Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01013 ACACAATAGACAAAGAAAAAACACAAAAGTTTGTAGCTGTTTAGGCATTGGAAGAGTTCAAAGACAGTTCTTCCTTTGTTTAAGAAAACCCTCTTTCCCTCCTTTCCTCCAAACCCTCAAACCCCCAAATTCAGTTTCTTCATCTTCATCCAGAACCCAATTCAGGATTCGCTTCTGTGAATCGCGAGCTTGTAGTTCGAAGGCACATGGGTACAAGAACACAGCAACCATGCCGAGAAGACGACGACGACGACCTCCCAAGTGGCCCTGGCGCCACCACAATTTCCGGTCAGTCTGTTTCAATGAGTGGCAGTGTGGGTTCTCCTTCTAGTCGCAGCGAGCAAACCATGGCAACGCCTGCCAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGACGAGGCAGGGTCGCAAGGACCCACTGCTAACGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGGGGCCTTCGCCAATTCAGCATGAAAGTTTGCGAGAAAGTGGAGAGTAAGGGAAGAACGACCTATAACGAGGTTGCAGATGAACTCGTTGCAGAATTTGCTGATCCTGGCAACAGTGTTGCATCGCCAGATCAGCAGCAACAGTACGATGAAAAAAATATCAGGCGAAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAAGAGATACAATGGAAGGGTCTGCCACGTACCAGCGTGAATGATATTGAAGAACTAAAGTCAGAGCGTCTTGGACTTAGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGTATGTAGGTCTTCAGAATCTAATACAGCGAAATGAACAGTTATTCAGTTCTGAGAATGCTCCCAGTGGTGGTGTGTCTTTGCCTTTCATCCTGGTGCAGACACGGCCTCATGCAACTGTTGAGATAGAAATTTCAGAAGATATGCAGCTGGTGCATTTTGACTTCAACAGTACTCCTTTTGAGCTCCATGACGACAACTATGTTCTGAAGGCAATGAAGTTTTGCGACAGACCACAGTGCGATAATACGGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCTCAGATCCCTCTTCCTTCAATGTCTAACACGCCGGTTAGAACTCCAACCTCCCCACCACTTCCTGGAATCATAAAAGCTCGCGTCAAGCACGAACATTAACGATTGGTTAGACCGAGCTTGAGTCTATGTGCATTAATCTCTGCATGATTGTATATTCTGCATGTTCTTACTGCTGTGGCCTTCTTCATTATTGCTGGATCATATAGAATGGTAGTTCACTGCATCAAACTTCATGCAATCAAATTCATTTAGCTTGGAACTGATTTAAGTCGTTGGCTGGCTTAGAGCTAATTCTTTGCTTCTGATGTTCTTTAACTTTTCTTTTTACTGTATCTGATTAGTCATATAATGTTCCTCTTCCTATTCCTCATCCTTCTTGTAGAAGTATAGATTTTAGATGTGTTGGATTGTGGAGGGTTGATTAAACTACAGATCATTACAGAATGAGTTAAACAATGCTGCGAATCTGTTTACCTTGTGTATAGAATTCTAGTTCAAATGGCAAATATTGTCTTATTATATTGTTTGAA 1684 43.47 MGTRTQQPCREDDDDDLPSGPGATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFLRLNNLDIHGDEAGSQGPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSVNDIEELKSERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQLFSSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDRPQCDNTAQNFTPDGGEGSSMSGMYQPPQIPLPSMSNTPVRTPTSPPLPGIIKARVKHEH 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30257554 30262705 - XM_039048957.1 Bhi11g01013 49725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01013 348 SUPERFAMILY Winged helix DNA-binding domain 95 177 IPR036390 -
Bhi11g01013 348 Pfam Transcription factor DP 184 291 IPR014889 -
Bhi11g01013 348 Gene3D - 88 181 IPR036388 -
Bhi11g01013 348 Coils Coil 192 226 - -
Bhi11g01013 348 PIRSF Txn_factor_DP 4 348 IPR015648 GO:0005667|GO:0051726
Bhi11g01013 348 Gene3D Transcription factor DP 182 304 IPR038168 -
Bhi11g01013 348 CDD DP_DD 181 284 IPR014889 -
Bhi11g01013 348 PANTHER TRANSCRIPTION FACTOR DP 24 348 IPR015648 GO:0005667|GO:0051726
Bhi11g01013 348 MobiDBLite consensus disorder prediction 22 60 - -
Bhi11g01013 348 MobiDBLite consensus disorder prediction 1 95 - -
Bhi11g01013 348 SMART E2F_TDP_2 92 176 IPR003316 GO:0005667|GO:0006355
Bhi11g01013 348 Pfam E2F/DP family winged-helix DNA-binding domain 95 176 IPR003316 GO:0005667|GO:0006355
Bhi11g01013 348 SMART DP_2 183 346 IPR014889 -
Bhi11g01013 348 SUPERFAMILY E2F-DP heterodimerization region 183 295 IPR037241 -
Bhi11g01013 348 PANTHER TRANSCRIPTION FACTOR DP 24 348 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01013 Bhi-Chr11:30257554 Bhi11g01014 Bhi-Chr11:30257554 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2352 PF08781 DP 4.30E-41 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01013 K04683 - csv:101216863 665.225