Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01014 CACAATAGACAAAGAAAAAACACAAAAGTTTGTAGCTGTTTAGGCATTGGAAGAGTTCAAAGACAGTTCTTCCTTTGTTTAAGAAAACCCTCTTTCCCTCCTTTCCTCCAAACCCTCAAACCCCCAAATTCAGTTTCTTCATCTTCATCCAGAACCCAATTCAGGATTCGCTTCTGTGAATCGCGAGCTTGTAGTTCGAAGGCACATGGGTACAAGAACACAGCAACCATGCCGAGAAGACGACGACGACGACCTCCCAAGTGGCCCTGGCGCCACCACAATTTCCGGTCAGTCTGTTTCAATGAGTGGCAGTGTGGGTTCTCCTTCTAGTCGCAGCGAGCAAACCATGGCAACGCCTGCCAGCGACAACACTTTTCTTCGATTGAACAACCTCGACATCCATGGCGACGAGGCAGGGTCGCAAGGACCCACTGCTAACGTGAAGAAAAAGAGGGGTCAGCGTGCTGTTGGAGGGGACAAGAGTGGAAGGGGCCTTCGCCAATTCAGCATGAAAGTTTGCGAGAAAGTGGAGAGTAAGGGAAGAACGACCTATAACGAGGTTGCAGATGAACTCGTTGCAGAATTTGCTGATCCTGGCAACAGTGTTGCATCGCCAGATCAGCAACAGTACGATGAAAAAAATATCAGGCGAAGGGTATATGATGCCCTGAATGTCCTCATGGCAATGGATATTATATCAAAGGATAAGAAAGAGATACAATGGAAGGGTCTGCCACGTACCAGCGTGAATGATATTGAAGAACTAAAGTCAGAGCGTCTTGGACTTAGAAATAGGATTGAAAAGAAAGCAGCATACTTGCAAGAGTTGGAGGAACAGTATGTAGGTCTTCAGAATCTAATACAGCGAAATGAACAGTTATTCAGTTCTGAGAATGCTCCCAGTGGTGGTGTGTCTTTGCCTTTCATCCTGGTGCAGACACGGCCTCATGCAACTGTTGAGATAGAAATTTCAGAAGATATGCAGCTGGTGCATTTTGACTTCAACAGTACTCCTTTTGAGCTCCATGACGACAACTATGTTCTGAAGGCAATGAAGTTTTGCGACAGACCACAGTGCGATAATACGGCACAAAATTTTACTCCTGATGGTGGGGAGGGTTCTAGCATGTCAGGCATGTATCAACCACCTCAGATCCCTCTTCCTTCAATGTCTAACACGCCGGTTAGAACTCCAACCTCCCCACCACTTCCTGGAATCATAAAAGCTCGCGTCAAGCACGAACATTAACGATTGGTTAGACCGAGCTTGAGTCTATGTGCATTAATCTCTGCATGATTGTATATTCTGCATGTTCTTACTGCTGTGGCCTTCTTCATTATTGCTGGATCATATAGAATGGTAGTTCACTGCATCAAACTTCATGCAATCAAATTCATTTAGCTTGGAACTGATTTAAGTCGTTGGCTGGCTTAGAGCTAATTCTTTGCTTCTGATGTTCTTTAACTTTTCTTTTTACTGTATCTGATTAGTCATATAATGTTCCTCTTCCTATTCCTCATCCTTCTTGTAGAAGTATAGATTTTAGATGTGTTGGATTGTGGAGGGTTGATTAAACTACAGATCATTACAGAATGAGTTAAACAATGCTGCGAATCTGTTTACCTTGTGTATAGAATTCTAGTTCAAATGGCAAATATTGTCTTATTATATTGTTTGAA 1680 43.45 MGTRTQQPCREDDDDDLPSGPGATTISGQSVSMSGSVGSPSSRSEQTMATPASDNTFLRLNNLDIHGDEAGSQGPTANVKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPGNSVASPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSVNDIEELKSERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQLFSSENAPSGGVSLPFILVQTRPHATVEIEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCDRPQCDNTAQNFTPDGGEGSSMSGMYQPPQIPLPSMSNTPVRTPTSPPLPGIIKARVKHEH 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30257554 30262704 - XM_039048958.1 Bhi11g01014 49726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01014 347 Pfam E2F/DP family winged-helix DNA-binding domain 95 175 IPR003316 GO:0005667|GO:0006355
Bhi11g01014 347 Gene3D - 88 180 IPR036388 -
Bhi11g01014 347 SMART DP_2 182 345 IPR014889 -
Bhi11g01014 347 PANTHER TRANSCRIPTION FACTOR DP 24 347 - -
Bhi11g01014 347 PIRSF Txn_factor_DP 4 347 IPR015648 GO:0005667|GO:0051726
Bhi11g01014 347 CDD DP_DD 180 283 IPR014889 -
Bhi11g01014 347 SMART E2F_TDP_2 92 175 IPR003316 GO:0005667|GO:0006355
Bhi11g01014 347 MobiDBLite consensus disorder prediction 22 60 - -
Bhi11g01014 347 Gene3D Transcription factor DP 181 303 IPR038168 -
Bhi11g01014 347 MobiDBLite consensus disorder prediction 1 95 - -
Bhi11g01014 347 SUPERFAMILY Winged helix DNA-binding domain 95 176 IPR036390 -
Bhi11g01014 347 Coils Coil 191 225 - -
Bhi11g01014 347 Pfam Transcription factor DP 183 290 IPR014889 -
Bhi11g01014 347 SUPERFAMILY E2F-DP heterodimerization region 182 294 IPR037241 -
Bhi11g01014 347 PANTHER TRANSCRIPTION FACTOR DP 24 347 IPR015648 GO:0005667|GO:0051726
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01013 Bhi-Chr11:30257554 Bhi11g01014 Bhi-Chr11:30257554 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2353 PF08781 DP 4.30E-41 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01014 K04683 - csv:101216863 669.848