Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g00925 | AATTGAAAATAAACTGACATTCTCTCTCTCCCTTCTCTCTCTCTTTTCTCGAAGTCATTACATTGAAAAACCAACAAACCCTAAAAGTGTCCGTTCAATTTTCTTCTTCTTCTTTGCTTCAACTACTCCTTACATAGCTTAATTTCATCCCTTCCTCTCCACAAATTTTGCAGTTTCACTATTCAAATTCATACTGAAATCCCTAATCCTCTCACTGGGCGGCTCATTTTTGTGAGATTATGGAGGGAATGCCGCACCCAATACCCCGTACAGTGGAGGAGGTCTACGGCGACTTCAAGGGCAGGCGTGCCGGCTTGATCAAAGCCCTCACCACTGATGTCGAGAAGTTTTACCAGCAGTGCGATCCTGAGAAGGAGAACCTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCTGTTGAGGAGGTGCCTCCTGAGCTCCCGGAACCAGCATTAGGTATAAACTTTGCAAGGGATGGGATGCAGGAGAAAGACTGGTTATCCCTGGTTGCAGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTTTATTTTGGTGCTCGTTTTGGGTTTGGGAAGACTGAAAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGACTGGAAATGGTAAGCAGTCGAAAGAACAGTCTGCCACACATAACAATGGCAGTAAAAGCAAGTCGAGTGGAAAGATGCAGTCCCGGCAATTGGAGTCCCATAGCAAGGGAGTGAAAATGTCTCCACCACCAAAAGAGGATGAAGATAGCGGGGATGACGAGGAGGAAGAAGAAGATGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAATGACGAATTCTGGATTTGTTGTGATGTGTGTGAAAGATGGTTCCATGGAAAATGTGTGAAGATTACACCTGCAAAGGCGGAGCATATCAAGCAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGTTTGAATTTAGGATCTGAAAGTTGGAGATAGTTGCAGGGAAGGTAAACAAAGAAAAAGTAAAAAAAGAAGAAGAAGAAAGCAGGCACGACTCCGAGACTTGTGTTATTACAATTATAAAGCTAAATATGGTTGTTAAAAATCAGTTGACAAATTTGGTGAATTGGGATGGAATTTCAAGTTTTCCTACTTGTGTTATTCTTCTGTCTAATTCTAGAATTAGTGGTTTTCTCTATGAATCCCTCCCATTGATCTTTAAACAAATGTTATGAATATTTGTCATCCACCTCCCAAATTAAGCTGACTCATCCATTCACTTAGCTTAACACACTGTTTGGTTA | 1344 | 42.49 | MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQSKEQSATHNNGSKSKSSGKMQSRQLESHSKGVKMSPPPKEDEDSGDDEEEEEDDEQGATCGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 28642454 | 28649449 | + | XM_039048681.1 | Bhi11g00925 | 49637 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g00925 | 256 | MobiDBLite | consensus disorder prediction | 141 | 202 | - | - | |
Bhi11g00925 | 256 | SMART | PHD_3 | 202 | 250 | IPR001965 | - | |
Bhi11g00925 | 256 | PANTHER | PHD FINGER PROTEIN ALFIN-LIKE 7 | 1 | 253 | - | - | |
Bhi11g00925 | 256 | ProSiteProfiles | Zinc finger PHD-type profile. | 200 | 252 | IPR019787 | - | |
Bhi11g00925 | 256 | ProSitePatterns | Zinc finger PHD-type signature. | 203 | 249 | IPR019786 | - | |
Bhi11g00925 | 256 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 192 | 251 | IPR013083 | - | |
Bhi11g00925 | 256 | MobiDBLite | consensus disorder prediction | 184 | 201 | - | - | |
Bhi11g00925 | 256 | Pfam | Alfin | 11 | 139 | IPR021998 | GO:0006355|GO:0042393 | |
Bhi11g00925 | 256 | SUPERFAMILY | FYVE/PHD zinc finger | 191 | 253 | IPR011011 | - | |
Bhi11g00925 | 256 | MobiDBLite | consensus disorder prediction | 141 | 172 | - | - | |
Bhi11g00925 | 256 | CDD | PHD_AL_plant | 203 | 252 | IPR044104 | - | |
Bhi11g00925 | 256 | PANTHER | CPG BINDING PROTEIN | 1 | 253 | IPR045104 | GO:0006355|GO:0042393 | |
Bhi11g00925 | 256 | Pfam | PHD-finger | 203 | 252 | IPR019787 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi11g00925 | Bhi-Chr11:28642454 | Bhi09g00348 | Bhi-Chr9:7201780 | 3.61E-112 | dispersed | |
Bhi11g00925 | Bhi-Chr11:28642454 | Bhi11g00926 | Bhi-Chr11:28642454 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2349 | PF12165 | Alfin | 2.50E-68 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g00925 | - | - | csv:101212601 | 481.485 |