Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00871 AGATGTTGTTCTACTCTCACACTATTTCCCAACCAACGCCTCCTCTGAATCGCTCCGTTGCTAAGAGAGAAACGGAAATCGCCATTGAAATGCAGCTGCTTCTGCTTCTCTTTCTTCTTCTTCACCTCCATCTTCATCTCTCTCTTTCTTCTCACTTGCCTGAATATCGCGCTCTTCTCTCTCTCAAGAGCTCGTTTTCCGATGACTCCCAATCGCCGCTCTCCACTTGGGATGCTGCTACTACCCACTGTACTTGGGCCGGAGTCACCTGCGATTTCCGTCGCCACGTCGTTGGCCTCGACCTTGCAGGATTGAATCTCTCTGGTACTCTCTCTCCTGACCTGGGCTCTCTCCGGTTTCTCTCTAATCTTTCTTTCGCTTCCAATCAGATTTCCGGGCCCATTCCGCCGGAGATTTCTGCCATCTCTACACTTAAATATCTTAACCTCTCTAACAATCTCATTAATGGCACATTCCCCTTGCAACTCTCCATGCTCCATAATCTGGAGGTTCTTGATTTGTATAACAATAATATGTCTGGGAACTTGCCGCTTGTGGTCATCCAGTTGCCGAATCTCCGCCATTTGCATCTTGGGGGGAACTTCTTCTCCGGAGTGATTCCCCCGGGGTATGGAAGGTGGCAGTTCATGGAGTATTTGGCGGTGTCTGGAAATGAGCTTCAAGGTCCCATTCCGCCGGAGATTGGTAATCTGACGAAGCTTCGTGAACTTTACATTGGGTATTATAATACCTACGACGGCGGTTTGCCGCCGGAAATAGGAAACTTATCGGAACTTGTTCGATTGGATGCTGCTAACTGTGGGTTAACGGGTGAGATTCCTCGCGAACTTGGAAAACTTAAGAAATTGGATACTCTGTTTCTTCAGGTGAACGGCTTTTCTGGGCCTTTGATTCCGGAACTTGGGAGCTTAACGGGATTGAAATCCATGGATTTGTCTAACAACATTCTTGTTGGTGAGATTCCGGAATCATTCTCTCAACTGAAGAACTTGACGCTTTTGCATCTTTTCAGGAATAAGCTTCATGGAGCTATTCCACAGTTCATCGGCGAGTTGCCGGAGCTGGAAGTGTTGCAGTTGTGGGAAAATAACTTCACTGGCTCTATTCCTTACAGTTTGGGGAAGAATGGGAAGCTTGTTGTTCTAGACATTTCATCGAACAAGTTGACTGGAACTTTACCTCCCGATATGTGCCATGGAAATAGACTTCAAACTCTGATAACCCTCGGGAATTTCTTGTTTGGTCCAATCCCTGATTCTCTTGGTGGATGCCAGTCGTTGAGCCGTATTCGAATGGGGGAGAATTTTCTCAATGGTTCGATCCCAAACGGTCTCTTCGGTTTGCCAAATCTTTCCCAAGTTGAGTTGCAGAACAATTTTCTCACCGGAGAATTTCCAGTCACCGATTCCGTTTCTGCAAATCTCGGCCAAATTAGTCTGTCAAACAATCGGCTGTCGGGATCCCTTCCACCGATGGTTGGAAATTTCTCCGGCGTCCAGAAGCTTCTACTCGATGGGAACAAGTTCTCCGGCCAAATCCCACCTGAAATCGGGCGGTTACAGCAGCTCTCAAAGATTGATTTCAGCCACAACAAATTCTCTGGTCCAATCGCTCCGGAGATCAGCCAATGTAAGCTCTTAACCTTCGTCGATCTCAGTCGTAATGAACTCTCCGGTGAGATTCCGAATGAAATCACCACAATGAGGATATTGAACTATCTGAATCTCTCAAGAAATCACTTAATCGGAAGCGTTCCTGCTTCAATATCCTCAATGCAGAGCTTGACATCTGTTGATTTTTCATATAACAATCTCTCGGGTTTAGTTCCGGGCACCGGTCAGTTTAGCTACTTCAACTACACTTCATTTCTAGGCAACCCAGACCTCTGCGGTCCATACTTAGGACCTTGCAAAAATGGGGTCGGCAATGGCACTCAACAGCCTCATTTAAAAGCCTCATTCTCTTCTTCTGTGAAGCTTTTGCTTGTCATTGTCTTGCTAGTCTGCTCGATCGCATTTGCAATCGCAGCAATCATCAAAGCTCGGTCGCTAAAACGAGCAAGCGGGTCTCGAGCTTGGAAATTAACCGCATTCCAAAGACTAGATTTCACAGCAGATGACATTTTGGACTGTTTGAAAGAGGACAACATTATTGGGAAAGGAGGTGCTGGGATTGTTTACAAAGGTTTTATGCCGAGTGGCGATCATGTCGCTGTGAAAAGACTTCCGGCGATGGGCCGAGGATCGTCCCATGACCATGGATTCAATGCTGAGATACAGACTTTGGGGAGGATTAAACATCGTCACATTGTTAGATTATTGGGTTTCTGTTCAAACCATGAAACCAATCTTCTGGTTTATGAGTATATGCCTAATGGGAGTTTAGGGGAAGTTCTGCACGGGAAGAAAGGTGGGCATTTGCAATGGGACACAAGGTATAAGATCGCCATTGAAGCTGCTAAAGGTCTTTGCTATTTACATCATGACTGTTCGCCATTGATTGTTCACCGAGATGTAAAATCAAACAACATTCTTCTGGATTCTGATTATGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTTCAGGATTCAGGCACATCAGAATGTATGTCCGCCATAGCTGGTTCTTACGGATACATAGCTCCAGAATATGCTTATACATTGAGAGTGGATGAAAAGAGTGACGTTTATAGCTTTGGAGTAGTACTGTTAGAATTAGTGAGTGGGCGAAAGCCCGTCGGAGAATTCGGCGATGGGGTCGACATAGTTCAATGGGTCAGAAAAATGACGAGCCCCAACAATGAAGGGGTAGTGAAAATCATTGATCCACGCCTCTCCTCGGTCCCACTCAATGAAGTAACTCATGTATTCTATGTAGCGATGCTATGTGTGGAAGACCAAGCCGTGGAGAGGCCAACAATGAGAGAAGTAGTCCAAATCCTCACAGAACTACCAAGGCCACCAACTTCAAGACAAGTAGACTCAAAAGAAGCCGAAGTAACAACCCCACGGCTACTGCCATCATCCCCGGCTGTGGCATTAGATTCACCAAACAAAACACAGCCACCACCTGATCTTCTGAGCATTTGAAGTAGGAACCTTGGAGGGAGGGTTCATAGAAAAAGAGGAAGTCCTGATTTCTTGAGGCATTATAATTAGTGTTTGTGTGTTTTGGTTTGAATGGACTGGACTGACTTCAAGGAAAGCAATAGGAAAGTTTGTGTGTGTGTGTGTGTGTTTGTGTACAGTTTAGGGAGATGGGATTGGGATTGTTCTGCTGCTGAGACTGAGATGGGTGTCATCATCATTATAATTGATCAGTACACAGTAAGAGATGCAGGTTAGTGGTAATGGTACGTTCTGATTTTTACTGTGTGAAGGTCTGCTTATAAACTAAATGTTGCAGTGTTTTTTTTTTTTTTTCCTTTTCCTTTGTATAAGTTTTTATGATGAAGGGGAAACAGTGTCATTTCATGTCAAGGAACAAGATGCCTTCCTTCACAAACCAAACTATGGAGACATCATTTCAATCAA 3560 45.03 MLFYSHTISQPTPPLNRSVAKRETEIAIEMQLLLLLFLLLHLHLHLSLSSHLPEYRALLSLKSSFSDDSQSPLSTWDAATTHCTWAGVTCDFRRHVVGLDLAGLNLSGTLSPDLGSLRFLSNLSFASNQISGPIPPEISAISTLKYLNLSNNLINGTFPLQLSMLHNLEVLDLYNNNMSGNLPLVVIQLPNLRHLHLGGNFFSGVIPPGYGRWQFMEYLAVSGNELQGPIPPEIGNLTKLRELYIGYYNTYDGGLPPEIGNLSELVRLDAANCGLTGEIPRELGKLKKLDTLFLQVNGFSGPLIPELGSLTGLKSMDLSNNILVGEIPESFSQLKNLTLLHLFRNKLHGAIPQFIGELPELEVLQLWENNFTGSIPYSLGKNGKLVVLDISSNKLTGTLPPDMCHGNRLQTLITLGNFLFGPIPDSLGGCQSLSRIRMGENFLNGSIPNGLFGLPNLSQVELQNNFLTGEFPVTDSVSANLGQISLSNNRLSGSLPPMVGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGEIPNEITTMRILNYLNLSRNHLIGSVPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKNGVGNGTQQPHLKASFSSSVKLLLVIVLLVCSIAFAIAAIIKARSLKRASGSRAWKLTAFQRLDFTADDILDCLKEDNIIGKGGAGIVYKGFMPSGDHVAVKRLPAMGRGSSHDHGFNAEIQTLGRIKHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSDYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTSPNNEGVVKIIDPRLSSVPLNEVTHVFYVAMLCVEDQAVERPTMREVVQILTELPRPPTSRQVDSKEAEVTTPRLLPSSPAVALDSPNKTQPPPDLLSI 1037
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26623886 26627639 + XM_039049881.1 Bhi11g00871 49583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00871 1037 Gene3D Transferase(Phosphotransferase) domain 1 796 1010 - -
Bhi11g00871 1037 Gene3D Ribonuclease Inhibitor 382 647 IPR032675 -
