Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g01050 | TTTTCTTTTTCTTTTTTTTTCTTTTTTTTGCCTCTTTTAGGTACATCACCCATTTCAGAAATTTGCCTTAAAACCATTCTATTCCCTTTCCTTTGTCCAGAAAAGGAAACCCATTTTTTCTTTCTCTCTAAAAATCCATTGCAGTACCTATTTATTTTATTTTATTTTTTAAAATTCTTACAGCAGAAACCCAGAAGGACAACATAGAAATACACGAGGTGTGTAAAAGATTGATCTTGTAATTTTGGGAGAGAAAAAAAAGAAGAAGAATGACAAGGCAAAAAATTCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACATTTTCAAAGAGGAGAAGAGGGCTATTCAAAAAAGCTCATGAACTTGCAACTCTTTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGAAAGCTTTTTGATTATTCTAGCTCAAGCATGTTGGAGTTACTAAGGAGACATAATATGCTACCCGAGCTGAATAACTTTAGCCAGCCTCCATCTCAGTTGGAAAAGAGTGCCTATGTTAAATTGACTGAGGAATTTGCAGCCAAGACCAAAGAACTTAGGCATATGAAGGGAGAGGAGCTTCAAGGACTTGGAATAGAAGAATTAAAGCAACTGGAGAAATTGCTTGAGATTGGTTTGAATCGTGTAATAGAGACCAAGGATGAAAAGTTTCTTAAAGAGATTGGTGCTGTGAAGGAGAAGATTGAAACTTTGAATGGAGATCAGCAAGAACAGCAAGCAGTGGCTGTTGTTGGTGGAAATTCTTTGGGGTCAAAGTCAAACACTAGCAATAGCAGCTCCTCAACAAACCCTAATTCTCAAGATTATGATGACATTTCTCTTAAATTGGGTCTTTGAAGGCACAAAGTTATGCACTTCCTTGGAGCAAACTTGGCAATGCAAAACTCAGCCTTTTCTCTAATGGAAGCTTTACTAATCTCATGGACTGCCAAAGCACATTCCTATTTGCATAGAGAAATTAAAAGGATGTGAAAAAGGCATGCATTAACTTAATCACCATGTACTTATTTCAATCCTAATTCATTTAATTTCATATATATGACATGTTTTCAATGTCAAAAAAGAGTTATATACCATGAATATTTACTGTTTCTTTCTGCATATCAATTGATTAAGAGTTGATATATA | 1172 | 34.81 | MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSSSMLELLRRHNMLPELNNFSQPPSQLEKSAYVKLTEEFAAKTKELRHMKGEELQGLGIEELKQLEKLLEIGLNRVIETKDEKFLKEIGAVKEKIETLNGDQQEQQAVAVVGGNSLGSKSNTSNSSSSTNPNSQDYDDISLKLGL | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31041730 | 31050467 | + | XM_039049566.1 | Bhi11g01050 | 49762 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g01050 | 203 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01050 | 203 | Pfam | K-box region | 87 | 159 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bhi11g01050 | 203 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01050 | 203 | ProSiteProfiles | K-box domain profile. | 83 | 166 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bhi11g01050 | 203 | MobiDBLite | consensus disorder prediction | 168 | 195 | - | - | |
Bhi11g01050 | 203 | PANTHER | MADS-BOX PROTEIN AGL24-LIKE ISOFORM X1 | 1 | 200 | - | - | |
Bhi11g01050 | 203 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01050 | 203 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 1 | 200 | - | - | |
Bhi11g01050 | 203 | SUPERFAMILY | SRF-like | 2 | 83 | IPR036879 | GO:0003677|GO:0046983 | |
Bhi11g01050 | 203 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01050 | 203 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01050 | 203 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01050 | 203 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi11g01050 | 203 | MobiDBLite | consensus disorder prediction | 168 | 203 | - | - | |
Bhi11g01050 | 203 | CDD | MADS_MEF2_like | 3 | 69 | IPR033896 | GO:0000977|GO:0045944 | |
Bhi11g01050 | 203 | Gene3D | - | 15 | 107 | IPR036879 | GO:0003677|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi11g01050 | Bhi-Chr11:31041730 | Bhi05g00942 | Bhi-Chr5:33019057 | 3.92E-62 | dispersed | |
Bhi11g01050 | Bhi-Chr11:31041730 | Bhi11g01051 | Bhi-Chr11:31041734 | 7.10E-145 | tandem | |
Bhi11g01050 | Bhi-Chr11:31041730 | Bhi05g00939 | Bhi-Chr5:33019054 | 2.18E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2354 | PF01486 | K-box | 1.20E-12 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g01050 | - | - | csv:101223132 | 276.559 |