Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00875 CTTCAACCAAATTGTGAAGAAACCAAAAGAAAGGAAAAAAGTTACCTTCTTTTGGTTTTAAATTGAGTCCATTAAAGAGAGAATTAAAAACGCTCTTACTGTAGCTAACTGCTTGCCATAACAAAGTTTAATTTCTTAAAAATGAAGCTATGGGGTAATTTGGCCCTCTGGTTCACAGCCATGGCTGCCGTTTTCTTCTTGTTCTGTTTCGACCACAATGGCTACCGGAGTCCGATTCCGACCACCCCAATAAGGAGATACCTAAGGGACATGGACATCAACAATTCTTCGAGGCTTTTCAATGTCACACTACACAGACAAGGTGGATATGTTATAATGGACAATGGTATTGTCCAAGTTACTCTTTCAACTCCTGATGGCGACATCGTTGGATTAAGCTACAATGGAATCGACAACATTCTCGAAACCAAAAACGAAGAGCAAAACAGAGGCTACTGGGACGCCGTATGGAACAACCCAGACGAACCCATTTCCACCGACAGATTAAAAGGAGAGAGTTTTGAAATGATAATAGCGAACGAGGAGCAACTTGAAATATCGTTTAACAAAACTTGGAGTTTTGCAGTTGGGAACGAGACGGCACCTGTAAATGTGGACAAAAGGTACGTATTGCTGAGAGGAAGCTCTGGATTTTATAGTTATGCAATATTCGAGAGGCCCATTGGATGGCCCCAGATTGAAATGGATCAAGTTAGGATTGTTTACAAGCTTCAAAGCACAATGTTTGATTATATGGCTGTGTCGGACGATAGGCAAAGAGTGATGCCAACAATGGGAGACCGTGAAAATGGTGAGCCATTGGCTTATCCTGAGGCTGTTCTTTTGACTAATCCTGCCAATCAAGAACTCAGAGGAGAGGTGGATGACAAGTACCAGTACTCAACAGAGGACAAGGACAACCAAGTTCACGGCTGGATCTGCAGCGATCCGCCGGTGGGATTCTGGATGATCACTCCCAGCGACGAGTTCCGTGTCGCTGGTCCGGTCAAGCAGGATCTCACCTCTCACGCCGGCCCCATCACTCTCTCCATGTTCGTTAGCACCCACTACGCTGGAAAGGACATTGGTATGAGATTTGCAGCTGGAGAGCCCTGGAAGAAGGTCTTCGGCCCTGTCTTTGTCTATCTCAACTCTGTTTCCCCTGAAGAGGATTCTTTATCCCTGTGGCAAGATGCCAAACAACAGTTGGCAATAGAAATCAACGAGTGGCCCTACTCTTTTCCTCAATCAGAAGACTTCCCTTCTTCTGCCCAAAGAGGGAGCGTCGCAGGCCGATTATTAGTCTATGATGGGTATGTCAGTAGCCGACTTATGTGGGCGAGTAATGCTTTCGTTGGATTGGCATTGCCTGGTCCTGTGGGATCTTGGCAAATGGAAACCAAGGGCTATCAGTTCTGGACTCGAGCTGACAATCACGGCAACTTCTTAATCAATAACATCCGAGCTGGGGTTTACAGTCTGTACGCTTTTGTCCCTGGCTTCATTGGAGACTACAAATACGAGGCAAATATTACAATTGAGCTTGGGTCTGAAATCAGTTTGGAAGTGATGGTGTTTGATCCACCGAGACAAGGCCCAACCATTTGGGAGATTGGCATTCCCGACCGCACTGCAGCGGAGTTTTATGTGCCCGACCCTTATCCGACTCTCATGAATAAACTATACAACAACCATGCTGACAAGTTCAGACAATATGGTTTGTGGGAACGTTATGCGGCTATGTATCCAAATAATGATCTTGTGTTTACCGTTGGTGTCGATGATTATACAAAGGATTGGTTCTATGCTCATGTTAATAGGAATGTGGGAAATCAAACATACGAAGCGACCACTTGGGAGATCAGATTTTTATTGCAATCTGTGAATCAAACGGCAAATTACACACTGCAAATTGCATTAGCATCTGCTGCTGAATGCGAATTACAGGTTCGATTAAACGATCAAGAATCAGAGCAGGCTGCGTTCTCGACAGGGAAGATTGGAAAGGACAACGCGATCGCAAGGCATGGCATTCATGGACTTTACTGGTTATATTCCATACCTTTCCCTGGCGATCAATTTCTGCAATGGAACAACTCCATCTATCTCACTCAGGCAAGAAGCGAAAGCCCATTCGAAGGTCTCATGTATGACTACATTCGACTTGAAGCTCCACCTCTAACATGATCCAATCCTGAACAGTATTTTACAATTTTTTAATCGTTATATTTTCTGAGATTACAAATTATGTATAGCATCAAAGAAAAGTAATTAGCTGAAAAACCACAGGAATTTAGCAAATAGAAGTACAGGAATTAGTTTAGTTGGTAAATGTGGCCCCTTAGATTGTTCATGGGTTGCATTTATTGTCATGGTCGAGATATACCATTTTGTTAGCAACATATCGATGCTAAATATGTATACTGTTCCATCGGAAAGCTCTTTTGAGCTCTTAATCAAAGTTCCCTTTTTGT 