Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g01040 TGTTAGAGTAAAAAGGAGAAAAAAAAAAATAAAAATAAACAAAAATCTCTCCCTCACGCGCAAGCACGCTTGAGTTTTTTTCTTCACGCGTCTGCCCTAACACCGCCGCCCACGTCTGCCAGATCTGAAGCCGCCAGCTTTCGTCTCGCCATCGAATCAGCCGCCGCAGCCGTTCACGTAAGCTCTAGACGACGTCGCGCCGCCACGCCTGAAGGTTTCGTCGCCGGCCGGTCGTGTCGCACGCCACAGGTCTGCCGAGCCGGGCGCCGATCTCCCTTCTCCGTTCGCCGCGTCGTTGCCGAGCCAGTCGCCTTCTGTCAGTTTCGTCCGCGCCACTCTTCTCCAACAAGCGGACGCCGCCGGATCTCTTCAGCCCAGACCACTCACCGCCCTCGGACGTCTTCGGCTCCTTCTCGTCAGATTTTGTTTTGATTTCGCCGGAATCCTTGATTTTGGTTATTTCCTTTTAACAGAAATGGCTGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCCGAAGAGGTTGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTGTTCCTAATATGAGAATGGATTCTCTGCATTTGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCAGAGTGGATGTCAGTGGAAAAGTTGACACAAATTTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAGATACTACCCTTCCATTACGTGGAAATATCAAAGCTTCTTTTTGACCATGCACGAGATGACGTTCCTGACATGTATTTGGTGAGGTCTCTTATTGAAGATATCAGGGATGTTAGGTTTCACAAAGTTGAAACCAGTTTGGAGTCAATTGATACACGCACATCTGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCATTCGTTGTTAGAGCACTGCAAGCAATTTACAAGCATGGAAATCCAGAGTTGGTTCCAGATCAAGATAGGATGACCAATGTGCAGCCACAAGGACACGATCACGGACAAAGACGACCTCTTCGAAGACGGTAGAGTTTGCGTCGATCTCGGTAGGTACGTTCTGATTTTGCTCAGCAGTGCTAAATGAAAGCCAGGATGGATTCTTCTTCAAAATCATTTAAAGGGTTTGCTTTTTTATTTTCTTATTCCAGCTAAGCTCTCTTGTAGGTCGTTCATTTATTACTAGAAAGTGCAGACATATCATGCTCGTGGTAGATTTGTTAGCATAATAGGCTAACTGTGGATGTACATGGAACCATGCAATGATATTTATTTACGATAGATGAAAGGTCAAAGATTCTTGTTTAATCCTCTAATTATTTCTCTATCA 1409 45.71 MAGQSDPHLNLFSAEEVEFVAEDEMVEIVPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRPPEWMSVEKLTQILEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVVRALQAIYKHGNPELVPDQDRMTNVQPQGHDHGQRRPLRRR 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30856690 30872187 + XM_039049190.1 Bhi11g01040 49752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g01040 211 CDD GINS_A_psf2 66 182 - -
Bhi11g01040 211 MobiDBLite consensus disorder prediction 185 211 - -
Bhi11g01040 211 Pfam GINS complex protein 53 162 IPR021151 -
Bhi11g01040 211 Gene3D - 78 190 - -
Bhi11g01040 211 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 194 IPR007257 GO:0005634|GO:0006260
Bhi11g01040 211 SUPERFAMILY PriA/YqbF domain 12 71 - -
Bhi11g01040 211 Gene3D - 12 77 - -
Bhi11g01040 211 SUPERFAMILY GINS helical bundle-like 73 182 IPR036224 -
Bhi11g01040 211 PIRSF GINS_PSF2 2 211 IPR007257 GO:0005634|GO:0006260
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g01038 Bhi-Chr11:30856689 Bhi11g01040 Bhi-Chr11:30856690 1.07E-158 dispersed
Bhi11g01039 Bhi-Chr11:30856690 Bhi11g01040 Bhi-Chr11:30856690 1.07E-158 tandem
Bhi11g01040 Bhi-Chr11:30856690 Bhi11g01041 Bhi-Chr11:30863398 1.58E-126 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g01040 K10733 - csv:101212053 410.609