Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00747 TATTATGGTTGCTATGGTTTATTATGGGAATAATAATAATGGGTTTGTTTGTTGGGTTTTGTTTTGGTTCATTTTCATGGCAGTTGGTCTTGGTGAGTTCTTCGTCTATGGGGATAATAATGCTTGGTTTAATGCTCATGCAACTTTCTATGGAGTTGATCAAAACCCTACTAGTCTTGGAGGAGCATGTGGTTACGACAATACATTCCATGCGGGATTTGGAGTAAACACAGCGGCGGTGAGCGGCGTACTTTTCAGAGGTGGAGAGGCCTGCGGCGCTTGCTTTCTAGTAATTTGCGACTACAACGTCGACCCCAAGTGGTGTCTCCGCCGCCGTGCCGTCACTGTCACCGCCACAAACTTCTGCCCGTCCAATAACAACGGCGGCTGGTGCGACCCCCCTCGGTCCCATTTCGACATGTCGTCACCTGCTTTTCTTACCATTGCTCGTCAAGGCAACGAAGGCATTGTCCCTGTCCTTTACAAGAGGGTGAGTTGTAAAAGAAGAGGAGGGGTTCGATTCACGTTGAGAGGACAATCAAACTTCAACATGGTGATGATATCAAATGTTGGGGGTAGTGGCGATGTGAAAGTTGCATGGGTAAAAGGGTCGAGGACGAGGACGTGGATGCCCATGCATCGAAATTGGGGGGCGAATTGGCAAGCCAATGTCGACCTCCGAAATCAAAGAATGTCGTTTAAGCTCACTCTAGTTGATGGAACAACATTGGAGTTTGTCAATGTTGTTCCTTCCTCTTGGAGGTTCGGGCAAACATTTTCATCCATGATTCAATTCTCCTAAAGTGCTTTGT 812 47.17 MVAMVYYGNNNNGFVCWVLFWFIFMAVGLGEFFVYGDNNAWFNAHATFYGVDQNPTSLGGACGYDNTFHAGFGVNTAAVSGVLFRGGEACGACFLVICDYNVDPKWCLRRRAVTVTATNFCPSNNNGGWCDPPRSHFDMSSPAFLTIARQGNEGIVPVLYKRVSCKRRGGVRFTLRGQSNFNMVMISNVGGSGDVKVAWVKGSRTRTWMPMHRNWGANWQANVDLRNQRMSFKLTLVDGTTLEFVNVVPSSWRFGQTFSSMIQFS 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19584276 19587788 + XM_039050024.1 Bhi11g00747 49459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00747 265 SUPERFAMILY Barwin-like endoglucanases 18 188 IPR036908 -
Bhi11g00747 265 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 170 IPR007112 -
Bhi11g00747 265 PRINTS Expansin signature 71 85 IPR002963 GO:0009664
Bhi11g00747 265 PRINTS Expansin signature 100 111 IPR002963 GO:0009664
Bhi11g00747 265 PRINTS Expansin signature 113 123 IPR002963 GO:0009664
Bhi11g00747 265 PRINTS Expansin signature 127 144 IPR002963 GO:0009664
Bhi11g00747 265 PRINTS Expansin signature 169 181 IPR002963 GO:0009664
Bhi11g00747 265 PRINTS Expansin signature 181 202 IPR002963 GO:0009664
Bhi11g00747 265 PRINTS Expansin signature 217 238 IPR002963 GO:0009664
Bhi11g00747 265 PRINTS Expansin signature 246 262 IPR002963 GO:0009664
Bhi11g00747 265 Gene3D - 170 265 IPR036749 -
Bhi11g00747 265 Gene3D - 33 166 IPR036908 -
Bhi11g00747 265 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 180 260 IPR007117 -
Bhi11g00747 265 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Bhi11g00747 265 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Bhi11g00747 265 PRINTS Expansin/Lol pI family signature 80 98 IPR007118 GO:0005576
Bhi11g00747 265 PRINTS Expansin/Lol pI family signature 153 169 IPR007118 GO:0005576
Bhi11g00747 265 PRINTS Expansin/Lol pI family signature 208 222 IPR007118 GO:0005576
Bhi11g00747 265 PRINTS Expansin/Lol pI family signature 246 260 IPR007118 GO:0005576
Bhi11g00747 265 SUPERFAMILY PHL pollen allergen 167 260 IPR036749 -
Bhi11g00747 265 SMART dpbb_1 76 160 IPR007112 -
Bhi11g00747 265 PANTHER EXPANSIN-A12 19 265 - -
Bhi11g00747 265 Pfam Lytic transglycolase 76 160 IPR009009 -
Bhi11g00747 265 Pfam Expansin C-terminal domain 171 249 IPR007117 -
Bhi11g00747 265 PANTHER EXPANSIN-A15 19 265 IPR002963 GO:0009664
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00747 Bhi-Chr11:19584276 Bhi04g00118 Bhi-Chr4:3133777 2.98E-95 dispersed
Bhi11g00747 Bhi-Chr11:19584276 Bhi07g01546 Bhi-Chr7:44523309 2.89E-79 transposed
Bhi11g00747 Bhi-Chr11:19584276 Bhi06g00385 Bhi-Chr6:8321065 2.02E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00747 - - bhj:120091876 570.081