Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00925 AATTGAAAATAAACTGACATTCTCTCTCTCCCTTCTCTCTCTCTTTTCTCGAAGTCATTACATTGAAAAACCAACAAACCCTAAAAGTGTCCGTTCAATTTTCTTCTTCTTCTTTGCTTCAACTACTCCTTACATAGCTTAATTTCATCCCTTCCTCTCCACAAATTTTGCAGTTTCACTATTCAAATTCATACTGAAATCCCTAATCCTCTCACTGGGCGGCTCATTTTTGTGAGATTATGGAGGGAATGCCGCACCCAATACCCCGTACAGTGGAGGAGGTCTACGGCGACTTCAAGGGCAGGCGTGCCGGCTTGATCAAAGCCCTCACCACTGATGTCGAGAAGTTTTACCAGCAGTGCGATCCTGAGAAGGAGAACCTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCTGTTGAGGAGGTGCCTCCTGAGCTCCCGGAACCAGCATTAGGTATAAACTTTGCAAGGGATGGGATGCAGGAGAAAGACTGGTTATCCCTGGTTGCAGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTTTATTTTGGTGCTCGTTTTGGGTTTGGGAAGACTGAAAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGACTGGAAATGGTAAGCAGTCGAAAGAACAGTCTGCCACACATAACAATGGCAGTAAAAGCAAGTCGAGTGGAAAGATGCAGTCCCGGCAATTGGAGTCCCATAGCAAGGGAGTGAAAATGTCTCCACCACCAAAAGAGGATGAAGATAGCGGGGATGACGAGGAGGAAGAAGAAGATGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAATGACGAATTCTGGATTTGTTGTGATGTGTGTGAAAGATGGTTCCATGGAAAATGTGTGAAGATTACACCTGCAAAGGCGGAGCATATCAAGCAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGTTTGAATTTAGGATCTGAAAGTTGGAGATAGTTGCAGGGAAGGTAAACAAAGAAAAAGTAAAAAAAGAAGAAGAAGAAAGCAGGCACGACTCCGAGACTTGTGTTATTACAATTATAAAGCTAAATATGGTTGTTAAAAATCAGTTGACAAATTTGGTGAATTGGGATGGAATTTCAAGTTTTCCTACTTGTGTTATTCTTCTGTCTAATTCTAGAATTAGTGGTTTTCTCTATGAATCCCTCCCATTGATCTTTAAACAAATGTTATGAATATTTGTCATCCACCTCCCAAATTAAGCTGACTCATCCATTCACTTAGCTTAACACACTGTTTGGTTA 1344 42.49 MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQSKEQSATHNNGSKSKSSGKMQSRQLESHSKGVKMSPPPKEDEDSGDDEEEEEDDEQGATCGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28642454 28649449 + XM_039048681.1 Bhi11g00925 49637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00925 256 MobiDBLite consensus disorder prediction 141 202 - -
Bhi11g00925 256 SMART PHD_3 202 250 IPR001965 -
Bhi11g00925 256 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 7 1 253 - -
Bhi11g00925 256 ProSiteProfiles Zinc finger PHD-type profile. 200 252 IPR019787 -
Bhi11g00925 256 ProSitePatterns Zinc finger PHD-type signature. 203 249 IPR019786 -
Bhi11g00925 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 251 IPR013083 -
Bhi11g00925 256 MobiDBLite consensus disorder prediction 184 201 - -
Bhi11g00925 256 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Bhi11g00925 256 SUPERFAMILY FYVE/PHD zinc finger 191 253 IPR011011 -
Bhi11g00925 256 MobiDBLite consensus disorder prediction 141 172 - -
Bhi11g00925 256 CDD PHD_AL_plant 203 252 IPR044104 -
Bhi11g00925 256 PANTHER CPG BINDING PROTEIN 1 253 IPR045104 GO:0006355|GO:0042393
Bhi11g00925 256 Pfam PHD-finger 203 252 IPR019787 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00925 Bhi-Chr11:28642454 Bhi09g00348 Bhi-Chr9:7201780 3.61E-112 dispersed
Bhi11g00925 Bhi-Chr11:28642454 Bhi11g00926 Bhi-Chr11:28642454 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2349 PF12165 Alfin 2.50E-68 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00925 - - csv:101212601 481.485