Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g00926 AATTGAAAATAAACTGACATTCTCTCTCTCCCTTCTCTCTCTCTTTTCTCGAAGTCATTACATTGAAAAACCAACAAACCCTAAAAGTGTCCGTTCAATTTTCTTCTTCTTCTTTGCTTCAACTACTCCTTACATAGCTTAATTTCATCCCTTCCTCTCCACAAATTTTGCAGTTTCACTATTCAAATTCATACTGAAATCCCTAATCCTCTCACTGGGCGGCTCATTTTTGTGAGATTATGGAGGGAATGCCGCACCCAATACCCCGTACAGTGGAGGAGGTCTACGGCGACTTCAAGGGCAGGCGTGCCGGCTTGATCAAAGCCCTCACCACTGATGTCGAGAAGTTTTACCAGCAGTGCGATCCTGAGAAGGAGAACCTGTGTCTCTATGGACTTCCAAATGAAACGTGGGAAGTTAACTTGCCTGTTGAGGAGGTGCCTCCTGAGCTCCCGGAACCAGCATTAGGTATAAACTTTGCAAGGGATGGGATGCAGGAGAAAGACTGGTTATCCCTGGTTGCAGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTTTATTTTGGTGCTCGTTTTGGGTTTGGGAAGACTGAAAGGAAGAGGCTATTCCAGATGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGACTGGAAATGGTAAGCAGTCGAAAGAACAGTCTGCCACACATAACAATGGCAGTAAAAGCAAGTCGAGTGGAAAGATGTCCCGGCAATTGGAGTCCCATAGCAAGGGAGTGAAAATGTCTCCACCACCAAAAGAGGATGAAGATAGCGGGGATGACGAGGAGGAAGAAGAAGATGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAATGACGAATTCTGGATTTGTTGTGATGTGTGTGAAAGATGGTTCCATGGAAAATGTGTGAAGATTACACCTGCAAAGGCGGAGCATATCAAGCAATACAAGTGTCCAAGTTGCAGTAACAAGAGAGCAAGGGTTTGAATTTAGGATCTGAAAGTTGGAGATAGTTGCAGGGAAGGTAAACAAAGAAAAAGTAAAAAAAGAAGAAGAAGAAAGCAGGCACGACTCCGAGACTTGTGTTATTACAATTATAAAGCTAAATATGGTTGTTAAAAATCAGTTGACAAATTTGGTGAATTGGGATGGAATTTCAAGTTTTCCTACTTGTGTTATTCTTCTGTCTAATTCTAGAATTAGTGGTTTTCTCTATGAATCCCTCCCATTGATCTTTAAACAAATGTTATGAATATTTGTCATCCACCTCCCAAATTAAGCTGACTCATCCATTCACTTAGCTTAACACACTGTTTGGTTA 1341 42.43 MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQSKEQSATHNNGSKSKSSGKMSRQLESHSKGVKMSPPPKEDEDSGDDEEEEEDDEQGATCGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28642454 28649449 + XM_039048683.1 Bhi11g00926 49638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g00926 255 ProSiteProfiles Zinc finger PHD-type profile. 199 251 IPR019787 -
Bhi11g00926 255 SUPERFAMILY FYVE/PHD zinc finger 190 252 IPR011011 -
Bhi11g00926 255 PANTHER CPG BINDING PROTEIN 1 252 IPR045104 GO:0006355|GO:0042393
Bhi11g00926 255 MobiDBLite consensus disorder prediction 183 200 - -
Bhi11g00926 255 CDD PHD_AL_plant 202 251 IPR044104 -
Bhi11g00926 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 250 IPR013083 -
Bhi11g00926 255 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Bhi11g00926 255 ProSitePatterns Zinc finger PHD-type signature. 202 248 IPR019786 -
Bhi11g00926 255 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 7 1 252 - -
Bhi11g00926 255 Pfam PHD-finger 202 251 IPR019787 -
Bhi11g00926 255 MobiDBLite consensus disorder prediction 163 182 - -
Bhi11g00926 255 SMART PHD_3 201 249 IPR001965 -
Bhi11g00926 255 MobiDBLite consensus disorder prediction 141 201 - -
Bhi11g00926 255 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g00926 Bhi-Chr11:28642454 Bhi04g01504 Bhi-Chr4:37051316 5.34E-112 dispersed
Bhi11g00925 Bhi-Chr11:28642454 Bhi11g00926 Bhi-Chr11:28642454 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2350 PF12165 Alfin 2.40E-68 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g00926 - - csv:101212601 488.419