Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00900 CAATCGTGTTCTTTTCATTTCCTTGCTTTCTCTATACGCATGAACGTCTAAAAGAACAGGAAAAACAGAGCCGGTGACCTCGATTGGAAGCTGTAGAACTTTGGCCACCAACAAAATTTGATTCCCATTTGAGTAGTTTTCAGCTATCATTGAGCTGCATAGGAGTCTCATTGTCCAAGTTCCATCTTGCCAGCATTTATTTAGTCTTAGCAATGGTTCTTGTTGGTTCTTTGCAACTGTCCTATCATCTGGGACTGCGGAGAAACTATTTGCATGAAGAAAATCTTAAGTTTACCTCTCAGAGCTATAGCACACGGCTATTGAATGTAGCCAGTCCATCTCTTTTTTTTCAGAAGAACACTTGGAGCACTCATTTATTTAGCATGAAATACCCACCTAATTACATTGTGCCTTCTAGATACAATGTACTCAGGTGCCAGTCGTCATTGATGACAAATCAACCACTGGATCCCCCTGGAATGAAGGCTGCTATAGTGGCATTGACAAAGTTTTGTAATGTATTAGGTGGTTGTCCTCCTTCAGTGGTTAAGTTAGTTCCTGCAGTTTGTATTATGGTGTTTGCTGTATGGGGTCTTGGACCATTTTTACGTTATACGAGAAGCCTATTCCATAATGATATTAACTGGAAGAAAAGTCGGACGTATAATATCATGACATTGTATCTTCAACCATTATTGCTGTGGACTGGAGCAACACTTATTTGCAGAGCTTTAGATCCAGTAGTTTTACCTACAGAGTCCAGCCAAGTTGTGAAGCAACGAGTGTTGAATTTTGTTAGGTCGTTGTCCACCGTGCTGGCCTTTGCATATTGCTTATCTAGCATGATTCAACAAGCACAGAAATTCTTCTCAGAGAGTACTGAATCCAGTGACGCGAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTATACTCTGCAGTATGGGTTGCGGCTCTCTCATTGTTCATGGAGCTCTTGGGCTTTTCTACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTTTTGCTGACCTTAGCTGGCCGTGAGATTTTCACCAACTTTCTCTCAAGTGTGATGATTCATGCAACTCGTCCTTTTGTTGTTAATGAGTGGATCCAAACAAAAATCGAGGGCTATGAAGTTTCTGGCACTGTTGAGCATGTAGGGTGGTGGTCGCCAACAATCATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATAAGTTTACCATGAATGTCGTCAGAAATCTCAGTCAAAAAACTCATTGGCGGATTAAAACCCATCTTGCCATTAGCCATTTGGACGTCAATAAAATCAACAACATTGTCGCAGACATGCGGAAAGTCTTGGCAAAGAACCCTCAAGTTGAACAACAGAAATTGCATAGAAGAGTATTTTTGGAAAATGTGGATCCTGAAAATCAGGCACTTCTGATTTTGATATCTTGTTTTGTCAAGACTTCGCATTTTGAAGAATACCTTTGTGTAAAGGAAGCTATAATTTTGGATCTTCTTAGAGTCATTAGACATCACCGGGCTCGACTTGCAACACCAATCCGCACAATGCAGAAGATGCATAGTGATTCAGACATGGAAAGCGTTCCATTTTCTGATTCAATATTTGGCCACCGTGGTGTGACTTCGAATCGCCGCATGTTGATGATCGAGCCCCCTTACAAAGTTTATGGAGAAGATAGAAAGCAAAGCCATAGCAGGACATCACGCACAACTGGAGAACAAAATGGTAAGCCCATTTCACGGTCATCGGGTGACAGCAAGGCAGTTAAAGAGACGTCATCTGATAAAAAGACGGAAGTTAAGACTGGAGGAGATGTTGATACAAAAAAGCAGCCCAAAGTTTCAATGTCGACCTCTGAAGATAAATCAAGCAATGAATTGAAACATAAATCGTCATCAAGGTCTGCTGCAAGTATCTCTGACATGCCAACTTCTGATGCCAAAACAACTAAATCAGATGCTGATAATTCGATGGAAGATTCCATTCCCAAGCAATCCGAAAATAGCTCAGGAAGTAACAGGCAGAACTTGAAGCCTTCCCTTCCTGCTGTTTCCTTTCCAGAAGATGTTAAGAAATCAGGAGAAACTACTTCAGCAGCTTCACAGCCAAGGATAGAAGGCGAGCAGACTACAGTTTCAAATCAATCAATAACAAAGCCTGGCGTAGAAGAGAATATAATCCTTGGTGTTGCTTTGGATGGCTCTAAGAGAACACTTCCTATTGAGGACGACTTACCTACTGCATCAGGAGCAAAAGATTTGGCTGCATGCAGGAATGGGAACAGTGCGAATGGAGCAACAACGCCAGATAAGAATACGAAACGTCAATCTCCTTCTCCTACCACATCTTCTAGTGAGTAGTAAGACTATGGTTTCATGCAGGGGATCCAGATTATTTGGTAAACAACTTTTTTGACAGAGAAGTTTGCATTGAGGTCCTATGAAGCTGCGTTTTCTCAGCGCTTGCAACAAATTATTCTCACCTGACTACAGTTTGCAATGGGGCAGGAATGTACATTTGTGCCATTTTGACTCTTGTTTCAGTGAATTCTGAAACAGCAAGCTGTTTACTTTGAGGATCAGCGGCCGTTAATGACAACACATCCTTTCAATTGGTAACATTTTCTTGATATAGAGCTTACGTTTTGTACATAAAACCTGTATCTTGAACTATAAATTATGTATACTAACAAAGAATATGCTAGATTGAATCAATGCATTTTGTAGAAGGATCTCAATTGTCTTCAAGAGAATACTGGGAATTTCGCATATAATGAACAAAATGCTCAGTTTGTAGTTCTGTTACAAGATTTTGAGGAAAATGAAAGCCGTTCGGCTCAGACATTTCTTTTTCCGA 2886 40.85 MVLVGSLQLSYHLGLRRNYLHEENLKFTSQSYSTRLLNVASPSLFFQKNTWSTHLFSMKYPPNYIVPSRYNVLRCQSSLMTNQPLDPPGMKAAIVALTKFCNVLGGCPPSVVKLVPAVCIMVFAVWGLGPFLRYTRSLFHNDINWKKSRTYNIMTLYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAYCLSSMIQQAQKFFSESTESSDARNMGFQFAWKAVYSAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVDPENQALLILISCFVKTSHFEEYLCVKEAIILDLLRVIRHHRARLATPIRTMQKMHSDSDMESVPFSDSIFGHRGVTSNRRMLMIEPPYKVYGEDRKQSHSRTSRTTGEQNGKPISRSSGDSKAVKETSSDKKTEVKTGGDVDTKKQPKVSMSTSEDKSSNELKHKSSSRSAASISDMPTSDAKTTKSDADNSMEDSIPKQSENSSGSNRQNLKPSLPAVSFPEDVKKSGETTSAASQPRIEGEQTTVSNQSITKPGVEENIILGVALDGSKRTLPIEDDLPTASGAKDLAACRNGNSANGATTPDKNTKRQSPSPTTSSSE 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27799182 27808150 + XM_039049294.1 Bhi11g00900 49612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00900 725 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 716 - -
Bhi11g00900 725 MobiDBLite consensus disorder prediction 507 526 - -
Bhi11g00900 725 MobiDBLite consensus disorder prediction 493 725 - -
Bhi11g00900 725 MobiDBLite consensus disorder prediction 630 660 - -
Bhi11g00900 725 MobiDBLite consensus disorder prediction 600 619 - -
Bhi11g00900 725 MobiDBLite consensus disorder prediction 699 725 - -
Bhi11g00900 725 Pfam Mechanosensitive ion channel 239 445 IPR006685 GO:0016020|GO:0055085
Bhi11g00900 725 Gene3D - 192 295 - -
Bhi11g00900 725 MobiDBLite consensus disorder prediction 527 547 - -
Bhi11g00900 725 MobiDBLite consensus disorder prediction 569 590 - -
Bhi11g00900 725 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 716 IPR045042 -
Bhi11g00900 725 Gene3D - 297 352 IPR023408 -
Bhi11g00900 725 SUPERFAMILY Sm-like ribonucleoproteins 281 351 IPR010920 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00939 Bhi-Chr4:23892852 Bhi11g00900 Bhi-Chr11:27799182 0 dispersed
Bhi11g00900 Bhi-Chr11:27799182 Bhi11g00902 Bhi-Chr11:27799324 0 dispersed
Bhi11g00900 Bhi-Chr11:27799182 Bhi11g00901 Bhi-Chr11:27799189 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00900 K22047 - csv:101217250 1244.57