Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00798 TGATGGTTGAGCTGGCTTTTGCGACGTCAGGGGGATCCTGCGTCAAAGTTTCTATGCATTAATCTACACGCCACAAACTTCCTTCTTCTTCATTCTCTTTTTCTCTTTCCTTCTTCATTTCTCTCTCTCTCTCCCTCTCTCTCTGCAAAACCTTCTTCATACCCATTTCCATGTTCCTCCATTGGACCTCATAACAATAATCCCTTTCCATTCCCAATGTCTACAACAAAGCTTCTTCGCCATATCTCTGATCCAATCGATGAAAACCACAACTACGACCGCGAAATTGAGGCCTCTGAGAGGCTCGTTGGATCGCCGTTTACAGAGGATAGAGATTCTGTCTCTCTTACCCTAGGAGAGCCTCTCGTGCGTACCAGTACGGCCAGGATCAGTACCACCTCCCAGCTCGCCATTGTTGGTTCTAATATCTGTCCTATTGAGAGCCTCGACTACGAGATTATTGAGAATGAACTTTTCAAGCAGGATTGGAGGTCCAGAAAAAAGCTCGAGATATTTCAGTATATCATCCTCAAATGGGCGTTGTGCCTTTTAATAGGTTTAGTTACAGGGCTTGTTGGCTTCTTCAACAACATAGCTGTTGAGAATATTGCTGGTCACAAACTTCTCCTGACAAATAATCTCATGCTCAAGGAAAAGTACTTTCAGGCATTTGCAGTATACGTTGGTTGCAATAGTGCTTTAGCTGCTGCTGCTGCAATACTCTGTGCCTATATTGCGCCTGCTGCTGCAGGTTCTGGCATACCTGAGGTGAAAGCATACCTCAACGGTATAGATGCTTATTCTATATTGGCTCCAAGTACCTTATTTGTGAAGATTTTTGGTTCCATATTTGCTGTTGCTGGTGGATTTGTTGTGGGTAAGGAAGGACCCATGGTTCATACTGGTGCATGCATTGCCTCATTACTGGGACAAGGAGGCTCTCGCAAATATCGCTTGACTTGGAAGTGGCTCAGATACTTTAAAAATGATAGGGACAGGCGCGATTTGATCACTTGTGGTGCAGCAGCTGGTGTAGCAGCTGCCTTTCGGGCTCCAGTTGGTGGCGTTCTCTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGCGCTCTTCTCTGGAGGACCTTTTTCACGACTGCTGTAGTAGCTGTTGTCTTAAGGAGTTTCATTGAATTTTGCCGAGGGGGAAAATGTGGTTTGTTTGGTGAAGGAGGTCTCATAATGTTCAAAATCAATACAGAAAACTCCACTTATGGCACCCCAGATCTTATTGCAATTGTTTTACTTGGAGTTATTGGTGGTGTTTTTGGAAGCCTTTACAACTACCTCGTGGATAAGGTTCTCCGAACCTACAGCATCATAAATGAGAGAGGTCCCGGCACGAAACTTATCCTTGTTGTTGGGGTTTCCATATTGACAACCTGTGTCTCATTTGGTCTTCCTTGGTTCTCACAATGTTTACCGTGCCCAACTGACCTGGATGATCAATGCCCAACCGTTGGTCGCTCAGGAAACTACAAGAACTTCCAATGCCCACCTGGCCATTATAATGATCTTGCTTCTTTATTTTTCAATACCAACGATGATGCCATCCGAAGCCTGTTCACATCTGCTAATGACAAGCATTTTCAGCTCTCCTCACTTTTTGTCTTCTTTGTTTCTATCTATTGTCTTGGCATTATTACTTATGGCATTGCTGTGCCTTCTGGGCTCTTCATTCCTGTAATTCTGGCAGGGGCTTCTTATGGTCGCATTGTAGGGAGATTATTTGGTTCAGTTGCTACTCTTGATGTCAGTCTCTATGCCCTTCTCGGAGCTGCATCCTTCCTTGGTGGCACTATGAGAATGACTGTTTCTCTATGTGTCATACTCCTTGAGCTTACTAATAATCTTTTGATGCTCCCATTACTAATGTTGGTTCTTCTAATTTCAAAGTCAGTGGCAGATATTTTTAATAAAGGTGTCTATGATCAGATTGTGAAGATGAAAGGACTGCCTTTTATGGAAGCGCACGCAGAACCATTTATGAGGCAATTGGTTGCTGGTGGTGTGGCTTCTGGTCCCTTAATTACCTTTTCTGGGATTGAAAAGGTCGATAACATTGTCCACGCCTTGAAAATGACAAACCACAATGGGTTTCCTGTAATTGATGAACCACCTTTCTCAGATAGTTCAGAGCTTTGTGGGCTCGTTCTGAGGTCTCATCTGCTTGTTTTGCTTAAAGAAAAAAAATTTACTAAGAAAAAGGTGCCGCTTAGATCAGAAATTTTGAGTCGCTTCAAAGCACATGATTTTGCAAAAGCAGGTTCTGGCAAAGGGGTGAAACTGGAAGATTTGGAGTTCAACGAGGAGGAGATGGAAATGTTTGTTGATCTCCGTCCCATTACAAACACGTCACCCTACACAGTGGTAGAATCAATGTCACTAGCTAAAGCGGCGATTCTCTTTCATGCACTTGGCTTGAGGCACTTGTTGGTGGTTCCGAAGACACCCGGGAGGCCTCCTATTGCTGGAATTCTTACGCGTCACGACTTCATGCCAGAGCATATTCTGGGACTTTACCCACATCTCAACCCCCACAAGTAGAACAAAGCAAGGTTCTTTCCTTATTACTTTTCCTTCTGTTGAGTTCTTTTCGTGTGAGGATAGATTTGCTCCTTTCTCAGTGTCCATACCATTCTGTTGGAAATTTTGAAGCTCTATAGGAGAAAAATCTGTGATATGAGGTACACAAAACACACCTGCATAAACAGGAACTATTTACATTTTTACATGTCAATATCAGCTCATTCAATTATTATTTAATCTTTCCTTCCTTCGGTTGA 2825 43.36 