Bhi11g00871 1037 Pfam Leucine rich repeat N-terminal domain 53 91 IPR013210 -
Bhi11g00871 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Bhi11g00871 1037 Pfam Leucine Rich Repeat 191 208 IPR001611 GO:0005515
Bhi11g00871 1037 Pfam Leucine Rich Repeat 313 334 IPR001611 GO:0005515
Bhi11g00871 1037 MobiDBLite consensus disorder prediction 995 1037 - -
Bhi11g00871 1037 SUPERFAMILY L domain-like 323 644 - -
Bhi11g00871 1037 ProSiteProfiles Protein kinase domain profile. 718 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g00871 1037 SUPERFAMILY Protein kinase-like (PK-like) 714 989 IPR011009 -
Bhi11g00871 1037 Gene3D Ribonuclease Inhibitor 48 112 IPR032675 -
Bhi11g00871 1037 Gene3D Ribonuclease Inhibitor 113 378 IPR032675 -
Bhi11g00871 1037 SUPERFAMILY RNI-like 99 420 - -
Bhi11g00871 1037 Pfam Protein tyrosine and serine/threonine kinase 720 989 IPR001245 GO:0004672|GO:0006468
Bhi11g00871 1037 SMART LRR_typ_2 383 406 IPR003591 -
Bhi11g00871 1037 SMART LRR_typ_2 189 213 IPR003591 -
Bhi11g00871 1037 SMART LRR_typ_2 598 621 IPR003591 -
Bhi11g00871 1037 SMART LRR_typ_2 526 550 IPR003591 -
Bhi11g00871 1037 SMART LRR_typ_2 358 382 IPR003591 -
Bhi11g00871 1037 SMART LRR_typ_2 310 334 IPR003591 -
Bhi11g00871 1037 MobiDBLite consensus disorder prediction 1021 1037 - -
Bhi11g00871 1037 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 32 1026 - -
Bhi11g00871 1037 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 32 1026 - -
Bhi11g00871 1037 SMART serkin_6 718 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi11g00871 1037 Gene3D Phosphorylase Kinase; domain 1 686 795 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01095 Bhi-Chr3:22261070 Bhi11g00871 Bhi-Chr11:26623886 0 dispersed
Bhi03g01096 Bhi-Chr3:22386873 Bhi11g00871 Bhi-Chr11:26623886 0 dispersed
Bhi03g02632 Bhi-Chr3:64691240 Bhi11g00871 Bhi-Chr11:26623886 1.37E-143 dispersed
Bhi05g00161 Bhi-Chr5:3301294 Bhi11g00871 Bhi-Chr11:26623886 0 dispersed
Bhi06g01858 Bhi-Chr6:52165017 Bhi11g00871 Bhi-Chr11:26623886 1.06E-166 dispersed
Bhi09g02075 Bhi-Chr9:59307520 Bhi11g00871 Bhi-Chr11:26623886 0 dispersed
Bhi11g00783 Bhi-Chr11:21296001 Bhi11g00871 Bhi-Chr11:26623886 0 dispersed
Bhi11g00871 Bhi-Chr11:26623886 Bhi08g02260 Bhi-Chr8:64514596 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88360 PF07714 PK_Tyr_Ser-Thr 1.40E-45 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00871 - - cic:CICLE_v10024796mg 1613.2