Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00894 CTCTCTCTAACACAAACACTATGGCTCCTGCCACTAACTGGCTTTCTTTCTCTCTTTCCCCCATTGAAATGCTTCGCTCCACTGACTCCCCCTTCGTTCCTTATGAATCTTCCTCCTCCACCCCTTCCCCTCACTATCTCTTCGACAACTTCTACTCTCATAATGGATGGAGTAGCAACAACAATGCTAATTCTCACCCAAAATCATCTCAACTTTTCTTCATGGATGGAGATGATCAAAACAACCAAGTTGTAGCTGTCAAAGAAGATGATACTTTTCTTCATCCACAAACCCATCATCATCATCATCAACCCAAGCTTGAAGATTTCCTGGGCGATTCTTCCTCCTTGGTACGATATTCCGACAGCCAAACCGACACTCAAGATTCCTCTTTGACTCATATTTACGACCATCCGGCCTCCGCCCACTACTTTCCCGACCAACAAGATCTCAAAACCATTGCTGCTTTTCAAGCTTTTTCAACGAACTCTGGCTCTGAAGTTGATGATTCTGCTTCTATTGCTAGAACCCACATCCCTTCTGCTCATTCTATCGACTCTTCTTCACTCACTAATAATGACTTGCCCTCTTTCTCTAACTGTCCTACTGGTGCTCTCTCACTCGCCGTTGCTCACTCCTCCGATACCCCTCCTCCTGCTCCTGCGCCTATTGTGCCTCTAGATTCTGAATCCAATAAGAAAATTGCTGATACTTTTGGCCAGAGAACTTCCATTTACAGAGGAGTCACCAGGCACAGATGGACGGGTAGATACGAAGCGCATCTGTGGGATAACAGCTGTAGAAGAGAGGGTCAGGCTAGGAAAGGACGTCAAGTTTACTTAGGTGGGTATGATAAGGAGGAAAAAGCAGCTAGGGCTTATGATTTGGCAGCTTTGAAGTACTGGGGTCCCACAGCAACCACCAATTTTCCTGTTTCGAATTATGCCAAGGAATTAGAAGAAATGAAACATGTCACCAAGCAAGAGTTTATTGCTTCTTTGCGAAGAAAGAGCAGTGGTTTCTCACGTGGTGCCTCTATTTATAGAGGTGTAACAAGGCATCATCAGCAGGGTCGATGGCAGGCAAGAATTGGTCGTGTTGCTGGGAACAAGGACTTGTATCTTGGGACGTTTGCCACTGAGGAGGAAGCAGCCGAGGCTTACGATATAGCAGCAATAAAGTTCAGAGGTTTGAATGCTGTGACGAACTTCGAGATGAGCCGATATGATGTTGAAGCTATTGCGAAGAGTGCACTGCCTATTGGGGGTGCAGCAAAGAGGCTGAAGCTTTGCCTGGAATCCGATCAGAAGCCGATTCCGAATCACGATCAAGCAACCCAATGCAGCAGTGGTAGCAACAATATCAACTTCAGCACCACCATGCAGGCTGTGCCGCCTATCCCTTGTGGAATTCCATATGACACTGCAGCCATGCTGTATCACCATAATTACTTCCATCATCTTCAACCTAACGCCATCGTCTCATCGGAGTCGACCAGCCCCGGTATTGCAATGCCGGGGACCGTGGCACCTCAAGCAGCCGAGTTTTTTGTTTGGCCTCACCAATCGTATTAGGTTTTTCCGTGTTTACTGATATGATCGATGCAAATGCAGCTAACAATATATGACCGAAGTCTTGGTTTGATAACAGTGTTGCGGGGCGACTCGGATTTTTATCCCAATGACTTGAAATGAAATGA 1699 46.38 MAPATNWLSFSLSPIEMLRSTDSPFVPYESSSSTPSPHYLFDNFYSHNGWSSNNNANSHPKSSQLFFMDGDDQNNQVVAVKEDDTFLHPQTHHHHHQPKLEDFLGDSSSLVRYSDSQTDTQDSSLTHIYDHPASAHYFPDQQDLKTIAAFQAFSTNSGSEVDDSASIARTHIPSAHSIDSSSLTNNDLPSFSNCPTGALSLAVAHSSDTPPPAPAPIVPLDSESNKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYAKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGLNAVTNFEMSRYDVEAIAKSALPIGGAAKRLKLCLESDQKPIPNHDQATQCSSGSNNINFSTTMQAVPPIPCGIPYDTAAMLYHHNYFHHLQPNAIVSSESTSPGIAMPGTVAPQAAEFFVWPHQSY 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27674997 27679089 + XM_039050029.1 Bhi11g00894 49606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00894 517 CDD AP2 237 306 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 ProSiteProfiles AP2/ERF domain profile. 238 304 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 PRINTS Ethylene responsive element binding protein signature 239 250 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 PRINTS Ethylene responsive element binding protein signature 380 400 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 SUPERFAMILY DNA-binding domain 339 400 IPR016177 GO:0003677
Bhi11g00894 517 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 5 496 - -
Bhi11g00894 517 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 496 - -
Bhi11g00894 517 CDD AP2 339 400 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 Gene3D AP2/ERF domain 238 306 IPR036955 GO:0003700|GO:0006355
Bhi11g00894 517 Gene3D AP2/ERF domain 340 400 IPR036955 GO:0003700|GO:0006355
Bhi11g00894 517 SUPERFAMILY DNA-binding domain 237 306 IPR016177 GO:0003677
Bhi11g00894 517 SMART rav1_2 238 310 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 SMART rav1_2 340 404 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 Pfam AP2 domain 238 296 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 Pfam AP2 domain 340 390 IPR001471 GO:0003700|GO:0006355
Bhi11g00894 517 ProSiteProfiles AP2/ERF domain profile. 340 398 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00894 Bhi-Chr11:27674997 Bhi02g00752 Bhi-Chr2:15100969 3.85E-126 dispersed
Bhi11g00894 Bhi-Chr11:27674997 Bhi03g01071 Bhi-Chr3:21679247 3.04E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2347 PF00847 AP2 9.80E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00894 K09285 - csv:101217714 872.463