Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00878 AAGAGAAAAAAAAAGGAAAAAAAAAAAAGAAAAAAAAGAAAAAAAGAAAAAAAGAAAAAAACTAGGGCTTTCGTTTCCCCTTCTTCTTCTTCACAAATCTCTCCGTTTCTCACCCGATCTGGTTTCTCGCTCTCTCACTCGGAGATTTTCTGCGTTTCTCTGCCCTTCTTCTGTTCGTGCAGTGGCGCTTCTCTCTTCGTTCCGTTCGATTTGCATTTGGAACTCGTAACTGAAATGGCTGGGGGAGGAATGATCCGGCAGTTGCTGAGGAAATTTCCATCTCAATCTTCAACCCCTCCATTGACCTCATCCCTTATTTCAAAGAATCAGGAAGCTGGCTTTGCTGGGATGAACTCCTTTAGAAGGCTGGCTCTCCTTGGAGCAGGCATTTCAGGGTTTTTCAGTTTTGCAACTTTGGCATCTGCTGATGAGGCAGAACATGGTTTGGAGTGTCCAAACTACCCCTGGCCTCACCAGGGTATTTTGAGCTCATACGATCATGCTTCGATTCGTCGTGGACATCAGGTTTACCAACAAGTTTGTGCATCATGTCATTCCATGTCTTTAATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAAACAAAAGCAATGGCTGCTGAAATTGAGGTAGTTGATGGACCCAATGATGAGGGTGAGATGTTCACTCGTCCGGGTAAACTCAGTGATCGGTTTCCTCAACCATATGCAAATGAACAAGCTGCTAGATTTGCTAACGGTGGAGCATACCCTCCGGATCTGAGCCTTATCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGTGTTTCGATCCGAGATGGTCTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTTGAATATGAAGATGGTACCCCTGCTACAGAAGCACAGATGGGGAAAGATGTTGTATCGTTCTTGTCATGGGCTGCTGAGCCAGAAATGGAAGAAAGGAAGCTGATGGGATTCAAATGGATCTTTGTGCTCTCTCTGGCTCTACTTCAGGCTGCATATTACCGCCGATTGAAGTGGTCAGTTTTCAAGTCCCGCAAGCTGGTTCTTGATGTAATCAATTAGCTAGCTGCCTTTGAGTTGCGTCTATTATTTTGCTTCTGGGAAGAAACGAATTGGCAATAATTATGTGTTAGAATGTATGTTTCTTGCGAAGCAATTTCCTTTTTGAATCATAGTTGTGATTTGCAGTGAAATGACCTGCAAGTGTCTGAGTTCCTCCTTTTTGATGGAAATAAACTGCATACGCCGATATTCATTATTTT 1358 43.3 MAGGGMIRQLLRKFPSQSSTPPLTSSLISKNQEAGFAGMNSFRRLALLGAGISGFFSFATLASADEAEHGLECPNYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIRDGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVFKSRKLVLDVIN 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27175143 27180721 - XM_039049640.1 Bhi11g00878 49590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00878 307 Pfam Cytochrome C1 family 78 294 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 ProSiteProfiles Cytochrome c family profile. 90 197 IPR009056 GO:0009055|GO:0020037
Bhi11g00878 307 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 26 307 - -
Bhi11g00878 307 PANTHER CYTOCHROME C1 26 307 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 Gene3D - 67 262 IPR036909 GO:0009055|GO:0020037
Bhi11g00878 307 SUPERFAMILY Cytochrome c 71 261 IPR036909 GO:0009055|GO:0020037
Bhi11g00878 307 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 262 305 IPR021157 -
Bhi11g00878 307 Gene3D - 263 305 - -
Bhi11g00878 307 PRINTS Cytochrome C1 signature 76 95 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 PRINTS Cytochrome C1 signature 96 115 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 PRINTS Cytochrome C1 signature 141 161 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 PRINTS Cytochrome C1 signature 174 198 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 PRINTS Cytochrome C1 signature 212 223 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 PRINTS Cytochrome C1 signature 223 242 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 PRINTS Cytochrome C1 signature 243 262 IPR002326 GO:0009055|GO:0020037
Bhi11g00878 307 PRINTS Cytochrome C1 signature 262 277 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00053 Bhi-Chr8:2446181 Bhi11g00878 Bhi-Chr11:27175143 1.23E-08 dispersed
Bhi08g00054 Bhi-Chr8:2446187 Bhi11g00878 Bhi-Chr11:27175143 8.33E-13 dispersed
Bhi11g00878 Bhi-Chr11:27175143 Bhi11g00880 Bhi-Chr11:27175143 0 dispersed
Bhi11g00878 Bhi-Chr11:27175143 Bhi11g00879 Bhi-Chr11:27175143 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00878 K00413 - csv:101215010 604.749