Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00654 CGTCAACTCTAACTGTGTGACGGAGGTGACGAATCTCTCATCCCGACGACTACCCGCCACCACTTCTTTCTCATATTCCCCAAATCCGATTCAGATTCTCCATTTTTTTCTTCTCTTCTCTCCATCAAAATTTCACCTTCAACTCTGTCACAGTCTCTCTCCGCTCTTTCGCTTTACCGCTTTCAATTCCAACAGAATTCACCCTGGAAACATCGCCCTTCCTGCTGAATCGCCATCCCCATCATCGCGATATGGTTTCCCCTGAAACCTCCAATTGGCTCTTTGATTATGCGTTAATGGATGATATTCCTGTCTCCGATGCCAATTTCTCTGCACCCACTACCGGTTTCTCCTGGTCTATCACTCCCCTCAACGGTTCCTCCAATGTCAGCACGGAAATTGAAGGATCATTGCTAGAATCAGATGGCATGAAGGAGCCTGGTTCAAAGAAGAGGGTCAGAACTGAATCAAGTTGTGCATCTAGCTCGAAAGCCTGTAGGGAGAAGCTGCGGAGGGACAGACTAAATGACAAGTTTCTGGAATTGGGCACTATTCTGGAGCCAGGAAGACCACCTAAGACCGACAAGGCTGCCATTTTGATCGATGCTGTTCGGATGGTCACTCAGTTACGTGGTGAAGCCCAGATGTTGAAGGACTCAAATACAAGTCTATCAGAGAAGATTAAAGAGTTGAAAGCTGAAAAGAATGAGCTTCGTGATGAGAAGCAGAGGTTAAAAATGGAGAAAGAGAAGTTGGAGCAACAACTAAAAGCCATGAATTCACAGCCTGGCTTCTTGCCTCCAGCAATCCCTGCGACTTTTGCTGCTCAAGGCCAAGCACCTGGAAACAAGTTGGTTCCTTTCATCGGCTACCCCGGAGTTGCCATGTGGCAGTTCATGCCACCTGCAGCAGTCGACACCTCGCAAGATCACGTACTCCGACCTCCTGTTGCTTAATTAGGCAGCCAGGCAACAGCGTGGACGGGGGTGGTTTGGGATTGCATATTTTGACCCAAACATTTGTGTACTAATTATACCATTGTTCTTGACACTTATTTCAGAACCTTGTTTAACTGGATGATTTGGTGGATATATCTTGACTGTATTTGCAACTTTTAGACTTTTTATGAAATCAGTGCTGGTTTTTACATGTAAAAATGTGAATAAGTTAATCCAGCATGTGAATGTTCATATGACTAGGCATAACAATATGATGTTTGCCTCCAATACTGCTAGAGAGACTGAATTTTCTTGACTGGCTAGTGAACTGTACATATCAATTGCAGCCAGTCAATGGGAATATTTTTTTCCCTTTTTTAATCATATCTGAAAAATCATCTGCTGCC 1345 44.46 MVSPETSNWLFDYALMDDIPVSDANFSAPTTGFSWSITPLNGSSNVSTEIEGSLLESDGMKEPGSKKRVRTESSCASSSKACREKLRRDRLNDKFLELGTILEPGRPPKTDKAAILIDAVRMVTQLRGEAQMLKDSNTSLSEKIKELKAEKNELRDEKQRLKMEKEKLEQQLKAMNSQPGFLPPAIPATFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15317417 15321432 + XM_039049859.1 Bhi11g00654 49366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00654 234 SMART finulus 81 132 IPR011598 GO:0046983
Bhi11g00654 234 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Bhi11g00654 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Bhi11g00654 234 CDD bHLH_AtILR3_like 83 155 - -
Bhi11g00654 234 MobiDBLite consensus disorder prediction 56 78 - -
Bhi11g00654 234 Gene3D - 78 154 IPR036638 GO:0046983
Bhi11g00654 234 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 234 - -
Bhi11g00654 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 151 IPR036638 GO:0046983
Bhi11g00654 234 Coils Coil 130 178 - -
Bhi11g00654 234 PANTHER BHLH TRANSCRIPTION FACTOR 1 234 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01745 Bhi-Chr8:50330385 Bhi11g00654 Bhi-Chr11:15317417 1.03E-83 dispersed
Bhi09g01946 Bhi-Chr9:54313939 Bhi11g00654 Bhi-Chr11:15317417 2.59E-121 dispersed
Bhi10g01477 Bhi-Chr10:35296201 Bhi11g00654 Bhi-Chr11:15317417 1.16E-93 dispersed
Bhi10g01891 Bhi-Chr10:47505098 Bhi11g00654 Bhi-Chr11:15317417 3.27E-19 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2328 PF00010 HLH 4.70E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00654 - - jre:108993453 372.859