Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00614 CCCCTTAATTTTCACCATCAAAGGTTTGGTTCTGCATTTCTTTCCTCTTAGTTTGCTTCTTGAGAGAACAAATAAGAAGGAAGGGAAATCGAGGGATCTTAAAATTCAAAGCTTAAACCGAAAGAGAATACGATTTGAAGGCAAATCTACATTTGTTTTCTGCAACCTAACCTTCCAACGGAGGAGCGCATAATCTTTATCGACGTAGAAGAGGAGAAATTTTTGGGGTATGAATGCTCTGTAATTTCCGTCCAAACGGTGGTTGAAAGGAAGATAATGTCGAAACTTTTCGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGGAACAGATACTTCTTTGTCAAAGAAGAAATCGATGGTATAATGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGATGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACTGGTCAAGTTGCAGGTCCTGACTTGAAAAGCTTTATTCGACAGTTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGACTACAAGGGATAGCCTGAGGAACTCAAACGAAAAGGAGGCAGTTAAAGAGAAACCAATTCCAGATTCCCATTCTTTCACATTCAGGTCCTCTGAGCCCGTCGGGTCTGGCCAAACATTTAGACCAGGAACATGGCAGCCACCAACATGAATGCATGATTGCGCTTCAAAGAGGACTCACCTAAAGCTAGCAGTTCGTGACTTCTACGTCCAACAATTTGGTATGCTTCTGAGTTCCAATTACTTGCGTTCAAATTTTTCTGAGGACTTGCCCTTCTACTTGACCGTATCAGACAGATCCTGCCCTCCAAAGGTCTAAAACAGGGTTGTCACTCTGCATTGCCTTGGTTTTCAAATGGGCATATTTAGTATTGGTCTCATTAAAACAGTTATAATTTAAATTTTACGTAGCAATGTAAATAAGTATCCCTAGAGATTACTTGTGACTGTTTTGACCTCCCCCCATCCTATCGAGAGGCTGAGAAAAGTAACAAGCAATTATCGGAAGCGGCATTGCCGTGGAAGATTCACTGTGGGATAGATATCAATCCAGTTGGTTAAGATTTGATTTGTAAATTTTTTTATCCCAGATTTATAGGAATTCATTGTAATAATGTTCTCAAGCTCAGCTCGAGTGATTAATAATGTTGATGCATGTGATATTGTGTTGTGTC 1315 41.06 MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPDLKSFIRQFPTGSEGAQDVEGLTTRDSLRNSNEKEAVKEKPIPDSHSFTFRSSEPVGSGQTFRPGTWQPPT 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14354065 14358469 + XM_039047247.1 Bhi11g00614 49326

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00614 171 Coils Coil 57 77 - -
Bhi11g00614 171 MobiDBLite consensus disorder prediction 146 165 - -
Bhi11g00614 171 MobiDBLite consensus disorder prediction 127 145 - -
Bhi11g00614 171 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2 39 171 IPR007763 GO:0016020|GO:0032981
Bhi11g00614 171 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2 1 37 IPR007763 GO:0016020|GO:0032981
Bhi11g00614 171 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12 1 37 - -
Bhi11g00614 171 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12 39 171 - -
Bhi11g00614 171 MobiDBLite consensus disorder prediction 110 171 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00614 K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 - csv:101214441 290.426
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00614 Bhi-Chr11:14354065 Bhi11g00616 Bhi-Chr11:14354072 2.70E-111 dispersed
Bhi11g00614 Bhi-Chr11:14354065 Bhi11g00615 Bhi-Chr11:14354070 6.89E-121 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g519 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0056 Cone9ag0068 . . . . . . . . . . . . . . . . . . . . . . . Bhi11g00614 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007336 0 4 1 1 0 1 1 1 0 1 1 1 0 1 1 1 1 2 1 1 1 1 5 1 2 1 1 3 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi11g00614 Bhi_Chr11 FPKM 4.655102 3.759505 8.677859 8.097428 34.544357 37.195305 32.78759 9.957159 10.070282 9.900997