MSTTKLLRHISDPIDENHNYDREIEASERLVGSPFTEDRDSVSLTLGEPLVRTSTARISTTSQLAIVGSNICPIESLDYEIIENELFKQDWRSRKKLEIFQYIILKWALCLLIGLVTGLVGFFNNIAVENIAGHKLLLTNNLMLKEKYFQAFAVYVGCNSALAAAAAILCAYIAPAAAGSGIPEVKAYLNGIDAYSILAPSTLFVKIFGSIFAVAGGFVVGKEGPMVHTGACIASLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSFIEFCRGGKCGLFGEGGLIMFKINTENSTYGTPDLIAIVLLGVIGGVFGSLYNYLVDKVLRTYSIINERGPGTKLILVVGVSILTTCVSFGLPWFSQCLPCPTDLDDQCPTVGRSGNYKNFQCPPGHYNDLASLFFNTNDDAIRSLFTSANDKHFQLSSLFVFFVSIYCLGIITYGIAVPSGLFIPVILAGASYGRIVGRLFGSVATLDVSLYALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLLMLVLLISKSVADIFNKGVYDQIVKMKGLPFMEAHAEPFMRQLVAGGVASGPLITFSGIEKVDNIVHALKMTNHNGFPVIDEPPFSDSSELCGLVLRSHLLVLLKEKKFTKKKVPLRSEILSRFKAHDFAKAGSGKGVKLEDLEFNEEEMEMFVDLRPITNTSPYTVVESMSLAKAAILFHALGLRHLLVVPKTPGRPPIAGILTRHDFMPEHILGLYPHLNPHK 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21796059 21803431 + XM_039048613.1 Bhi11g00798 49510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00798 789 CDD CBS_pair_voltage-gated_CLC_euk_bac 599 776 - -
Bhi11g00798 789 Pfam CBS domain 725 773 IPR000644 -
Bhi11g00798 789 CDD ClC_6_like 75 596 - -
Bhi11g00798 789 Gene3D Clc chloride channel 98 597 - -
Bhi11g00798 789 Pfam Voltage gated chloride channel 163 577 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00798 789 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 46 789 - -
Bhi11g00798 789 SUPERFAMILY Clc chloride channel 84 598 IPR014743 -
Bhi11g00798 789 Gene3D - 622 760 IPR046342 -
Bhi11g00798 789 PRINTS Chloride channel signature 175 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00798 789 PRINTS Chloride channel signature 206 225 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00798 789 PRINTS Chloride channel signature 270 289 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00798 789 PRINTS Chloride channel signature 495 515 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00798 789 PRINTS Chloride channel signature 527 543 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00798 789 PRINTS Chloride channel signature 545 564 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00798 789 PRINTS Chloride channel signature 583 597 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bhi11g00798 789 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 46 789 - -
Bhi11g00798 789 PRINTS Plant CLC chloride channel signature 80 88 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi11g00798 789 PRINTS Plant CLC chloride channel signature 291 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi11g00798 789 PRINTS Plant CLC chloride channel signature 305 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi11g00798 789 PRINTS Plant CLC chloride channel signature 323 330 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi11g00798 789 PRINTS Plant CLC chloride channel signature 447 463 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bhi11g00798 789 SUPERFAMILY CBS-domain pair 600 774 IPR046342 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02431 Bhi-Chr4:66260353 Bhi11g00798 Bhi-Chr11:21796059 0 dispersed
Bhi04g02432 Bhi-Chr4:66260353 Bhi11g00798 Bhi-Chr11:21796059 0 dispersed
Bhi06g01889 Bhi-Chr6:52860680 Bhi11g00798 Bhi-Chr11:21796059 0 dispersed
Bhi06g01890 Bhi-Chr6:52860680 Bhi11g00798 Bhi-Chr11:21796059 0 dispersed
Bhi11g00798 Bhi-Chr11:21796059 Bhi12g01730 Bhi-Chr12:55929850 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00798 K05016 - csv:101209987 1380.93