Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi11g00901 | GTTCTTTTCATTTCCTTGCTTTCTCTATACGCATGAACGTCTAAAAGAACAGGAAAAACAGAGCCGGTGACCTCGATTGGAAGCTGTAGAACTTTGGCCACCAACAAAATTTGATTCCCATTTGATTTTCAGCTATCATTGAGCTGCATAGGAGTCTCATTGTCCAAGTTCCATCTTGCCAGCATTTATTTAGTCTTAGCAATGGTTCTTGTTGGTTCTTTGCAACTGTCCTATCATCTGGGACTGCGGAGAAACTATTTGCATGAAGAAAATCTTAAGTTTACCTCTCAGAGCTATAGCACACGGCTATTGAATGTAGCCAGTCCATCTCTTTTTTTTCAGAAGAACACTTGGAGCACTCATTTATTTAGCATGAAATACCCACCTAATTACATTGTGCCTTCTAGATACAATGTACTCAGGTGCCAGTCGTCATTGATGACAAATCAACCACTGGATCCCCCTGGAATGAAGGCTGCTATAGTGGCATTGACAAAGTTTTGTAATGTATTAGGTGGTTGTCCTCCTTCAGTGGTTAAGTTAGTTCCTGCAGTTTGTATTATGGTGTTTGCTGTATGGGGTCTTGGACCATTTTTACGTTATACGAGAAGCCTATTCCATAATGATATTAACTGGAAGAAAAGTCGGACGTATAATATCATGACATTGTATCTTCAACCATTATTGCTGTGGACTGGAGCAACACTTATTTGCAGAGCTTTAGATCCAGTAGTTTTACCTACAGAGTCCAGCCAAGTTGTGAAGCAACGAGTGTTGAATTTTGTTAGGTCGTTGTCCACCGTGCTGGCCTTTGCATATTGCTTATCTAGCATGATTCAACAAGCACAGAAATTCTTCTCAGAGAGTACTGAATCCAGTGACGCGAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTATACTCTGCAGTATGGGTTGCGGCTCTCTCATTGTTCATGGAGCTCTTGGGCTTTTCTACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTTTTGCTGACCTTAGCTGGCCGTGAGATTTTCACCAACTTTCTCTCAAGTGTGATGATTCATGCAACTCGTCCTTTTGTTGTTAATGAGTGGATCCAAACAAAAATCGAGGGCTATGAAGTTTCTGGCACTGTTGAGCATGTAGGGTGGTGGTCGCCAACAATCATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATAAGTTTACCATGAATGTCGTCAGAAATCTCAGTCAAAAAACTCATTGGCGGATTAAAACCCATCTTGCCATTAGCCATTTGGACGTCAATAAAATCAACAACATTGTCGCAGACATGCGGAAAGTCTTGGCAAAGAACCCTCAAGTTGAACAACAGAAATTGCATAGAAGAGTATTTTTGGAAAATGTGGATCCTGAAAATCAGGCACTTCTGATTTTGATATCTTGTTTTGTCAAGACTTCGCATTTTGAAGAATACCTTTGTGTAAAGGAAGCTATAATTTTGGATCTTCTTAGAGTCATTAGACATCACCGGGCTCGACTTGCAACACCAATCCGCACAATGCAGAAGATGCATAGTGATTCAGACATGGAAAGCGTTCCATTTTCTGATTCAATATTTGGCCACCGTGGTGTGACTTCGAATCGCCGCATGTTGATGATCGAGCCCCCTTACAAAGTTTATGGAGAAGATAGAAAGCAAAGCCATAGCAGGACATCACGCACAACTGGAGAACAAAATGGTAAGCCCATTTCACGGTCATCGGGTGACAGCAAGGCAGTTAAAGAGACGTCATCTGATAAAAAGACGGAAGTTAAGACTGGAGGAGATGTTGATACAAAAAAGCAGCCCAAAGTTTCAATGTCGACCTCTGAAGATAAATCAAGCAATGAATTGAAACATAAATCGTCATCAAGGTCTGCTGCAAGTATCTCTGACATGCCAACTTCTGATGCCAAAACAACTAAATCAGATGCTGATAATTCGATGGAAGATTCCATTCCCAAGCAATCCGAAAATAGCTCAGGAAGTAACAGGCAGAACTTGAAGCCTTCCCTTCCTGCTGTTTCCTTTCCAGAAGATGTTAAGAAATCAGGAGAAACTACTTCAGCAGCTTCACAGCCAAGGATAGAAGGCGAGCAGACTACAGTTTCAAATCAATCAATAACAAAGCCTGGCGTAGAAGAGAATATAATCCTTGGTGTTGCTTTGGATGGCTCTAAGAGAACACTTCCTATTGAGGACGACTTACCTACTGCATCAGGAGCAAAAGATTTGGCTGCATGCAGGAATGGGAACAGTGCGAATGGAGCAACAACGCCAGATAAGAATACGAAACGTCAATCTCCTTCTCCTACCACATCTTCTAGTGAGTAGTAAGACTATGGTTTCATGCAGGGGATCCAGATTATTTGGTAAACAACTTTTTTGACAGAGAAGTTTGCATTGAGGTCCTATGAAGCTGCGTTTTCTCAGCGCTTGCAACAAATTATTCTCACCTGACTACAGTTTGCAATGGGGCAGGAATGTACATTTGTGCCATTTTGACTCTTGTTTCAGTGAATTCTGAAACAGCAAGCTGTTTACTTTGAGGATCAGCGGCCGTTAATGACAACACATCCTTTCAATTGGTAACATTTTCTTGATATAGAGCTTACGTTTTGTACATAAAACCTGTATCTTGAACTATAAATTATGTATACTAACAAAGAATATGCTAGATTGAATCAATGCATTTTGTAGAAGGATCTCAATTGTCTTCAAGAGAATACTGGGAATTTCGCATATAATGAACAAAATGCTCAGTTTGTAGTTCTGTTACAAGATTTTGAGGAAAATGAAAGCCGTTCGGCTCAGACATTTCTTTTTCCGA | 2875 | 40.83 | MVLVGSLQLSYHLGLRRNYLHEENLKFTSQSYSTRLLNVASPSLFFQKNTWSTHLFSMKYPPNYIVPSRYNVLRCQSSLMTNQPLDPPGMKAAIVALTKFCNVLGGCPPSVVKLVPAVCIMVFAVWGLGPFLRYTRSLFHNDINWKKSRTYNIMTLYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAYCLSSMIQQAQKFFSESTESSDARNMGFQFAWKAVYSAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVDPENQALLILISCFVKTSHFEEYLCVKEAIILDLLRVIRHHRARLATPIRTMQKMHSDSDMESVPFSDSIFGHRGVTSNRRMLMIEPPYKVYGEDRKQSHSRTSRTTGEQNGKPISRSSGDSKAVKETSSDKKTEVKTGGDVDTKKQPKVSMSTSEDKSSNELKHKSSSRSAASISDMPTSDAKTTKSDADNSMEDSIPKQSENSSGSNRQNLKPSLPAVSFPEDVKKSGETTSAASQPRIEGEQTTVSNQSITKPGVEENIILGVALDGSKRTLPIEDDLPTASGAKDLAACRNGNSANGATTPDKNTKRQSPSPTTSSSE | 725 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 27799189 | 27808150 | + | XM_039049298.1 | Bhi11g00901 | 49613 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi11g00901 | 725 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC | 1 | 716 | - | - | |
| Bhi11g00901 | 725 | MobiDBLite | consensus disorder prediction | 507 | 526 | - | - | |
| Bhi11g00901 | 725 | MobiDBLite | consensus disorder prediction | 493 | 725 | - | - | |
| Bhi11g00901 | 725 | MobiDBLite | consensus disorder prediction | 630 | 660 | - | - | |
| Bhi11g00901 | 725 | MobiDBLite | consensus disorder prediction | 600 | 619 | - | - | |
| Bhi11g00901 | 725 | MobiDBLite | consensus disorder prediction | 699 | 725 | - | - | |
| Bhi11g00901 | 725 | Pfam | Mechanosensitive ion channel | 239 | 445 | IPR006685 | GO:0016020|GO:0055085 | |
| Bhi11g00901 | 725 | Gene3D | - | 192 | 295 | - | - | |
| Bhi11g00901 | 725 | MobiDBLite | consensus disorder prediction | 527 | 547 | - | - | |
| Bhi11g00901 | 725 | MobiDBLite | consensus disorder prediction | 569 | 590 | - | - | |
| Bhi11g00901 | 725 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 716 | IPR045042 | - | |
| Bhi11g00901 | 725 | Gene3D | - | 297 | 352 | IPR023408 | - | |
| Bhi11g00901 | 725 | SUPERFAMILY | Sm-like ribonucleoproteins | 281 | 351 | IPR010920 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi11g00901 | Bhi-Chr11:27799189 | Bhi11g00903 | Bhi-Chr11:27799332 | 0 | dispersed | |
| Bhi11g00900 | Bhi-Chr11:27799182 | Bhi11g00901 | Bhi-Chr11:27799189 | 0 | tandem | |
| Bhi11g00901 | Bhi-Chr11:27799189 | Bhi11g00902 | Bhi-Chr11:27799324 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi11g00901 | K22047 | - | csv:101217250 | 1244.57 |