Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00682 TTCATCCTTCAAATCCAAAATCCACCATTTTCTTCATGGCTTCACATAACAAAATCTTATTCTTTTCCATAACCCTTTTCTCAATTCTTTCAAATGTCTCTAGTAATTCCATTAACAAATGGTGCAAAACCACGCCGCATCCCAAAATTTGCATTTACTTCATGTCCCCAATCAAACCACCACCCCAAAACCGACCGGAGTTTCGAAAAATGGCTATTCGAACCGCTTTGCAAAAGGCCACCGAGGCTCAAACTTACGCAACGCGGTTCGGTCCGAGCTGTAAAACCACACGCCAGAGAGCCGCGTGGACTGACTGTTTGAAGCTCTACAACGACGTTGTTTTTCAATTAAACCGCACCCTCCAATGCGTCATTAGCGACGGAACGATCCGCCATCGCCGTTGTACGGATTTCGATGCGCAAACGTGGCTGAGCTCTGCTCTTACTGACATCGATTTATGCGTCTCTGGTGCGGCGGATCTCAATGTGACGGATTTTATAGCTCCAATCAAATGCCAGAATGTTTCGAAGATGATTAGTAATTGTTTGGCTGTTAATGGGAGGTTTTTGGAGGAAGAGGCTAAAAAGAGTGAAACTAAAATCGGTGTTGAAGATGATCGAGATGGGCCGTTTCCGATGTGGGTTTCGGATGGTGATCGGAAATTGTTGCAGTCGTCGGCGAGGGTGAGGGCTAACTTGGTGGTGGCGAAAGATGGGAGTGGGAAATTTCGGACGGTTCAGGCGGCGATCGATGCGGCGGCGAGGAGGCGTGGGAGGGGGCGATTTGTAATTTATGTAAAACGAGGGGTTTATAGAGAAAATATTGAAGTTGGGAATGATAATGGAAATTTAATGTTGGTGGGAGATGGGATGAGATTTACTGTGATTACAAGTGGAAGAAGTGTCGCCGCCGGCTTTACCACCTTCAGTTCTGCAACCGCTGGCATCCAAGGTCCAGGTTTCATGGCTCGAGGCATAAGGTTCGTGAACACAGCCGGTCCACGAATGGGCCAAGCTGTAGCACTACGATCGTCATCGGACCTGTCCGTGTTCCATCGATGCAGCTTCGAGGGCTACCAAGACACACTAATGGTGCTTTCACAAAGACAATTCTACAAGCAATGTTATGTTTACGGTACAATCGACTTCATTTTTGGGAACGCCGCAGTTGTTTTACAAAATTGCTTGATTTACGTAAGAAGACCCTTAAAAGGCCAAGTAAATGTCATAACTGCCCAAGGCCGTGAGGACCCATTTCAGAACAGCGGAATCTCAATCCACAACTCTCAAATACGAGCCGCCGCTGATTTGCGGCCCATGGTTGGCTCAGTCAAGACGTACTTGGGCCGGCCTTGGAAGAAGTATTCGCGGACCGTGATCATGAGAAGTTACATTGATAGCTTGGTTAGCCCTGCGGGGTGGTTGGCGTGGCAAAGTAGTAAATTTGCTCAAGCTACGTTGTATTATGGGGAGTATCGTAATATTGGGCCTAGGGCTTTCACACGGTATAGAGTTAGATGGCCTGGTTTTCATGTCATTAAAAGCCCAAATGTGGCCTCTAAGTTTACTGTTCAGAGACTTATTGCTGGCCAGACTTGGCTTCCGGCAACCGGAGTTCCCTTCAAGCTTGGCGTCTGATTTCCATTTCTTACATTTTTATGATGACCACTCTCCACGGCAGAATTTTCTATCACCATCTCATTATTATTTATTTAATAAAATATTTGGTTGTATTGGGAAGTGAATTGAAAAATGGAACCTACCATGCAAAAATTTTTAT 1779 45.92 MASHNKILFFSITLFSILSNVSSNSINKWCKTTPHPKICIYFMSPIKPPPQNRPEFRKMAIRTALQKATEAQTYATRFGPSCKTTRQRAAWTDCLKLYNDVVFQLNRTLQCVISDGTIRHRRCTDFDAQTWLSSALTDIDLCVSGAADLNVTDFIAPIKCQNVSKMISNCLAVNGRFLEEEAKKSETKIGVEDDRDGPFPMWVSDGDRKLLQSSARVRANLVVAKDGSGKFRTVQAAIDAAARRRGRGRFVIYVKRGVYRENIEVGNDNGNLMLVGDGMRFTVITSGRSVAAGFTTFSSATAGIQGPGFMARGIRFVNTAGPRMGQAVALRSSSDLSVFHRCSFEGYQDTLMVLSQRQFYKQCYVYGTIDFIFGNAAVVLQNCLIYVRRPLKGQVNVITAQGREDPFQNSGISIHNSQIRAAADLRPMVGSVKTYLGRPWKKYSRTVIMRSYIDSLVSPAGWLAWQSSKFAQATLYYGEYRNIGPRAFTRYRVRWPGFHVIKSPNVASKFTVQRLIAGQTWLPATGVPFKLGV 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 16994903 16998381 + XM_039049824.1 Bhi11g00682 49394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00682 533 SMART PMEI_2 21 173 IPR006501 GO:0004857
Bhi11g00682 533 ProSitePatterns Pectinesterase signature 2. 365 374 IPR033131 -
Bhi11g00682 533 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 59-RELATED 7 532 - -
Bhi11g00682 533 Pfam Pectinesterase 220 518 IPR000070 GO:0030599|GO:0042545
Bhi11g00682 533 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
Bhi11g00682 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 177 IPR035513 -
Bhi11g00682 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 177 IPR035513 -
Bhi11g00682 533 ProSitePatterns Pectinesterase signature 1. 246 265 IPR018040 -
Bhi11g00682 533 Pfam Plant invertase/pectin methylesterase inhibitor 25 172 IPR006501 GO:0004857
Bhi11g00682 533 PANTHER PECTINESTERASE 7 532 - -
Bhi11g00682 533 SUPERFAMILY Pectin lyase-like 216 531 IPR011050 -
Bhi11g00682 533 CDD PMEI-like_3 29 177 - -
Bhi11g00682 533 Gene3D - 214 533 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00682 Bhi-Chr11:16994903 Bhi12g00014 Bhi-Chr12:343394 0 dispersed
Bhi11g00682 Bhi-Chr11:16994903 Bhi12g00634 Bhi-Chr12:19483377 1.85E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00682 K01051 - csv:101213944 913.679