2474 43.49 MKLWGNLALWFTAMAAVFFLFCFDHNGYRSPIPTTPIRRYLRDMDINNSSRLFNVTLHRQGGYVIMDNGIVQVTLSTPDGDIVGLSYNGIDNILETKNEEQNRGYWDAVWNNPDEPISTDRLKGESFEMIIANEEQLEISFNKTWSFAVGNETAPVNVDKRYVLLRGSSGFYSYAIFERPIGWPQIEMDQVRIVYKLQSTMFDYMAVSDDRQRVMPTMGDRENGEPLAYPEAVLLTNPANQELRGEVDDKYQYSTEDKDNQVHGWICSDPPVGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFVSTHYAGKDIGMRFAAGEPWKKVFGPVFVYLNSVSPEEDSLSLWQDAKQQLAIEINEWPYSFPQSEDFPSSAQRGSVAGRLLVYDGYVSSRLMWASNAFVGLALPGPVGSWQMETKGYQFWTRADNHGNFLINNIRAGVYSLYAFVPGFIGDYKYEANITIELGSEISLEVMVFDPPRQGPTIWEIGIPDRTAAEFYVPDPYPTLMNKLYNNHADKFRQYGLWERYAAMYPNNDLVFTVGVDDYTKDWFYAHVNRNVGNQTYEATTWEIRFLLQSVNQTANYTLQIALASAAECELQVRLNDQESEQAAFSTGKIGKDNAIARHGIHGLYWLYSIPFPGDQFLQWNNSIYLTQARSESPFEGLMYDYIRLEAPPLT 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26891371 26900868 + XM_039047720.1 Bhi11g00875 49587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00875 681 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 59 679 - -
Bhi11g00875 681 SUPERFAMILY Galactose-binding domain-like 485 676 IPR008979 -
Bhi11g00875 681 SUPERFAMILY Galactose mutarotase-like 66 340 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bhi11g00875 681 CDD RGL4_M 378 474 IPR029413 -
Bhi11g00875 681 Gene3D - 485 676 - -
Bhi11g00875 681 SUPERFAMILY Starch-binding domain-like 376 476 IPR013784 GO:0030246
Bhi11g00875 681 Gene3D - 53 343 IPR014718 GO:0030246
Bhi11g00875 681 CDD RGL4_N 57 345 - -
Bhi11g00875 681 CDD RGL4_C 489 676 - -
Bhi11g00875 681 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 59 679 - -
Bhi11g00875 681 Pfam Rhamnogalacturonate lyase family 53 247 IPR010325 -
Bhi11g00875 681 Pfam Polysaccharide lyase family 4, domain II 401 473 IPR029413 -
Bhi11g00875 681 Gene3D - 375 477 - -
Bhi11g00875 681 Pfam Polysaccharide lyase family 4, domain III 487 675 IPR029411 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01711 Bhi-Chr3:36050208 Bhi11g00875 Bhi-Chr11:26891371 0 dispersed
Bhi09g02522 Bhi-Chr9:68192017 Bhi11g00875 Bhi-Chr11:26891371 0 dispersed
Bhi09g02523 Bhi-Chr9:68203664 Bhi11g00875 Bhi-Chr11:26891371 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00875 K18195 - csv:101215252 1259.97