGCGACCGAGGTCTCTGCGGGGGCTTCAACGCTTCGGTAATAAAAAAAGCCGAGACCCGATTGGCCGAACTGAAAGATCTCGATCTGGGTCACACCCTAATTAGCATCGGGAAAAAGGGCAACTCGCATTTCCGCCGCCGGTCCGATGTAGAAGTCGATCGGTTCATCACCGGATGCGGCGGCGTACCCACAGTGAAAGATGCTCAAACCATTGCAGATATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTAGACAAAGTGGAAACAATTTACACAAAATTCGTTTCGTTGCTGAAATCTGAGCCTGTGATTGAGACATTGCTGCCATTGTTGGGCGAAGGGGAAGCCATGGGAGATGGAGGGTTTAGATTGACAACGGCGAAGGGGAAATTGACGGTGGAGAGAGAGGGGAAAAGGGGGGAAGTAGGGGAAATTTCGCCATTGTTGGAGTTTGAACAAGACCCAGTTCAGATTTTGGATGGGATGATGGCTTTGTATTTGAATAGCCAGATTTTAAGGTGTTTGCAGGAATCAATGGCGAGTGAAGTAGCGGCGAGGATGAATGCGATGAGTAATGCTTCTGAGAATGCAATGGAGTTGAAGAAATCTGTTTCGGTTGCTTATAATCGAGAGAGACAGGCCAAGATTACAGGCGAGATTTTGGAAATTGTTGCTGGCGCTGAAGCTCTTCAGGGATTTTGATTTCTTATTTTTTACCTTTTTTTCCCCCTTTTTGTGTAGCATCAGTGGTGGAAAATTTGATCGGCAAATTTGACATAGGCTTTTTTAAGATGTAGACAGTGAGTAGTTTGCCAAAAAAACACAAGGTCCTTTTTTAAAATTATATTTGTTTTCTTCCGCATTCGTTGGCACAATTTTCATCTTTTCCAATTA 1573 44.12 MTHSLEPKFHQTPFPLLRRSPKSPRPISIRCGGTTRELRSRLDSIKNTQKLTEAMKLVAAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQRDDIDFPFLNPRPIRKVAVVVFTGDRGLCGGFNASVIKKAETRLAELKDLDLGHTLISIGKKGNSHFRRRSDVEVDRFITGCGGVPTVKDAQTIADIVFSLFISEEVDKVETIYTKFVSLLKSEPVIETLLPLLGEGEAMGDGGFRLTTAKGKLTVEREGKRGEVGEISPLLEFEQDPVQILDGMMALYLNSQILRCLQESMASEVAARMNAMSNASENAMELKKSVSVAYNRERQAKITGEILEIVAGAEALQGF 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14325562 14327134 - XM_039049353.1 Bhi11g00613 49325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00613 348 CDD F1-ATPase_gamma 33 342 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 34 345 IPR035968 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 MobiDBLite consensus disorder prediction 1 25 - -
Bhi11g00613 348 ProSitePatterns ATP synthase gamma subunit signature. 331 344 IPR023632 -
Bhi11g00613 348 Gene3D ATP synthase, gamma subunit, helix hairpin domain 33 98 - -
Bhi11g00613 348 Gene3D ATP synthase, gamma subunit, helix hairpin domain 245 345 - -
Bhi11g00613 348 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 34 345 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 PRINTS ATP synthase gamma subunit signature 106 125 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 PRINTS ATP synthase gamma subunit signature 200 217 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 PRINTS ATP synthase gamma subunit signature 292 311 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 PRINTS ATP synthase gamma subunit signature 323 344 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 Hamap ATP synthase gamma chain [atpG]. 32 345 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 Gene3D - 99 226 - -
Bhi11g00613 348 PANTHER ATP SYNTHASE GAMMA CHAIN, CHLOROPLASTIC-LIKE 8 346 - -
Bhi11g00613 348 Pfam ATP synthase 35 345 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi11g00613 348 PANTHER ATP SYNTHASE GAMMA CHAIN 8 346 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01087 Bhi-Chr8:35078387 Bhi11g00613 Bhi-Chr11:14325562 1.37E-30 dispersed
Bhi11g00613 Bhi-Chr11:14325562 Bhi03g00577 Bhi-Chr3:11372082 8.00E-152 transposed
Bhi11g00613 Bhi-Chr11:14325562 Bhi08g01833 Bhi-Chr8:53279485 1.63E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00613 K02115 - csv:101214682 602.823