Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g00926 | AATTGAAAATAAACTGACATTCTCTCTCTCCCTTCTCTCTCTCTTTTCTCGAAGTCATTACATTGAAAAACCAACAAACCCTAAAAGTGTCCGTTCAATTTTCTTCTTCTTCTTTGCTTCAACTACTCCTTACATAGCTTAATTTCATCCCTTCCTCTCCACAAATTTTGCAGTTTCACTATTCAAATTCATACTGAAATCCCTAATCCTCTCACTGGGCGGCTCATTTTTGTGAGATTATGGAGGGAATGCCGCACCCAATACCCCGTACAGTGGAGGAGGTCTACGGCGACTTCAAGGGCAGGCGTGCCGGCTTGATCAAAGCCCTCACCACTGATGTCGAGAAGTTTTACCAGCAGTGCGATCCTGAGAAGGAGAACCTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCTGTTGAGGAGGTGCCTCCTGAGCTCCCGGAACCAGCATTAGGTATAAACTTTGCAAGGGATGGGATGCAGGAGAAAGACTGGTTATCCCTGGTTGCAGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTTTATTTTGGTGCTCGTTTTGGGTTTGGGAAGACTGAAAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGACTGGAAATGGTAAGCAGTCGAAAGAACAGTCTGCCACACATAACAATGGCAGTAAAAGCAAGTCGAGTGGAAAGATGTCCCGGCAATTGGAGTCCCATAGCAAGGGAGTGAAAATGTCTCCACCACCAAAAGAGGATGAAGATAGCGGGGATGACGAGGAGGAAGAAGAAGATGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAATGACGAATTCTGGATTTGTTGTGATGTGTGTGAAAGATGGTTCCATGGAAAATGTGTGAAGATTACACCTGCAAAGGCGGAGCATATCAAGCAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGTTTGAATTTAGGATCTGAAAGTTGGAGATAGTTGCAGGGAAGGTAAACAAAGAAAAAGTAAAAAAAGAAGAAGAAGAAAGCAGGCACGACTCCGAGACTTGTGTTATTACAATTATAAAGCTAAATATGGTTGTTAAAAATCAGTTGACAAATTTGGTGAATTGGGATGGAATTTCAAGTTTTCCTACTTGTGTTATTCTTCTGTCTAATTCTAGAATTAGTGGTTTTCTCTATGAATCCCTCCCATTGATCTTTAAACAAATGTTATGAATATTTGTCATCCACCTCCCAAATTAAGCTGACTCATCCATTCACTTAGCTTAACACACTGTTTGGTTA | 1341 | 42.43 | MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQSKEQSATHNNGSKSKSSGKMSRQLESHSKGVKMSPPPKEDEDSGDDEEEEEDDEQGATCGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 28642454 | 28649449 | + | XM_039048683.1 | Bhi11g00926 | 49638 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g00926 | 255 | ProSiteProfiles | Zinc finger PHD-type profile. | 199 | 251 | IPR019787 | - | |
Bhi11g00926 | 255 | SUPERFAMILY | FYVE/PHD zinc finger | 190 | 252 | IPR011011 | - | |
Bhi11g00926 | 255 | PANTHER | CPG BINDING PROTEIN | 1 | 252 | IPR045104 | GO:0006355|GO:0042393 | |
Bhi11g00926 | 255 | MobiDBLite | consensus disorder prediction | 183 | 200 | - | - | |
Bhi11g00926 | 255 | CDD | PHD_AL_plant | 202 | 251 | IPR044104 | - | |
Bhi11g00926 | 255 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 191 | 250 | IPR013083 | - | |
Bhi11g00926 | 255 | Pfam | Alfin | 11 | 139 | IPR021998 | GO:0006355|GO:0042393 | |
Bhi11g00926 | 255 | ProSitePatterns | Zinc finger PHD-type signature. | 202 | 248 | IPR019786 | - | |
Bhi11g00926 | 255 | PANTHER | PHD FINGER PROTEIN ALFIN-LIKE 7 | 1 | 252 | - | - | |
Bhi11g00926 | 255 | Pfam | PHD-finger | 202 | 251 | IPR019787 | - | |
Bhi11g00926 | 255 | MobiDBLite | consensus disorder prediction | 163 | 182 | - | - | |
Bhi11g00926 | 255 | SMART | PHD_3 | 201 | 249 | IPR001965 | - | |
Bhi11g00926 | 255 | MobiDBLite | consensus disorder prediction | 141 | 201 | - | - | |
Bhi11g00926 | 255 | MobiDBLite | consensus disorder prediction | 141 | 162 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi11g00926 | Bhi-Chr11:28642454 | Bhi04g01504 | Bhi-Chr4:37051316 | 5.34E-112 | dispersed | |
Bhi11g00925 | Bhi-Chr11:28642454 | Bhi11g00926 | Bhi-Chr11:28642454 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2350 | PF12165 | Alfin | 2.40E-68 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g00926 | - | - | csv:101212601 | 488.419 |